Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_578.g16729 Utricularia gibba HOM05D000196 ORTHO05D030709 3.0e-173 612.5 383 100.0
unitig_747.g21517 Utricularia gibba HOM05D000196 ORTHO05D030709 4.8e-46 189.9 208 54.8
unitig_747.g21518 Utricularia gibba HOM05D000196 ORTHO05D030709 2.5e-34 151.0 190 50.0
Sabra01G0115000 Salix brachista HOM05D001783 ORTHO05D005379 4.0e-08 63.9 187 30.5
Nn6g33664 Nelumbo nucifera HOM05D001783 ORTHO05D005379 2.0e-07 61.6 186 27.4
EL10Ac7g17592 Beta vulgaris HOM05D000196 ORTHO05D000279 3.4e-07 60.8 91 40.7
Gohir.A05G005450 Gossypium hirsutum HOM05D000196 ORTHO05D020568 3.4e-07 60.8 173 26.6
Thecc.10G113300 Theobroma cacao HOM05D000196 ORTHO05D020568 4.4e-07 60.5 79 40.5
Gorai.009G006200 Gossypium raimondii HOM05D000196 ORTHO05D020568 7.5e-07 59.7 173 26.0
HPP92_015847 Vanilla planifolia HOM05D000196 ORTHO05D000279 9.8e-07 59.3 72 45.8
Lsat_1_v5_gn_8_42300 Lactuca sativa HOM05D024335 ORTHO05D025296 1.3e-06 58.9 63 49.2
DCAR_018916 Daucus carota HOM05D000196 ORTHO05D000279 1.7e-06 58.5 103 39.8
Medtr3g086100 Medicago truncatula HOM05D000196 ORTHO05D000279 1.7e-06 58.5 100 36.0
Glyma.11G246400 Glycine max HOM05D000196 ORTHO05D000279 2.2e-06 58.2 120 33.3
Gohir.A08G251200 Gossypium hirsutum HOM05D000196 ORTHO05D000279 2.2e-06 58.2 76 40.8
RcHm_v2.0_Chr4g0442781 Rosa chinensis HOM05D000196 ORTHO05D000279 2.2e-06 58.2 139 36.0
SalBow7G1194 Salvia bowleyana HOM05D001783 ORTHO05D003692 2.2e-06 58.2 189 30.7
Ca_24635_v3 Cicer arietinum L. HOM05D001783 ORTHO05D005379 2.9e-06 57.8 166 30.1
Ciclev10007648m.g Citrus clementina HOM05D000196 ORTHO05D000279 2.9e-06 57.8 76 44.7
Thhalv10024919m.g Eutrema salsugineum HOM05D001783 ORTHO05D005379 2.9e-06 57.8 112 35.7
Os01g0904700 Oryza sativa ssp. japonica HOM05D000196 ORTHO05D000279 2.9e-06 57.8 104 34.6
TPR.G33365 Trifolium pratense HOM05D000196 ORTHO05D000279 2.9e-06 57.8 124 32.3
BcaNung00035 Brassica carinata HOM05D000087 ORTHO05D005379 3.7e-06 57.4 129 31.0
MELO3C010245.2 Cucumis melo HOM05D000196 ORTHO05D000279 3.7e-06 57.4 83 42.2
CsaV3_1G028690 Cucumis sativus L. HOM05D000196 ORTHO05D000279 3.7e-06 57.4 83 42.2
ECA236G0441 Erigeron canadensis HOM05D000196 ORTHO05D022485 3.7e-06 57.4 106 35.8
Medtr1g032570 Medicago truncatula HOM05D000196 ORTHO05D000279 3.7e-06 57.4 112 33.0
Sc14g0000010 Simmondsia chinensis HOM05D000196 ORTHO05D000279 3.7e-06 57.4 79 43.0
Sc14g0009300 Simmondsia chinensis HOM05D000196 ORTHO05D000279 3.7e-06 57.4 79 43.0
arahy.Tifrunner.gnm1.ann1.F8U6QL Arachis hypogaea HOM05D001783 ORTHO05D005379 4.9e-06 57.0 144 32.6
arahy.Tifrunner.gnm1.ann1.LEG0TK Arachis hypogaea HOM05D001783 ORTHO05D005379 4.9e-06 57.0 144 32.6
BcaC09g51558 Brassica carinata HOM05D001783 ORTHO05D005379 4.9e-06 57.0 110 32.7
CAN.G484.53 Capsicum annuum HOM05D000196 ORTHO05D000279 4.9e-06 57.0 87 41.4
HPP92_015846 Vanilla planifolia HOM05D000196 ORTHO05D000279 4.9e-06 57.0 72 44.4
Ah.16g102510 Amaranthus hybridus HOM05D000196 ORTHO05D001288 6.4e-06 56.6 72 41.7
arahy.Tifrunner.gnm1.ann1.UB10Y8 Arachis hypogaea HOM05D001783 ORTHO05D005379 6.4e-06 56.6 88 43.2
Thhalv10015296m.g Eutrema salsugineum HOM05D000196 ORTHO05D000279 6.4e-06 56.6 99 35.4
Medtr4g078810 Medicago truncatula HOM05D001783 ORTHO05D003692 6.4e-06 56.6 180 28.3
MCO04G379 Micromonas commoda HOM05D000196 ORTHO05D000279 6.4e-06 56.6 76 42.1
Sabra08G0138200 Salix brachista HOM05D000196 ORTHO05D000279 6.4e-06 56.6 106 33.0
Sp6g19750 Schrenkiella parvula HOM05D000196 ORTHO05D000279 6.4e-06 56.6 101 34.7
Sed0014906 Sechium edule HOM05D000196 ORTHO05D000279 6.4e-06 56.6 81 42.0
Sopen06g021230 Solanum pennellii HOM05D001783 ORTHO05D005379 6.4e-06 56.6 143 32.9
TPR.G27537 Trifolium pratense HOM05D001783 ORTHO05D005379 6.4e-06 56.6 105 37.1
AL5G45420 Arabidopsis lyrata HOM05D000196 ORTHO05D015337 8.3e-06 56.2 99 39.4
arahy.Tifrunner.gnm1.ann1.D788HE Arachis hypogaea HOM05D001783 ORTHO05D005379 8.3e-06 56.2 88 42.0
Thhalv10022243m.g Eutrema salsugineum HOM05D000196 ORTHO05D011867 8.3e-06 56.2 65 47.7
THA.LOC104827744 Tarenaya hassleriana HOM05D001783 ORTHO05D005379 8.3e-06 56.2 75 42.7
Thecc.09G170400 Theobroma cacao HOM05D000196 ORTHO05D020568 8.3e-06 56.2 77 40.3
VMungo1127G2042 Vigna mungo HOM05D000196 ORTHO05D012687 8.3e-06 56.2 83 38.6


User provided reference genes

Program Settings