Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_578.g16692 Utricularia gibba HOM05D001393 ORTHO05D007477 0.0e+00 1533.5 776 100.0
SGA_v2.0_scaffold5G02964 Striga asiatica HOM05D001393 ORTHO05D007477 8.9e-100 369.0 856 34.2
MSTRG.28063 Avicennia marina HOM05D001393 ORTHO05D007477 1.7e-98 364.8 879 34.9
Migut.N01605 Erythranthe guttata HOM05D001393 ORTHO05D007477 2.5e-94 350.9 851 35.5
MSTRG.5028 Avicennia marina HOM05D001393 ORTHO05D007477 1.2e-88 332.0 883 33.2
SalBow7G4183 Salvia bowleyana HOM05D001393 ORTHO05D007477 1.6e-88 331.6 817 34.9
Oeu049495.1 Olea europaea HOM05D001393 ORTHO05D007477 2.5e-78 297.7 887 32.5
Actinidia21547 Actinidia chinensis HOM05D001393 ORTHO05D007477 2.2e-74 284.6 869 32.3
vmacro13675 Vaccinium macrocarpon HOM05D001393 ORTHO05D007477 9.3e-73 279.3 871 30.8
CSS0038724 Camellia sinensis var. sinensis HOM05D001393 ORTHO05D007477 2.4e-68 264.6 540 35.6
Cfa010777 Carpinus fangiana HOM05D001393 ORTHO05D007477 1.5e-67 261.9 836 31.2
Dinv09348 Davidia involucrata HOM05D001393 ORTHO05D007477 3.4e-67 260.8 541 36.0
PGSC0003DMG401023992 Solanum tuberosum HOM05D001393 ORTHO05D007477 1.9e-65 255.0 817 29.7
Sopen11g002980 Solanum pennellii HOM05D001393 ORTHO05D007477 7.9e-64 249.6 794 30.0
Atru.chr11.2612 Acer truncatum HOM05D001393 ORTHO05D007477 5.6e-62 243.4 832 29.8
Ciclev10030722m.g Citrus clementina HOM05D001393 ORTHO05D007477 2.8e-61 241.1 806 30.1
Solyc11g007060.2 Solanum lycopersicum HOM05D001393 ORTHO05D007477 6.2e-61 240.0 781 30.6
CAN.G1513.5 Capsicum annuum HOM05D001393 ORTHO05D007477 1.4e-60 238.8 804 28.4
QL04p008271 Quercus lobata HOM05D001393 ORTHO05D007477 2.4e-60 238.0 783 30.8
SalBow6G6124 Salvia bowleyana HOM05D001393 ORTHO05D007477 2.4e-60 238.0 448 40.0
Thecc.01G409700 Theobroma cacao HOM05D001393 ORTHO05D007477 9.0e-60 236.1 821 29.5
FAN06G3336 Fragaria x ananassa HOM05D001393 ORTHO05D007477 3.4e-59 234.2 837 30.3
FvH4_7g01170 Fragaria vesca HOM05D001393 ORTHO05D007477 1.3e-58 232.3 859 29.9
TWI73G0713 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 1.3e-58 232.3 514 34.0
Cc02_g28120 Coffea canephora HOM05D001393 ORTHO05D007477 2.9e-58 231.1 496 35.9
FAN03G3510 Fragaria x ananassa HOM05D001393 ORTHO05D007477 3.8e-58 230.7 850 29.3
DCAR_029678 Daucus carota HOM05D001393 ORTHO05D007477 6.4e-58 229.9 685 32.7
CiPaw.14G000700 Carya illinoinensis HOM05D001393 ORTHO05D007477 1.1e-57 229.2 858 29.4
COL.COLO4_04862 Corchorus olitorius HOM05D001393 ORTHO05D007477 2.1e-56 224.9 894 27.4
RcHm_v2.0_Chr1g0316471 Rosa chinensis HOM05D001393 ORTHO05D007477 6.0e-56 223.4 854 28.9
Prupe.2G015000 Prunus persica HOM05D001393 ORTHO05D007477 1.0e-55 222.6 861 28.1
Manes.10G141000 Manihot esculenta HOM05D001393 ORTHO05D007477 1.8e-55 221.9 801 30.0
Cpa.g.sc125.11 Carica papaya HOM05D001393 ORTHO05D007477 2.3e-55 221.5 781 29.6
Potri.001G265100 Populus trichocarpa HOM05D001393 ORTHO05D007477 3.0e-55 221.1 859 28.5
PGR044G2234 Punica granatum HOM05D001393 ORTHO05D007477 8.7e-55 219.5 822 29.2
GSVIVG01032121001 Vitis vinifera HOM05D001393 ORTHO05D007477 8.7e-55 219.5 785 29.4
CANSAT80G1121 Cannabis sativa HOM05D001393 ORTHO05D007477 1.5e-54 218.8 833 28.3
FAN03G1765 Fragaria x ananassa HOM05D001393 ORTHO05D007477 2.5e-54 218.0 873 28.5
Nn2g15307 Nelumbo nucifera HOM05D001393 ORTHO05D007477 4.3e-54 217.2 931 27.0
Sc11g0009120 Simmondsia chinensis HOM05D001393 ORTHO05D007477 4.3e-54 217.2 840 27.6
MD02G1309200 Malus domestica HOM05D001393 ORTHO05D007477 7.4e-54 216.5 859 29.6
TWI09G0484 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 2.8e-53 214.5 513 33.1
Duzib133G0545 Durio zibethinus HOM05D001393 ORTHO05D007477 4.8e-53 213.8 821 28.7
TAR623G0231 Trochodendron aralioides HOM05D001393 ORTHO05D007477 2.4e-52 211.5 542 33.2
Gohir.A08G143900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 3.4e-51 207.6 826 28.6
FAN01G2686 Fragaria x ananassa HOM05D001393 ORTHO05D007477 5.8e-51 206.8 844 28.1
Nitab4.5_0001761g0330 Nicotiana tabacum HOM05D001393 ORTHO05D007477 1.3e-50 205.7 833 26.3
Gohir.D08G164900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 1.7e-50 205.3 776 28.6
Gorai.004G171900 Gossypium raimondii HOM05D001393 ORTHO05D007477 2.9e-50 204.5 782 28.4
Potri.009G060000 Populus trichocarpa HOM05D001393 ORTHO05D007477 6.5e-50 203.4 519 33.3
AUR62023073 Chenopodium quinoa HOM05D001393 ORTHO05D007477 1.9e-49 201.8 858 25.6
Nitab4.5_0000001g0230 Nicotiana tabacum HOM05D001393 ORTHO05D007477 4.2e-49 200.7 790 26.7
Sabra16G0162900 Salix brachista HOM05D001393 ORTHO05D007477 2.1e-48 198.4 869 27.8
Sed0015725 Sechium edule HOM05D001393 ORTHO05D007477 6.7e-47 193.4 808 26.6
Eucgr.J01280 Eucalyptus grandis HOM05D001393 ORTHO05D007477 1.1e-46 192.6 843 27.9
Glyma.09G228900 Glycine max HOM05D001393 ORTHO05D007477 1.5e-46 192.2 874 27.0
ClCG09G004070 Citrullus lanatus HOM05D001393 ORTHO05D007477 1.9e-46 191.8 823 27.2
Medtr4g037495 Medicago truncatula HOM05D001393 ORTHO05D007477 1.3e-45 189.1 843 27.5
EL10Ac2g04339 Beta vulgaris HOM05D001393 ORTHO05D007477 2.8e-45 188.0 810 25.9
CsaV3_7G030970 Cucumis sativus L. HOM05D001393 ORTHO05D007477 2.8e-45 188.0 819 26.7
TPR.G3660 Trifolium pratense HOM05D001393 ORTHO05D007477 3.7e-45 187.6 844 27.1
Psat7g196360 Pisum sativum HOM05D001393 ORTHO05D007477 1.8e-44 185.3 814 26.7
HanXRQChr09g0251311 Helianthus annuus HOM05D001393 ORTHO05D007477 5.3e-44 183.7 487 32.2
Glyma.12G007700 Glycine max HOM05D001393 ORTHO05D007477 9.0e-44 183.0 877 26.0
MELO3C023559.2 Cucumis melo HOM05D001393 ORTHO05D007477 1.2e-43 182.6 485 32.2
Aqoxy1G00280 Aquilegia oxysepala HOM05D001393 ORTHO05D007477 2.6e-43 181.4 588 30.4
MBI04_g36081_MAGBIO Magnolia biondii HOM05D001393 ORTHO05D007477 5.9e-43 180.3 570 30.2
Ca_19581_v3 Cicer arietinum L. HOM05D001393 ORTHO05D007477 7.7e-43 179.9 849 27.6
Dinv43433 Davidia involucrata HOM05D001393 ORTHO05D007477 1.1e-41 176.0 209 48.3
AUR62009391 Chenopodium quinoa HOM05D001393 ORTHO05D007477 1.9e-41 175.3 836 26.4
Lj3g0000057 Lotus japonicus HOM05D001393 ORTHO05D007477 1.2e-40 172.6 848 26.2
CARHR184320 Cardamine hirsuta HOM05D001393 ORTHO05D007477 2.1e-40 171.8 480 30.8
PSO339G5226 Papaver somniferum HOM05D001393 ORTHO05D007477 3.6e-40 171.0 426 31.7
Hund21482 Selenicereus undatus HOM05D001393 ORTHO05D007477 6.1e-40 170.2 805 25.8
arahy.Tifrunner.gnm1.ann1.S6CP9J Arachis hypogaea HOM05D001393 ORTHO05D007477 7.9e-40 169.9 863 27.1
Aa31LG11G7400 Aethionema arabicum HOM05D001393 ORTHO05D007477 1.8e-39 168.7 739 27.1
arahy.Tifrunner.gnm1.ann1.C4Q3NJ Arachis hypogaea HOM05D001393 ORTHO05D007477 2.3e-39 168.3 862 27.0
Carub.0008s0749 Capsella rubella HOM05D001393 ORTHO05D007477 2.3e-39 168.3 762 27.0
PSO384G0142 Papaver somniferum HOM05D001393 ORTHO05D007477 5.1e-39 167.2 424 32.3
MD07G1012500 Malus domestica HOM05D001393 ORTHO05D007477 1.5e-38 165.6 487 30.2
Lsat_1_v5_gn_1_106561 Lactuca sativa HOM05D001393 ORTHO05D007477 2.5e-38 164.9 585 29.2
Peaxi162Scf00152g01336 Petunia axillaris HOM05D001393 ORTHO05D007477 2.5e-38 164.9 591 27.7
Sabra09G0044200 Salix brachista HOM05D001393 ORTHO05D007477 5.7e-38 163.7 520 32.1
VMungo1127G2137 Vigna mungo HOM05D001393 ORTHO05D007477 2.8e-37 161.4 562 28.3
AT5G47940 Arabidopsis thaliana HOM05D001393 ORTHO05D007477 1.1e-36 159.5 520 28.1
A06p39440 Brassica napus HOM05D001393 ORTHO05D007477 4.1e-36 157.5 524 29.2
BraA06t26859Z Brassica rapa HOM05D001393 ORTHO05D007477 4.1e-36 157.5 524 29.2
Thhalv10003674m.g Eutrema salsugineum HOM05D001393 ORTHO05D007477 1.2e-35 156.0 753 27.4
Phvul.011G009600 Phaseolus vulgaris HOM05D001393 ORTHO05D007477 1.0e-34 152.9 883 25.1
Sp2g18440 Schrenkiella parvula HOM05D001393 ORTHO05D007477 2.2e-34 151.8 763 25.8
AL8G20040 Arabidopsis lyrata HOM05D001393 ORTHO05D007477 5.0e-34 150.6 777 27.0
C07p38830 Brassica napus HOM05D001393 ORTHO05D007477 9.4e-33 146.4 520 28.3
BolC7t44402H Brassica oleracea HOM05D001393 ORTHO05D007477 3.6e-32 144.4 521 28.0
CDE05G0268 Ceratophyllum demersum HOM05D001393 ORTHO05D007477 1.3e-29 136.0 399 29.6
FAN10G3273 Fragaria x ananassa HOM05D001393 ORTHO05D007477 5.3e-28 130.6 162 46.3
Zm00001eb324710 Zea mays HOM05D001393 ORTHO05D007477 1.2e-27 129.4 500 28.2
Lalb_Chr19g0140311 Lupinus albus HOM05D001393 ORTHO05D007477 2.0e-27 128.6 875 22.6
ATR0332G069 Amborella trichopoda HOM05D001393 ORTHO05D007477 2.2e-26 125.2 574 27.2
BcaC06g30834 Brassica carinata HOM05D001393 ORTHO05D007477 1.9e-25 122.1 492 27.8
Zm00001eb107220 Zea mays HOM05D001393 ORTHO05D007477 5.5e-25 120.6 429 28.4
HPP92_026649 Vanilla planifolia HOM05D001393 ORTHO05D007477 7.4e-22 110.2 205 37.6
HPP92_015712 Vanilla planifolia HOM05D001393 ORTHO05D007477 1.3e-21 109.4 206 38.3
Os07g0569000 Oryza sativa ssp. japonica HOM05D001393 ORTHO05D007477 2.8e-21 108.2 213 36.6
ECA248G1228 Erigeron canadensis HOM05D001393 ORTHO05D007477 3.2e-17 94.7 363 29.2
Lj9A633T62 Lonicera japonica HOM05D001393 ORTHO05D007477 9.7e-14 83.2 655 23.4
Ah.10g038800 Amaranthus hybridus HOM05D001393 ORTHO05D007477 3.7e-13 81.3 463 25.3
SEGI_04113 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 1.3e-10 72.8 109 40.4
SEGI_08002 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 1.3e-10 72.8 109 40.4
Duzib138G1437 Durio zibethinus HOM05D001393 ORTHO05D007477 3.2e-09 68.2 572 23.3
SEGI_29291 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 1.2e-06 59.7 305 23.9
Mapoly0003s0122 Marchantia polymorpha HOM05D020720 ORTHO05D007477 5.7e-06 57.4 150 29.3


User provided reference genes

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