Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_578.g16647 Utricularia gibba HOM05D003479 ORTHO05D004659 4.8e-307 1057.0 531 100.0
Migut.D00003 Erythranthe guttata HOM05D003479 ORTHO05D004659 3.8e-235 818.1 531 78.0
SGA_v2.0_scaffold80G25672 Striga asiatica HOM05D003479 ORTHO05D004659 5.3e-229 797.7 531 75.7
Dinv12068 Davidia involucrata HOM05D003479 ORTHO05D004659 1.7e-219 766.1 531 73.3
CANSAT25G3435 Cannabis sativa HOM05D003479 ORTHO05D004659 2.2e-219 765.8 531 73.4
Cc01_g21710 Coffea canephora HOM05D003479 ORTHO05D004659 2.9e-219 765.4 533 73.7
Solyc01g068590.4 Solanum lycopersicum HOM05D003479 ORTHO05D004659 4.2e-218 761.5 531 72.5
MD17G1285800 Malus domestica HOM05D003479 ORTHO05D004659 7.2e-218 760.8 531 72.9
Nitab4.5_0001628g0060 Nicotiana tabacum HOM05D003479 ORTHO05D004659 9.4e-218 760.4 533 72.2
Actinidia06417 Actinidia chinensis HOM05D003479 ORTHO05D004659 1.2e-217 760.0 535 72.1
GSVIVG01028271001 Vitis vinifera HOM05D003479 ORTHO05D004659 1.6e-217 759.6 531 72.9
Nitab4.5_0002103g0090 Nicotiana tabacum HOM05D003479 ORTHO05D004659 2.1e-217 759.2 530 71.9
COL.COLO4_23088 Corchorus olitorius HOM05D003479 ORTHO05D004659 2.7e-217 758.8 530 72.5
Ciclev10018541m.g Citrus clementina HOM05D003479 ORTHO05D004659 4.7e-217 758.1 531 72.3
Rhsim01G0001400 Rhododendron simsii HOM05D003479 ORTHO05D004659 4.7e-217 758.1 531 71.4
Gorai.004G148300 Gossypium raimondii HOM05D003479 ORTHO05D004659 1.4e-216 756.5 530 72.3
Thecc.01G328500 Theobroma cacao HOM05D003479 ORTHO05D004659 1.8e-216 756.1 532 72.2
Manes.01G236800 Manihot esculenta HOM05D003479 ORTHO05D004659 2.3e-216 755.7 531 72.3
Sopen01g030540 Solanum pennellii HOM05D003479 ORTHO05D004659 3.0e-216 755.4 531 72.1
Gohir.D08G143700 Gossypium hirsutum HOM05D003479 ORTHO05D004659 3.9e-216 755.0 530 72.3
Gohir.A08G122400 Gossypium hirsutum HOM05D003479 ORTHO05D004659 5.1e-216 754.6 530 72.3
Cfa004931 Carpinus fangiana HOM05D003479 ORTHO05D004659 1.5e-215 753.1 533 72.2
Prupe.3G000300 Prunus persica HOM05D003479 ORTHO05D004659 1.5e-215 753.1 532 72.2
CSS0000124 Camellia sinensis var. sinensis HOM05D003479 ORTHO05D004659 2.0e-215 752.7 531 71.6
Duzib138G1436 Durio zibethinus HOM05D003479 ORTHO05D004659 2.0e-215 752.7 532 71.4
TAR636G1704 Trochodendron aralioides HOM05D003479 ORTHO05D004659 1.3e-214 750.0 533 71.9
Cpa.g.sc57.54 Carica papaya HOM05D003479 ORTHO05D004659 1.7e-214 749.6 541 70.2
Hund11617 Selenicereus undatus HOM05D003479 ORTHO05D004659 2.8e-214 748.8 530 71.1
RcHm_v2.0_Chr3g0485491 Rosa chinensis HOM05D003479 ORTHO05D004659 6.3e-214 747.7 528 72.2
Gorai.004G044600 Gossypium raimondii HOM05D003479 ORTHO05D004659 8.2e-214 747.3 530 70.8
Eucgr.K00546 Eucalyptus grandis HOM05D003479 ORTHO05D004659 1.8e-213 746.1 540 70.7
Gohir.D08G045832 Gossypium hirsutum HOM05D003479 ORTHO05D004659 2.4e-213 745.7 531 70.2
FvH4_1g26030 Fragaria vesca HOM05D003479 ORTHO05D004659 9.1e-213 743.8 528 71.6
FAN19G1496 Fragaria x ananassa HOM05D003479 ORTHO05D004659 9.1e-213 743.8 532 71.2
vmacro02352 Vaccinium macrocarpon HOM05D003479 ORTHO05D004659 9.1e-213 743.8 533 70.5
Gohir.A08G035200 Gossypium hirsutum HOM05D003479 ORTHO05D004659 1.2e-212 743.4 531 69.9
Potri.014G109900 Populus trichocarpa HOM05D003479 ORTHO05D004659 1.2e-212 743.4 532 71.6
Ca_09257_v3 Cicer arietinum L. HOM05D003479 ORTHO05D004659 3.5e-212 741.9 530 70.6
FAN23G1814 Fragaria x ananassa HOM05D003479 ORTHO05D004659 3.5e-212 741.9 532 71.1
FAN23G2105 Fragaria x ananassa HOM05D003479 ORTHO05D004659 3.5e-212 741.9 528 71.4
Peaxi162Scf00309g00510 Petunia axillaris HOM05D003479 ORTHO05D004659 3.5e-212 741.9 531 70.2
Phvul.001G220000 Phaseolus vulgaris HOM05D003479 ORTHO05D004659 3.5e-212 741.9 533 70.5
TWI14G0833 Tripterygium wilfordii HOM05D003479 ORTHO05D004659 4.5e-212 741.5 531 71.4
Eucgr.K00763 Eucalyptus grandis HOM05D003479 ORTHO05D004659 5.9e-212 741.1 540 70.0
EL10As5g23623 Beta vulgaris HOM05D003479 ORTHO05D004659 1.3e-211 740.0 532 69.4
Atru.chr5.824 Acer truncatum HOM05D003479 ORTHO05D004659 1.7e-211 739.6 539 71.2
Nn4g25261 Nelumbo nucifera HOM05D003479 ORTHO05D004659 2.9e-211 738.8 534 70.4
HanXRQChr15g0464511 Helianthus annuus HOM05D003479 ORTHO05D004659 3.8e-211 738.4 535 70.7
PSO357G0518 Papaver somniferum HOM05D003479 ORTHO05D004659 3.8e-211 738.4 542 69.2
CiPaw.08G080000 Carya illinoinensis HOM05D003479 ORTHO05D004659 5.0e-211 738.0 532 70.1
AUR62011690 Chenopodium quinoa HOM05D003479 ORTHO05D004659 5.0e-211 738.0 532 69.7
FAN28G1829 Fragaria x ananassa HOM05D003479 ORTHO05D004659 5.0e-211 738.0 528 71.0
Medtr7g111030 Medicago truncatula HOM05D003479 ORTHO05D004659 5.0e-211 738.0 533 70.0
Potri.002G184400 Populus trichocarpa HOM05D003479 ORTHO05D004659 8.5e-211 737.3 534 70.6
VMungo1383G0820 Vigna mungo HOM05D003479 ORTHO05D004659 1.5e-210 736.5 530 70.2
FAN26G2262 Fragaria x ananassa HOM05D003479 ORTHO05D004659 2.5e-210 735.7 528 70.6
PSO170G1939 Papaver somniferum HOM05D003479 ORTHO05D004659 5.5e-210 734.6 542 69.0
Aqoxy5G02886 Aquilegia oxysepala HOM05D003479 ORTHO05D004659 7.2e-210 734.2 545 68.8
Glyma.19G223200 Glycine max HOM05D003479 ORTHO05D004659 9.4e-210 733.8 532 70.1
Gorai.007G115700 Gossypium raimondii HOM05D003479 ORTHO05D004659 9.4e-210 733.8 530 70.6
Sc05g0000020 Simmondsia chinensis HOM05D003479 ORTHO05D004659 1.2e-209 733.4 534 69.7
DCAR_018236 Daucus carota HOM05D003479 ORTHO05D004659 1.6e-209 733.0 531 69.7
Sabra14G0081100 Salix brachista HOM05D003479 ORTHO05D004659 1.6e-209 733.0 532 70.3
TPR.G3092 Trifolium pratense HOM05D003479 ORTHO05D004659 2.1e-209 732.6 533 69.6
Gohir.D11G107800 Gossypium hirsutum HOM05D003479 ORTHO05D004659 2.7e-209 732.3 530 70.6
THA.LOC104817410 Tarenaya hassleriana HOM05D003479 ORTHO05D004659 2.7e-209 732.3 534 69.5
Glyma.03G226200 Glycine max HOM05D003479 ORTHO05D004659 6.1e-209 731.1 530 69.1
Psat3g015760 Pisum sativum HOM05D003479 ORTHO05D004659 6.1e-209 731.1 533 69.6
Lalb_Chr04g0260231 Lupinus albus HOM05D003479 ORTHO05D004659 8.0e-209 730.7 533 69.0
Gohir.A11G103400 Gossypium hirsutum HOM05D003479 ORTHO05D004659 1.0e-208 730.3 530 70.6
Lju2566C1G2 Lonicera japonica HOM05D003479 ORTHO05D004659 1.8e-208 729.6 530 70.0
MBI18_g03887_MAGBIO Magnolia biondii HOM05D003479 ORTHO05D004659 1.8e-208 729.6 533 69.2
CiPaw.07G128000 Carya illinoinensis HOM05D003479 ORTHO05D004659 8.8e-208 727.2 532 69.7
ECA247G3194 Erigeron canadensis HOM05D003479 ORTHO05D004659 8.8e-208 727.2 526 70.9
Carub.0005s2876 Capsella rubella HOM05D003479 ORTHO05D004659 1.1e-207 726.9 534 69.3
Glyma.20G089300 Glycine max HOM05D003479 ORTHO05D004659 1.1e-207 726.9 533 69.0
arahy.Tifrunner.gnm1.ann1.37N44H Arachis hypogaea HOM05D003479 ORTHO05D004659 2.6e-207 725.7 533 69.6
QL09p037617 Quercus lobata HOM05D003479 ORTHO05D004659 2.6e-207 725.7 516 71.3
DCAR_012290 Daucus carota HOM05D003479 ORTHO05D004659 4.4e-207 724.9 534 69.1
Lsat_1_v5_gn_9_7140 Lactuca sativa HOM05D003479 ORTHO05D004659 5.7e-207 724.5 530 70.8
Lalb_Chr18g0046291 Lupinus albus HOM05D003479 ORTHO05D004659 9.7e-207 723.8 535 69.0
Ca_10221_v3 Cicer arietinum L. HOM05D003479 ORTHO05D004659 1.3e-206 723.4 534 69.5
Lj5g0020342 Lotus japonicus HOM05D003479 ORTHO05D004659 1.3e-206 723.4 533 69.6
THA.LOC104802111 Tarenaya hassleriana HOM05D003479 ORTHO05D004659 1.7e-206 723.0 534 68.7
CARHR172360 Cardamine hirsuta HOM05D003479 ORTHO05D004659 2.8e-206 722.2 532 68.6
AL5G44630 Arabidopsis lyrata HOM05D003479 ORTHO05D004659 3.7e-206 721.8 532 69.2
AT3G62010 Arabidopsis thaliana HOM05D003479 ORTHO05D004659 3.7e-206 721.8 532 68.6
Oeu052594.2 Olea europaea HOM05D003479 ORTHO05D004659 8.2e-206 720.7 537 70.2
Psat6g157360 Pisum sativum HOM05D003479 ORTHO05D004659 8.2e-206 720.7 533 69.4
CsaV3_6G000310 Cucumis sativus L. HOM05D003479 ORTHO05D004659 1.4e-205 719.9 533 70.2
Medtr1g085300 Medicago truncatula HOM05D003479 ORTHO05D004659 1.4e-205 719.9 533 69.0
Glyma.10G140500 Glycine max HOM05D003479 ORTHO05D004659 1.2e-204 716.8 541 67.7
Thhalv10005753m.g Eutrema salsugineum HOM05D003479 ORTHO05D004659 5.9e-204 714.5 532 68.4
arahy.Tifrunner.gnm1.ann1.RIE5PZ Arachis hypogaea HOM05D003479 ORTHO05D004659 8.5e-203 710.7 557 66.4
Sp5g01350 Schrenkiella parvula HOM05D003479 ORTHO05D004659 1.1e-202 710.3 532 67.9
A09p54080 Brassica napus HOM05D003479 ORTHO05D004659 2.5e-202 709.1 532 68.0
BraA09t40821Z Brassica rapa HOM05D003479 ORTHO05D004659 2.5e-202 709.1 532 68.0
BolC8t51274H Brassica oleracea HOM05D003479 ORTHO05D004659 5.5e-202 708.0 532 67.7
Sed0010094 Sechium edule HOM05D003479 ORTHO05D004659 1.6e-201 706.4 534 68.2
BcaC07g40697 Brassica carinata HOM05D003479 ORTHO05D004659 2.1e-201 706.1 532 67.7
C08p36970 Brassica napus HOM05D003479 ORTHO05D004659 2.1e-201 706.1 532 67.7
MELO3C021223.2 Cucumis melo HOM05D003479 ORTHO05D004659 2.1e-201 706.1 538 69.0
Ah.02g112690 Amaranthus hybridus HOM05D003479 ORTHO05D004659 4.1e-197 691.8 505 67.5
ATR0693G109 Amborella trichopoda HOM05D003479 ORTHO05D004659 2.0e-196 689.5 530 66.2
Aa31LG10G15990 Aethionema arabicum HOM05D003479 ORTHO05D004659 4.2e-194 681.8 557 63.7
Gohir.D08G045766 Gossypium hirsutum HOM05D003479 ORTHO05D004659 1.2e-193 680.2 531 66.1
QL09p037594 Quercus lobata HOM05D003479 ORTHO05D004659 6.1e-193 677.9 526 67.1
Os03g0586700 Oryza sativa ssp. japonica HOM05D003479 ORTHO05D004659 1.6e-188 663.3 530 63.0
AUR62024549 Chenopodium quinoa HOM05D003479 ORTHO05D004659 2.0e-188 662.9 532 64.1
CDE11G0667 Ceratophyllum demersum HOM05D003479 ORTHO05D004659 5.9e-188 661.4 533 64.7
Zm00001eb049240 Zea mays HOM05D003479 ORTHO05D004659 1.1e-186 657.1 531 63.5
ClCG06G004120 Citrullus lanatus HOM05D003479 ORTHO05D004659 1.3e-182 643.7 548 63.3
Mapoly0022s0091 Marchantia polymorpha HOM05D003479 ORTHO05D004659 6.2e-177 624.8 533 61.0
AagrBONN_evm.TU.Sc2ySwM_344.258 Anthoceros agrestis HOM05D003479 ORTHO05D004659 5.4e-165 585.1 536 58.4
Pp3c25_5940 Physcomitrium patens HOM05D003479 ORTHO05D004659 7.3e-162 574.7 532 56.8
Pp3c5_15420 Physcomitrium patens HOM05D003479 ORTHO05D004659 2.0e-159 566.6 532 56.8
SMO367G0831 Selaginella moellendorffii HOM05D003479 ORTHO05D004659 1.3e-158 563.9 528 56.8
Haze_05171 Corylus avellana HOM05D003479 ORTHO05D004659 9.2e-157 557.8 366 76.2
BcaC09g50076 Brassica carinata HOM05D003479 ORTHO05D004659 3.0e-131 473.0 530 51.5
C01p29360 Brassica napus HOM05D003479 ORTHO05D004659 8.1e-129 464.9 540 50.6
BolC1t02872H Brassica oleracea HOM05D003479 ORTHO05D004659 2.4e-128 463.4 540 50.6
A01p23620 Brassica napus HOM05D003479 ORTHO05D004659 1.2e-127 461.1 540 50.4
MD09G1292000 Malus domestica HOM05D003479 ORTHO05D004659 7.4e-122 441.8 510 51.6
HPP92_010564 Vanilla planifolia HOM05D003479 ORTHO05D004659 8.2e-113 411.8 533 46.2
BcaC07g42626 Brassica carinata HOM05D003479 ORTHO05D004659 5.3e-104 382.5 298 66.1
SEGI_06113 Sequoiadendron giganteum HOM05D003479 ORTHO05D004659 2.0e-55 221.1 175 63.4
Cre01.g054800 Chlamydomonas reinhardtii HOM05D003479 ORTHO05D004659 5.0e-54 216.5 529 33.1
CDE11G0371 Ceratophyllum demersum HOM05D003479 ORTHO05D004659 8.9e-51 205.7 446 33.2
BraA01t02268Z Brassica rapa HOM05D003479 ORTHO05D004659 3.2e-48 197.2 481 31.6
Gohir.A11G116300 Gossypium hirsutum HOM05D003479 ORTHO05D004659 8.9e-43 179.1 128 66.4
SEGI_16825 Sequoiadendron giganteum HOM05D003479 ORTHO05D004659 2.1e-39 167.9 291 36.4
HPP92_010563 Vanilla planifolia HOM05D003479 ORTHO05D004659 5.8e-34 149.8 260 38.1
TPR.G23936 Trifolium pratense HOM05D003479 ORTHO05D004659 1.3e-33 148.7 99 71.7
AUR62024550 Chenopodium quinoa HOM05D003479 ORTHO05D004659 1.1e-32 145.6 206 40.8
Rhsim01G0001500 Rhododendron simsii HOM05D003479 ORTHO05D004659 1.9e-32 144.8 206 39.8
Nitab4.5_0001628g0070 Nicotiana tabacum HOM05D003479 ORTHO05D004659 1.6e-31 141.7 206 39.3
Eucgr.K00541 Eucalyptus grandis HOM05D003479 ORTHO05D004659 4.3e-29 133.7 201 40.3
Sabra02G0131400 Salix brachista HOM05D003479 ORTHO05D004659 2.4e-24 117.9 175 38.9
MBI11_g09044_MAGBIO Magnolia biondii HOM05D003479 ORTHO05D004659 3.2e-24 117.5 94 57.4
HPP92_010570 Vanilla planifolia HOM05D003479 ORTHO05D004659 2.1e-23 114.8 240 32.5
MBI11_g43863_MAGBIO Magnolia biondii HOM05D003479 ORTHO05D004659 7.9e-23 112.8 76 67.1
MBI11_g39904_MAGBIO Magnolia biondii HOM05D003479 ORTHO05D004659 1.1e-21 109.0 73 67.1
MBI11_g41070_MAGBIO Magnolia biondii HOM05D003479 ORTHO05D004659 1.1e-21 109.0 73 67.1
MBI11_g41071_MAGBIO Magnolia biondii HOM05D003479 ORTHO05D004659 1.1e-21 109.0 76 64.5
MBI11_g09870_MAGBIO Magnolia biondii HOM05D003479 ORTHO05D004659 1.9e-21 108.2 76 64.5
BolC1t02863H Brassica oleracea HOM05D003479 ORTHO05D004659 2.1e-15 88.2 211 31.3
Lsat_1_v5_gn_2_36600 Lactuca sativa HOM05D003479 ORTHO05D004659 6.7e-14 83.2 108 42.6
SEGI_12620 Sequoiadendron giganteum HOM05D003479 ORTHO05D004659 1.9e-13 81.6 112 42.9
Lju2566A0G21 Lonicera japonica HOM05D003479 ORTHO05D004659 4.3e-13 80.5 135 37.0
BcaC09g50075 Brassica carinata HOM05D003479 ORTHO05D004659 1.6e-12 78.6 128 36.7
Lsat_1_v5_gn_6_105821 Lactuca sativa HOM05D003479 ORTHO05D016156 4.8e-12 77.0 117 38.5
Lsat_1_v5_gn_6_44740 Lactuca sativa HOM05D003479 ORTHO05D004659 4.8e-12 77.0 117 38.5
Lsat_1_v5_gn_9_52321 Lactuca sativa HOM05D003479 ORTHO05D004659 4.8e-12 77.0 117 38.5
CAN.G179.24 Capsicum annuum HOM05D003479 ORTHO05D004659 6.9e-11 73.2 90 42.2
CDE05G2601 Ceratophyllum demersum HOM05D003479 ORTHO05D004659 1.2e-10 72.4 43 79.1
BolC8t51271H Brassica oleracea HOM05D003479 ORTHO05D040158 1.3e-09 68.9 43 67.4
FAN14G2177 Fragaria x ananassa HOM05D003479 ORTHO05D015055 4.9e-09 67.0 44 70.5
BolC1t02865H Brassica oleracea HOM05D003479 ORTHO05D004659 6.5e-09 66.6 102 36.3
BolC1t02870H Brassica oleracea HOM05D003479 ORTHO05D004659 6.5e-09 66.6 102 36.3
BolC1t02871H Brassica oleracea HOM05D003479 ORTHO05D004659 6.5e-09 66.6 102 36.3
unitig_578.g16648 Utricularia gibba HOM05D003479 ORTHO05D004659 1.1e-08 65.9 105 40.0
C08p36950 Brassica napus HOM05D003479 ORTHO05D040158 7.1e-08 63.2 44 65.9
Lsat_1_v5_gn_2_13561 Lactuca sativa HOM05D003479 ORTHO05D004659 6.0e-07 60.1 56 48.2
unitig_578.g16649 Utricularia gibba HOM05D003479 ORTHO05D004659 1.3e-06 58.9 144 32.6
MD09G1291900 Malus domestica HOM05D003479 ORTHO05D004659 6.7e-06 56.6 35 74.3


User provided reference genes

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