Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_578.g16640 Utricularia gibba HOM05D007186 ORTHO05D008970 1.1e-95 353.2 172 100.0
FAN05G2361 Fragaria x ananassa HOM05D007186 ORTHO05D008970 2.7e-49 199.1 165 60.0
FvH4_6g41490 Fragaria vesca HOM05D007186 ORTHO05D008970 3.5e-49 198.7 165 59.4
PGSC0003DMG400030273 Solanum tuberosum HOM05D007186 ORTHO05D008970 7.9e-49 197.6 168 60.7
Rhsim06G0171800 Rhododendron simsii HOM05D007186 ORTHO05D008970 1.0e-48 197.2 151 60.3
Sopen05g025420 Solanum pennellii HOM05D007186 ORTHO05D008970 1.0e-48 197.2 168 57.7
Nitab4.5_0011275g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 1.8e-48 196.4 156 60.3
Peaxi162Scf00147g01818 Petunia axillaris HOM05D007186 ORTHO05D008970 2.3e-48 196.1 163 60.7
FAN09G3526 Fragaria x ananassa HOM05D007186 ORTHO05D008970 3.0e-48 195.7 165 60.0
Solyc05g041430.3 Solanum lycopersicum HOM05D007186 ORTHO05D008970 3.0e-48 195.7 168 57.1
RcHm_v2.0_Chr2g0157151 Rosa chinensis HOM05D007186 ORTHO05D008970 8.7e-48 194.1 165 59.4
Dinv07835 Davidia involucrata HOM05D007186 ORTHO05D008970 1.1e-47 193.7 170 57.1
CSS0038956 Camellia sinensis var. sinensis HOM05D007186 ORTHO05D008970 4.3e-47 191.8 150 58.0
Nitab4.5_0002877g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 5.6e-47 191.4 156 57.7
Potri.014G162700 Populus trichocarpa HOM05D007186 ORTHO05D008970 2.8e-46 189.1 173 56.6
Ciclev10016992m.g Citrus clementina HOM05D007186 ORTHO05D008970 6.2e-46 188.0 163 58.9
QL08p029418 Quercus lobata HOM05D007186 ORTHO05D008970 6.2e-46 188.0 162 54.9
Gorai.001G219300 Gossypium raimondii HOM05D007186 ORTHO05D008970 1.1e-45 187.2 170 54.7
Prupe.3G204800 Prunus persica HOM05D007186 ORTHO05D008970 2.4e-45 186.0 149 60.4
Gohir.D07G195800 Gossypium hirsutum HOM05D007186 ORTHO05D008970 3.1e-45 185.7 170 54.1
COL.COLO4_06941 Corchorus olitorius HOM05D007186 ORTHO05D008970 9.0e-45 184.1 170 54.7
Sabra14G0124100 Salix brachista HOM05D007186 ORTHO05D008970 9.0e-45 184.1 154 57.1
Atru.chr6.3329 Acer truncatum HOM05D007186 ORTHO05D008970 1.2e-44 183.7 166 54.8
MD09G1119400 Malus domestica HOM05D007186 ORTHO05D008970 1.5e-44 183.3 149 59.7
CiPaw.04G194300 Carya illinoinensis HOM05D007186 ORTHO05D008970 2.0e-44 183.0 149 59.1
CANSAT54G2500 Cannabis sativa HOM05D007186 ORTHO05D008970 5.8e-44 181.4 157 56.1
PSO675G5362 Papaver somniferum HOM05D007186 ORTHO05D008970 9.9e-44 180.6 159 54.1
THA.LOC104808856 Tarenaya hassleriana HOM05D007186 ORTHO05D008970 1.7e-43 179.9 171 55.0
TWI36G0211 Tripterygium wilfordii HOM05D007186 ORTHO05D008970 2.9e-43 179.1 167 53.9
Phvul.008G287400 Phaseolus vulgaris HOM05D007186 ORTHO05D008970 4.9e-43 178.3 149 57.7
TAR624G0839 Trochodendron aralioides HOM05D007186 ORTHO05D008970 2.4e-42 176.0 159 56.6
AUR62017547 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.7e-41 172.6 157 51.6
VMungo0647G1315 Vigna mungo HOM05D007186 ORTHO05D008970 3.5e-41 172.2 149 56.4
Carub.0003s2639 Capsella rubella HOM05D007186 ORTHO05D008970 6.0e-41 171.4 167 50.9
MELO3C019365.2 Cucumis melo HOM05D007186 ORTHO05D008970 6.0e-41 171.4 166 51.2
PGR142G1014 Punica granatum HOM05D007186 ORTHO05D008970 7.9e-41 171.0 166 50.0
AUR62015089 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.3e-40 170.2 157 51.0
AUR62044229 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.3e-40 170.2 157 51.0
AUR62044345 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.3e-40 170.2 157 51.0
CsaV3_6G009340 Cucumis sativus L. HOM05D007186 ORTHO05D008970 1.8e-40 169.9 166 51.2
Thhalv10002690m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 1.8e-40 169.9 167 49.1
Actinidia07891 Actinidia chinensis HOM05D007186 ORTHO05D008970 2.3e-40 169.5 131 59.5
Hma1.2p1_0133F.1_g061060 Hydrangea macrophylla HOM05D007186 ORTHO05D008970 2.3e-40 169.5 131 58.0
Medtr5g097970 Medicago truncatula HOM05D007186 ORTHO05D008970 2.3e-40 169.5 149 55.0
GSVIVG01030422001 Vitis vinifera HOM05D007186 ORTHO05D008970 3.9e-40 168.7 163 52.1
AL3G42380 Arabidopsis lyrata HOM05D007186 ORTHO05D008970 5.1e-40 168.3 164 51.2
Glyma.02G307400 Glycine max HOM05D007186 ORTHO05D008970 6.7e-40 167.9 151 55.6
BcaC01g03189 Brassica carinata HOM05D007186 ORTHO05D008970 8.7e-40 167.5 167 50.3
TPR.G15068 Trifolium pratense HOM05D007186 ORTHO05D008970 1.5e-39 166.8 149 53.7
Aqoxy1G02832 Aquilegia oxysepala HOM05D007186 ORTHO05D008970 4.3e-39 165.2 149 53.0
C03p55060 Brassica napus HOM05D007186 ORTHO05D008970 4.3e-39 165.2 167 49.7
BolC3t17781H Brassica oleracea HOM05D007186 ORTHO05D008970 4.3e-39 165.2 167 49.7
Duzib138G0377 Durio zibethinus HOM05D007186 ORTHO05D008970 4.3e-39 165.2 147 55.1
Eucgr.K00670 Eucalyptus grandis HOM05D007186 ORTHO05D008970 1.6e-38 163.3 169 49.7
Manes.13G063846 Manihot esculenta HOM05D007186 ORTHO05D008970 1.6e-38 163.3 130 57.7
Sp3g23400 Schrenkiella parvula HOM05D007186 ORTHO05D008970 2.1e-38 162.9 159 49.7
LjContig00081g0025535 Lotus japonicus HOM05D000229 ORTHO05D008970 3.7e-38 162.2 166 50.0
HPP92_022801 Vanilla planifolia HOM05D007186 ORTHO05D008970 8.2e-38 161.0 140 54.3
Migut.M00010 Erythranthe guttata HOM05D007186 ORTHO05D008970 1.1e-37 160.6 170 51.2
ECA240G1183 Erigeron canadensis HOM05D007186 ORTHO05D008970 1.4e-37 160.2 149 53.7
Lsat_1_v5_gn_9_105540 Lactuca sativa HOM05D007186 ORTHO05D008970 1.8e-37 159.8 148 52.0
CARHR102760 Cardamine hirsuta HOM05D007186 ORTHO05D008970 2.4e-37 159.5 164 49.4
Hund24136 Selenicereus undatus HOM05D007186 ORTHO05D008970 2.4e-37 159.5 163 46.6
HanXRQChr03g0075731 Helianthus annuus HOM05D007186 ORTHO05D008970 1.2e-36 157.1 149 52.3
Lalb_Chr04g0247191 Lupinus albus HOM05D007186 ORTHO05D008970 1.5e-36 156.8 150 52.0
BcaC01g03185 Brassica carinata HOM05D007186 ORTHO05D008970 2.0e-36 156.4 162 46.3
Psat2g003840 Pisum sativum HOM05D007186 ORTHO05D008970 2.0e-36 156.4 151 51.7
MBI19_g06151_MAGBIO Magnolia biondii HOM05D007186 ORTHO05D008970 2.6e-36 156.0 133 52.6
BolC3t17784H Brassica oleracea HOM05D007186 ORTHO05D008970 5.8e-36 154.8 152 48.7
arahy.Tifrunner.gnm1.ann1.HI5B62 Arachis hypogaea HOM05D007186 ORTHO05D008970 1.0e-35 154.1 167 50.9
BraA03t13576Z Brassica rapa HOM05D007186 ORTHO05D008970 1.0e-35 154.1 148 50.7
ATR0712G003 Amborella trichopoda HOM05D007186 ORTHO05D008970 1.3e-35 153.7 141 48.9
Haze_12721 Corylus avellana HOM05D007186 ORTHO05D008970 1.7e-35 153.3 237 38.0
A03p44430 Brassica napus HOM05D007186 ORTHO05D008970 2.2e-35 152.9 148 50.7
arahy.Tifrunner.gnm1.ann1.CRYT1U Arachis hypogaea HOM05D007186 ORTHO05D008970 3.8e-35 152.1 161 49.7
C03p55120 Brassica napus HOM05D007186 ORTHO05D008970 1.1e-34 150.6 148 48.6
ClCG02G009490 Citrullus lanatus HOM05D007186 ORTHO05D008970 4.2e-34 148.7 218 38.5
SalBow7G1582 Salvia bowleyana HOM05D000037 ORTHO05D000150 5.5e-34 148.3 150 54.0
BcaB08g34487 Brassica carinata HOM05D007186 ORTHO05D008970 1.3e-32 143.7 139 50.4
BcaC01g03187 Brassica carinata HOM05D007186 ORTHO05D008970 1.3e-32 143.7 127 53.5
Zm00001eb245650 Zea mays HOM05D007186 ORTHO05D008970 2.3e-32 142.9 130 50.8
Sed0024069 Sechium edule HOM05D007186 ORTHO05D008970 6.7e-32 141.4 145 48.3
Oeu040479.1 Olea europaea HOM05D007186 ORTHO05D008970 1.9e-31 139.8 119 60.5
Glyma.14G005600 Glycine max HOM05D007186 ORTHO05D008970 2.5e-31 139.4 133 52.6
AUR62044292 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.6e-30 136.7 155 45.2
Lj8A132T57 Lonicera japonica HOM05D007186 ORTHO05D008970 4.8e-30 135.2 149 48.3
Aa31sc53G20 Aethionema arabicum HOM05D007186 ORTHO05D006113 1.1e-29 134.0 148 45.9
SEGI_21441 Sequoiadendron giganteum HOM05D007186 ORTHO05D008970 3.8e-27 125.6 148 41.2
Os02g0588600 Oryza sativa ssp. japonica HOM05D007186 ORTHO05D008970 1.1e-26 124.0 154 41.6
DCAR_032166 Daucus carota HOM05D000693 ORTHO05D008970 1.1e-23 114.0 102 52.9
Pp3c15_5880 Physcomitrium patens HOM05D007186 ORTHO05D008970 1.5e-23 113.6 167 40.1
FAN14G0401 Fragaria x ananassa HOM05D007186 ORTHO05D008970 1.1e-21 107.5 99 56.6
FAN02G3692 Fragaria x ananassa HOM05D007186 ORTHO05D008970 2.2e-19 99.8 98 54.1
Nn1g07413 Nelumbo nucifera HOM05D007186 ORTHO05D008970 5.0e-19 98.6 76 56.6
arahy.Tifrunner.gnm1.ann1.I316DY Arachis hypogaea HOM05D007186 ORTHO05D008970 8.5e-19 97.8 101 49.5
Gohir.A07G189700 Gossypium hirsutum HOM05D007186 ORTHO05D008970 8.5e-19 97.8 96 53.1
Sc20g0003870 Simmondsia chinensis HOM05D007186 ORTHO05D008970 1.9e-18 96.7 78 51.3
MSTRG.6661 Avicennia marina HOM05D007186 ORTHO05D008970 2.5e-18 96.3 94 54.3
vmacro12130 Vaccinium macrocarpon HOM05D007186 ORTHO05D008970 4.2e-18 95.5 80 56.2
SMO364G0535 Selaginella moellendorffii HOM05D007186 ORTHO05D008970 7.2e-18 94.7 154 35.1
Thecc.01G185600 Theobroma cacao HOM05D007186 ORTHO05D008970 9.4e-18 94.4 98 51.0
Mapoly0123s0026 Marchantia polymorpha HOM05D007186 ORTHO05D008970 1.2e-17 94.0 145 36.6
EL10Ac9g22768 Beta vulgaris HOM05D007186 ORTHO05D008970 3.6e-17 92.4 84 54.8
arahy.Tifrunner.gnm1.ann1.ZIY68Y Arachis hypogaea HOM05D007186 ORTHO05D008970 1.8e-16 90.1 86 50.0
Eucgr.K00669 Eucalyptus grandis HOM05D007186 ORTHO05D008970 1.8e-16 90.1 73 56.2
AUR62025215 Chenopodium quinoa HOM05D007186 ORTHO05D008970 3.1e-13 79.3 66 56.1
Sopen05g025410 Solanum pennellii HOM05D007186 ORTHO05D008970 2.9e-11 72.8 60 58.3
arahy.Tifrunner.gnm1.ann1.5R4F72 Arachis hypogaea HOM05D007186 ORTHO05D008970 1.9e-10 70.1 132 37.9
MCO11G099 Micromonas commoda HOM05D007186 ORTHO05D008970 5.5e-10 68.6 109 35.8
Thhalv10002943m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 1.1e-07 60.8 72 43.1
AT2G04790 Arabidopsis thaliana HOM05D007186 ORTHO05D008970 2.0e-07 60.1 59 47.5


User provided reference genes

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