Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_578.g16592 Utricularia gibba HOM05D004021 ORTHO05D003767 0.0e+00 1924.8 966 100.0
unitig_85.g27153 Utricularia gibba HOM05D004021 ORTHO05D003767 2.8e-151 540.4 730 48.9
unitig_26.g9789 Utricularia gibba HOM05D004021 ORTHO05D003767 3.7e-103 380.6 1003 34.7
MSTRG.1655 Avicennia marina HOM05D004021 ORTHO05D003767 1.0e-100 372.5 994 32.4
MSTRG.14021 Avicennia marina HOM05D004021 ORTHO05D003767 1.6e-98 365.2 999 33.0
Migut.E01516 Erythranthe guttata HOM05D004021 ORTHO05D003767 9.7e-88 329.3 986 32.5
SalBow1G4226 Salvia bowleyana HOM05D004021 ORTHO05D003767 1.1e-83 315.8 1107 29.9
SGA_v2.0_scaffold163G38081 Striga asiatica HOM05D004021 ORTHO05D003767 2.1e-66 258.5 958 31.4
Migut.A00223 Erythranthe guttata HOM05D004021 ORTHO05D003767 5.0e-60 237.3 971 29.2
SGA_v2.0_scaffold169G38653 Striga asiatica HOM05D004021 ORTHO05D003767 1.4e-57 229.2 982 28.1
SalBow4G0344 Salvia bowleyana HOM05D004021 ORTHO05D003767 2.5e-51 208.4 951 28.2
unitig_85.g27152 Utricularia gibba HOM05D004021 ORTHO05D003767 4.1e-46 191.0 232 53.0
Oeu031555.1 Olea europaea HOM05D004021 ORTHO05D003767 9.9e-40 169.9 1079 24.7
Oeu012193.1 Olea europaea HOM05D004021 ORTHO05D003767 7.1e-38 163.7 811 26.6
Peaxi162Scf00276g00210 Petunia axillaris HOM05D004021 ORTHO05D003767 1.2e-24 119.8 1185 23.4
Nitab4.5_0000664g0250 Nicotiana tabacum HOM05D004021 ORTHO05D003767 1.2e-21 109.8 770 24.9
Nitab4.5_0001567g0120 Nicotiana tabacum HOM05D004021 ORTHO05D003767 1.1e-19 103.2 930 23.5
Oeu015740.1 Olea europaea HOM05D004021 ORTHO05D003767 8.1e-18 97.1 368 30.2
Nitab4.5_0001567g0150 Nicotiana tabacum HOM05D004021 ORTHO05D003767 4.0e-17 94.7 787 24.5
Nitab4.5_0000664g0210 Nicotiana tabacum HOM05D004021 ORTHO05D003767 2.6e-16 92.0 1034 22.4
Cpa.g.sc7.254 Carica papaya HOM05D004021 ORTHO05D003767 1.7e-15 89.4 99 45.5
CAN.G309.87 Capsicum annuum HOM05D004021 ORTHO05D003767 4.9e-15 87.8 133 41.4
PGSC0003DMG401018585 Solanum tuberosum HOM05D004021 ORTHO05D003767 1.4e-14 86.3 118 44.1
THA.LOC104799199 Tarenaya hassleriana HOM05D004021 ORTHO05D003767 4.6e-13 81.3 91 49.5
Dinv14242 Davidia involucrata HOM05D004021 ORTHO05D003767 1.0e-12 80.1 145 36.6
AT5G11530 Arabidopsis thaliana HOM05D004021 ORTHO05D003767 3.9e-12 78.2 115 40.9
Sopen11g028940 Solanum pennellii HOM05D004021 ORTHO05D003767 3.9e-12 78.2 118 39.8
Solyc11g071250.3 Solanum lycopersicum HOM05D004021 ORTHO05D003767 5.1e-12 77.8 118 39.8
THA.LOC104814779 Tarenaya hassleriana HOM05D004021 ORTHO05D003767 6.7e-12 77.4 89 44.9
Aa31LG3G15670 Aethionema arabicum HOM05D004021 ORTHO05D003767 1.1e-11 76.6 88 45.5
AL6G22200 Arabidopsis lyrata HOM05D004021 ORTHO05D003767 1.5e-11 76.3 108 38.9
CiPaw.07G205800 Carya illinoinensis HOM05D004021 ORTHO05D003767 1.9e-11 75.9 132 34.1
Nitab4.5_0000500g0270 Nicotiana tabacum HOM05D004021 ORTHO05D003767 3.3e-11 75.1 103 44.7
Carub.0006s1000 Capsella rubella HOM05D004021 ORTHO05D003767 4.3e-11 74.7 108 38.0
Lj8A589T33 Lonicera japonica HOM05D004021 ORTHO05D003767 4.3e-11 74.7 108 40.7
Nitab4.5_0002178g0010 Nicotiana tabacum HOM05D004021 ORTHO05D003767 4.3e-11 74.7 114 43.0
Haze_21872 Corylus avellana HOM05D004021 ORTHO05D003767 5.6e-11 74.3 111 41.4
GSVIVG01035651001 Vitis vinifera HOM05D004021 ORTHO05D003767 5.6e-11 74.3 92 40.2
A02p01040 Brassica napus HOM05D004021 ORTHO05D003767 7.4e-11 73.9 101 38.6
BraA02t05084Z Brassica rapa HOM05D004021 ORTHO05D003767 7.4e-11 73.9 101 38.6
Peaxi162Scf00657g00058 Petunia axillaris HOM05D004021 ORTHO05D003767 7.4e-11 73.9 124 40.3
BcaNung01931 Brassica carinata HOM05D004021 ORTHO05D003767 9.6e-11 73.6 101 38.6
Cfa013353 Carpinus fangiana HOM05D004021 ORTHO05D003767 9.6e-11 73.6 119 40.3
Ciclev10007267m.g Citrus clementina HOM05D004021 ORTHO05D003767 9.6e-11 73.6 115 41.7
BcaC03g13370 Brassica carinata HOM05D004021 ORTHO05D003767 1.3e-10 73.2 101 38.6
C02p05090 Brassica napus HOM05D004021 ORTHO05D003767 1.3e-10 73.2 101 38.6
C03p05810 Brassica napus HOM05D000602 ORTHO05D006896 1.3e-10 73.2 108 39.8
BolC2t06463H Brassica oleracea HOM05D004021 ORTHO05D003767 1.3e-10 73.2 101 38.6
BcaB01g05477 Brassica carinata HOM05D004021 ORTHO05D003767 2.1e-10 72.4 108 38.9
Lj8A589G31 Lonicera japonica HOM05D004021 ORTHO05D003767 2.1e-10 72.4 142 36.6
QL12p029472 Quercus lobata HOM05D004021 ORTHO05D003767 2.1e-10 72.4 146 33.6
BraA03t09842Z Brassica rapa HOM05D004021 ORTHO05D003767 2.8e-10 72.0 130 33.1
RcHm_v2.0_Chr6g0305941 Rosa chinensis HOM05D004021 ORTHO05D003767 2.8e-10 72.0 152 35.5
Sp6g32070 Schrenkiella parvula HOM05D004021 ORTHO05D003767 2.8e-10 72.0 101 38.6
Ah.10g035100 Amaranthus hybridus HOM05D012164 ORTHO05D003767 3.7e-10 71.6 76 43.4
BolC3t13094H Brassica oleracea HOM05D004021 ORTHO05D003767 3.7e-10 71.6 108 39.8
Thhalv10015703m.g Eutrema salsugineum HOM05D004021 ORTHO05D003767 3.7e-10 71.6 103 37.9
Rhsim07G0152700 Rhododendron simsii HOM05D004021 ORTHO05D003767 3.7e-10 71.6 109 38.5
Sabra06G0188100 Salix brachista HOM05D004021 ORTHO05D003767 3.7e-10 71.6 109 42.2
CARHR201690 Cardamine hirsuta HOM05D004021 ORTHO05D003767 4.8e-10 71.2 112 37.5
Actinidia14666 Actinidia chinensis HOM05D004021 ORTHO05D003767 8.1e-10 70.5 99 42.4
CiPaw.08G024400 Carya illinoinensis HOM05D004021 ORTHO05D003767 8.1e-10 70.5 116 37.9
FAN20G2231 Fragaria x ananassa HOM05D004021 ORTHO05D003767 8.1e-10 70.5 110 44.5
Manes.16G071666 Manihot esculenta HOM05D004021 ORTHO05D003767 8.1e-10 70.5 132 37.1
Lalb_Chr11g0064441 Lupinus albus HOM05D004021 ORTHO05D003767 1.1e-09 70.1 103 40.8
Potri.006G240500 Populus trichocarpa HOM05D004021 ORTHO05D003767 1.1e-09 70.1 109 41.3
Hund03406 Selenicereus undatus HOM05D012164 ORTHO05D003767 1.4e-09 69.7 96 38.5
FAN15G2992 Fragaria x ananassa HOM05D004021 ORTHO05D003767 1.8e-09 69.3 110 42.7
Prupe.1G450900 Prunus persica HOM05D004021 ORTHO05D003767 1.8e-09 69.3 145 33.8
A03p05080 Brassica napus HOM05D000602 ORTHO05D006896 2.4e-09 68.9 107 37.4
CANSAT25G3821 Cannabis sativa HOM05D004021 ORTHO05D003767 2.4e-09 68.9 134 36.6
Potri.018G039500 Populus trichocarpa HOM05D004021 ORTHO05D003767 2.4e-09 68.9 109 40.4
AUR62041723 Chenopodium quinoa HOM05D012164 ORTHO05D003767 4.0e-09 68.2 70 44.3
Sabra18G0039500 Salix brachista HOM05D004021 ORTHO05D003767 4.0e-09 68.2 109 40.4
Duzib150G1483 Durio zibethinus HOM05D004021 ORTHO05D003767 5.3e-09 67.8 133 34.6
MD08G1116300 Malus domestica HOM05D004021 ORTHO05D003767 5.3e-09 67.8 121 40.5
DCAR_003118 Daucus carota HOM05D004021 ORTHO05D003767 6.9e-09 67.4 152 32.2
Thecc.09G042000 Theobroma cacao HOM05D004021 ORTHO05D003767 6.9e-09 67.4 133 34.6
A06p36400 Brassica napus HOM05D004021 ORTHO05D003767 9.0e-09 67.0 96 36.5
BraA06t26563Z Brassica rapa HOM05D004021 ORTHO05D003767 9.0e-09 67.0 96 36.5
FvH4_2g35880 Fragaria vesca HOM05D004021 ORTHO05D003767 9.0e-09 67.0 110 41.8
FAN27G1714 Fragaria x ananassa HOM05D004021 ORTHO05D003767 9.0e-09 67.0 110 41.8
Gohir.D07G026700 Gossypium hirsutum HOM05D004021 ORTHO05D003767 9.0e-09 67.0 147 34.0
COL.COLO4_18677 Corchorus olitorius HOM05D004021 ORTHO05D003767 1.2e-08 66.6 126 35.7
EL10Ac2g04051 Beta vulgaris HOM05D012164 ORTHO05D003767 1.5e-08 66.2 54 53.7
C07p42110 Brassica napus HOM05D004021 ORTHO05D003767 1.5e-08 66.2 96 35.4
Duzib187G0651 Durio zibethinus HOM05D004021 ORTHO05D003767 1.5e-08 66.2 106 34.9
Gorai.001G027700 Gossypium raimondii HOM05D004021 ORTHO05D003767 1.5e-08 66.2 146 33.6
Aa31LG11G4580 Aethionema arabicum HOM05D004021 ORTHO05D003767 2.0e-08 65.9 63 49.2
BcaNung03924 Brassica carinata HOM05D004021 ORTHO05D003767 2.0e-08 65.9 96 35.4
BolC7t44742H Brassica oleracea HOM05D004021 ORTHO05D003767 2.0e-08 65.9 96 35.4
Gorai.001G027600 Gossypium raimondii HOM05D004021 ORTHO05D003767 2.0e-08 65.9 133 33.1
Gohir.A07G023100 Gossypium hirsutum HOM05D004021 ORTHO05D003767 2.6e-08 65.5 147 34.0
MD15G1096000 Malus domestica HOM05D004021 ORTHO05D003767 3.4e-08 65.1 153 34.0
CSS0009602 Camellia sinensis var. sinensis HOM05D004021 ORTHO05D003767 4.5e-08 64.7 109 42.2
PGR044G0442 Punica granatum HOM05D004021 ORTHO05D003767 4.5e-08 64.7 134 35.8
Dinv30267 Davidia involucrata HOM05D004021 ORTHO05D003767 5.8e-08 64.3 103 37.9
Thhalv10003568m.g Eutrema salsugineum HOM05D004021 ORTHO05D003767 5.8e-08 64.3 91 41.8
Gohir.A07G023000 Gossypium hirsutum HOM05D004021 ORTHO05D003767 5.8e-08 64.3 147 32.0
Sed0007846 Sechium edule HOM05D004021 ORTHO05D003767 5.8e-08 64.3 99 33.3
Hund19530 Selenicereus undatus HOM05D012164 ORTHO05D003767 5.8e-08 64.3 85 40.0
Lj1g0012897 Lotus japonicus HOM05D004021 ORTHO05D003767 9.9e-08 63.5 121 37.2
Nn2g11674 Nelumbo nucifera HOM05D004021 ORTHO05D003767 9.9e-08 63.5 62 41.9
Ca_15608_v3 Cicer arietinum L. HOM05D004021 ORTHO05D003767 1.3e-07 63.2 83 41.0
MELO3C003457.2 Cucumis melo HOM05D004021 ORTHO05D003767 1.7e-07 62.8 102 35.3
CsaV3_3G048630 Cucumis sativus L. HOM05D004021 ORTHO05D003767 1.7e-07 62.8 102 35.3
AUR62009309 Chenopodium quinoa HOM05D012164 ORTHO05D003767 2.2e-07 62.4 115 32.2
DCAR_007709 Daucus carota HOM05D004021 ORTHO05D003767 2.2e-07 62.4 107 31.8
MBI01_g30860_MAGBIO Magnolia biondii HOM05D004021 ORTHO05D003767 3.8e-07 61.6 122 35.2
Lj4g0004076 Lotus japonicus HOM05D032889 ORTHO05D003767 4.9e-07 61.2 77 40.3
CSS0003638 Camellia sinensis var. sinensis HOM05D004021 ORTHO05D003767 6.4e-07 60.8 67 40.3
Eucgr.C02901 Eucalyptus grandis HOM05D004021 ORTHO05D003767 6.4e-07 60.8 95 37.9
Actinidia15734 Actinidia chinensis HOM05D004021 ORTHO05D003767 8.4e-07 60.5 1132 20.5
arahy.Tifrunner.gnm1.ann1.E545QA Arachis hypogaea HOM05D004021 ORTHO05D003767 8.4e-07 60.5 83 33.7
Lalb_Chr24g0396931 Lupinus albus HOM05D004021 ORTHO05D003767 8.4e-07 60.5 85 35.3
Glyma.17G195000 Glycine max HOM05D004021 ORTHO05D003767 1.1e-06 60.1 55 50.9
Lalb_Chr14g0372341 Lupinus albus HOM05D004021 ORTHO05D003767 1.1e-06 60.1 84 32.1
arahy.Tifrunner.gnm1.ann1.QM1LQ0 Arachis hypogaea HOM05D004021 ORTHO05D003767 1.4e-06 59.7 102 35.3
CDE05G1483 Ceratophyllum demersum HOM05D050580 ORTHO05D003767 1.4e-06 59.7 81 34.6
TPR.G1392 Trifolium pratense HOM05D004021 ORTHO05D003767 1.9e-06 59.3 96 40.6
Nn3g18104 Nelumbo nucifera HOM05D004021 ORTHO05D003767 2.5e-06 58.9 99 35.4
CDE05G1167 Ceratophyllum demersum HOM05D004021 ORTHO05D003767 3.2e-06 58.5 73 39.7
ATR0315G010 Amborella trichopoda HOM05D004021 ORTHO05D003767 7.1e-06 57.4 88 33.0
Ah.16g105370 Amaranthus hybridus HOM05D012164 ORTHO05D003767 9.3e-06 57.0 58 41.4
Lalb_Chr22g0352261 Lupinus albus HOM05D004021 ORTHO05D003767 9.3e-06 57.0 87 33.3


User provided reference genes

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