Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_578.g16589 Utricularia gibba HOM05D007628 ORTHO05D007342 9.2e-43 176.4 84 100.0
unitig_8.g5068 Utricularia gibba HOM05D007628 ORTHO05D007342 4.7e-23 110.9 82 64.6
unitig_578.g16588 Utricularia gibba HOM05D007628 ORTHO05D007342 2.1e-15 85.5 72 55.6
unitig_8.g5066 Utricularia gibba HOM05D007628 ORTHO05D007342 5.2e-14 80.9 87 51.7
Os03g0734300 Oryza sativa ssp. japonica HOM05D007628 ORTHO05D007342 6.4e-12 73.9 79 44.3
AUR62004619 Chenopodium quinoa HOM05D007628 ORTHO05D007342 1.9e-11 72.4 46 65.2
EL10Ac1g00115 Beta vulgaris HOM05D007628 ORTHO05D007342 3.2e-11 71.6 74 47.3
AUR62022642 Chenopodium quinoa HOM05D007628 ORTHO05D007342 7.1e-11 70.5 46 63.0
RcHm_v2.0_Chr7g0228201 Rosa chinensis HOM05D007628 ORTHO05D007342 7.1e-11 70.5 75 45.3
RcHm_v2.0_Chr7g0228231 Rosa chinensis HOM05D007628 ORTHO05D007342 2.7e-10 68.6 75 45.3
FvH4_5g32180 Fragaria vesca HOM05D007628 ORTHO05D007342 4.6e-10 67.8 74 44.6
FAN08G0137 Fragaria x ananassa HOM05D007628 ORTHO05D007342 7.8e-10 67.0 47 57.4
FAN08G3446 Fragaria x ananassa HOM05D007628 ORTHO05D007342 7.8e-10 67.0 47 57.4
RcHm_v2.0_Chr7g0228331 Rosa chinensis HOM05D007628 ORTHO05D007342 7.8e-10 67.0 51 58.8
FAN08G2431 Fragaria x ananassa HOM05D007628 ORTHO05D007342 1.3e-09 66.2 74 44.6
Psat7g226000 Pisum sativum HOM05D007628 ORTHO05D007342 3.0e-09 65.1 49 57.1
CAN.G508.19 Capsicum annuum HOM05D008200 ORTHO05D007342 5.1e-09 64.3 81 40.7
FvH4_6g07490 Fragaria vesca HOM05D007628 ORTHO05D007342 5.1e-09 64.3 75 44.0
FAN14G5279 Fragaria x ananassa HOM05D007628 ORTHO05D007342 6.6e-09 63.9 76 43.4
Prupe.1G552700 Prunus persica HOM05D007628 ORTHO05D007342 8.7e-09 63.5 72 41.7
Migut.C01297 Erythranthe guttata HOM05D007628 ORTHO05D007342 1.1e-08 63.2 85 41.2
FvH4_5g32170 Fragaria vesca HOM05D007628 ORTHO05D007342 1.1e-08 63.2 83 39.8
RcHm_v2.0_Chr7g0228221 Rosa chinensis HOM05D007628 ORTHO05D007342 1.5e-08 62.8 77 37.7
FAN08G3537 Fragaria x ananassa HOM05D007628 ORTHO05D007342 2.5e-08 62.0 75 37.3
FvH4_5g32140 Fragaria vesca HOM05D007628 ORTHO05D007342 3.3e-08 61.6 75 37.3
FAN18G2608 Fragaria x ananassa HOM05D007628 ORTHO05D007342 3.3e-08 61.6 75 37.3
Medtr4g032865 Medicago truncatula HOM05D007628 ORTHO05D007342 5.6e-08 60.8 50 50.0
Peaxi162Scf00071g00425 Petunia axillaris HOM05D008200 ORTHO05D007342 5.6e-08 60.8 78 37.2
CAN.G308.48 Capsicum annuum HOM05D007628 ORTHO05D007342 9.6e-08 60.1 53 47.2
Psat7g225960 Pisum sativum HOM05D007628 ORTHO05D007342 9.6e-08 60.1 49 53.1
Prupe.1G552600 Prunus persica HOM05D007628 ORTHO05D007342 9.6e-08 60.1 53 45.3
Hund27101 Selenicereus undatus HOM05D007628 ORTHO05D007342 9.6e-08 60.1 49 51.0
Medtr4g032815 Medicago truncatula HOM05D007628 ORTHO05D007342 1.2e-07 59.7 71 43.7
Peaxi162Scf00071g00435 Petunia axillaris HOM05D008200 ORTHO05D010849 2.1e-07 58.9 75 37.3
Psat7g225880 Pisum sativum HOM05D007628 ORTHO05D007342 2.1e-07 58.9 47 53.2
Sopen07g028650 Solanum pennellii HOM05D008200 ORTHO05D010849 6.2e-07 57.4 77 39.0
PGSC0003DMG400018328 Solanum tuberosum HOM05D008200 ORTHO05D007342 8.1e-07 57.0 77 40.3
Lalb_Chr20g0108111 Lupinus albus HOM05D007628 ORTHO05D007342 1.1e-06 56.6 56 46.4
PGSC0003DMG400002110 Solanum tuberosum HOM05D008200 ORTHO05D007342 1.1e-06 56.6 79 36.7
Solyc07g054720.2 Solanum lycopersicum HOM05D008200 ORTHO05D007342 1.4e-06 56.2 77 39.0
TPR.G34119 Trifolium pratense HOM05D007628 ORTHO05D007342 1.4e-06 56.2 49 46.9
Nitab4.5_0005382g0020 Nicotiana tabacum HOM05D008200 ORTHO05D007342 1.8e-06 55.8 77 37.7
Psat7g225920 Pisum sativum HOM05D007628 ORTHO05D007342 1.8e-06 55.8 53 45.3
Peaxi162Scf00071g00049 Petunia axillaris HOM05D008200 ORTHO05D007342 2.4e-06 55.5 82 37.8
Sc01g0001910 Simmondsia chinensis HOM05D007628 ORTHO05D007342 2.4e-06 55.5 52 44.2
Haze_21289 Corylus avellana HOM05D017027 ORTHO05D007342 3.1e-06 55.1 54 46.3
TPR.G34100 Trifolium pratense HOM05D007628 ORTHO05D007342 3.1e-06 55.1 56 42.9
arahy.Tifrunner.gnm1.ann1.UI0JR9 Arachis hypogaea HOM05D007628 ORTHO05D007342 4.0e-06 54.7 83 41.0
Lalb_Chr25g0283251 Lupinus albus HOM05D007628 ORTHO05D007342 6.9e-06 53.9 49 49.0
Ah.09g230940 Amaranthus hybridus HOM05D007628 ORTHO05D007342 9.0e-06 53.5 48 41.7
Peaxi162Scf00391g00074 Petunia axillaris HOM05D008200 ORTHO05D007342 9.0e-06 53.5 50 46.0
RcHm_v2.0_Chr7g0228301 Rosa chinensis HOM05D007628 ORTHO05D007342 9.0e-06 53.5 72 33.3


User provided reference genes

Program Settings