Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_578.g16543 Utricularia gibba HOM05D001326 ORTHO05D004163 2.9e-76 288.5 149 100.0
unitig_8.g5036 Utricularia gibba HOM05D001326 ORTHO05D004163 4.1e-46 188.3 148 68.2
MSTRG.25063 Avicennia marina HOM05D001326 ORTHO05D004163 4.6e-21 105.1 123 51.2
Prupe.1G429000 Prunus persica HOM05D001326 ORTHO05D004163 3.0e-20 102.4 121 54.5
Lj1g0010090 Lotus japonicus HOM05D001326 ORTHO05D004163 3.9e-20 102.1 140 48.6
CAN.G1621.9 Capsicum annuum HOM05D001326 ORTHO05D004163 8.7e-20 100.9 129 51.9
SalBow6G1031 Salvia bowleyana HOM05D001326 ORTHO05D004163 1.9e-19 99.8 123 50.4
unitig_26.g9808 Utricularia gibba HOM05D001326 ORTHO05D004163 4.3e-19 98.6 138 49.3
Potri.002G122000 Populus trichocarpa HOM05D001326 ORTHO05D004163 5.6e-19 98.2 132 45.5
Migut.N02754 Erythranthe guttata HOM05D001326 ORTHO05D004163 7.3e-19 97.8 120 50.0
Oeu016580.1 Olea europaea HOM05D001326 ORTHO05D004163 9.6e-19 97.4 96 56.2
Migut.O00599 Erythranthe guttata HOM05D001326 ORTHO05D004163 1.3e-18 97.1 120 49.2
MD15G1075600 Malus domestica HOM05D001326 ORTHO05D004163 2.1e-18 96.3 119 51.3
Actinidia38087 Actinidia chinensis HOM05D001326 ORTHO05D004163 3.6e-18 95.5 102 54.9
CSS0008374 Camellia sinensis var. sinensis HOM05D001326 ORTHO05D004163 3.6e-18 95.5 89 57.3
Cc10_g05200 Coffea canephora HOM05D001326 ORTHO05D004163 3.6e-18 95.5 100 54.0
Manes.18G042600 Manihot esculenta HOM05D001326 ORTHO05D004163 6.2e-18 94.7 108 51.9
Nitab4.5_0003035g0010 Nicotiana tabacum HOM05D001326 ORTHO05D004163 8.1e-18 94.4 92 58.7
HanXRQChr05g0150481 Helianthus annuus HOM05D001326 ORTHO05D004163 1.1e-17 94.0 124 46.0
Lalb_Chr14g0368421 Lupinus albus HOM05D001326 ORTHO05D004163 1.1e-17 94.0 113 49.6
Nitab4.5_0011741g0010 Nicotiana tabacum HOM05D001326 ORTHO05D004163 1.1e-17 94.0 92 58.7
Sabra14G0014500 Salix brachista HOM05D001326 ORTHO05D004163 1.1e-17 94.0 122 46.7
Lalb_Chr22g0354841 Lupinus albus HOM05D001326 ORTHO05D004163 1.8e-17 93.2 93 55.9
Peaxi162Scf00219g00123 Petunia axillaris HOM05D001326 ORTHO05D004163 1.8e-17 93.2 108 53.7
MSTRG.22238 Avicennia marina HOM05D001326 ORTHO05D004163 2.4e-17 92.8 95 55.8
Potri.014G021900 Populus trichocarpa HOM05D001326 ORTHO05D004163 2.4e-17 92.8 124 46.0
Sed0004426 Sechium edule HOM05D001326 ORTHO05D004163 2.4e-17 92.8 133 45.1
SGA_v2.0_scaffold14G06954 Striga asiatica HOM05D001326 ORTHO05D004163 2.4e-17 92.8 146 43.8
SGA_v2.0_scaffold28G11812 Striga asiatica HOM05D001326 ORTHO05D004163 3.1e-17 92.4 137 44.5
Glyma.06G043700 Glycine max HOM05D001326 ORTHO05D004163 4.0e-17 92.0 141 44.0
Sabra02G0095900 Salix brachista HOM05D001326 ORTHO05D004163 4.0e-17 92.0 106 50.0
Solyc04g078380.3 Solanum lycopersicum HOM05D001326 ORTHO05D004163 4.0e-17 92.0 119 51.3
Actinidia08267 Actinidia chinensis HOM05D001326 ORTHO05D004163 5.3e-17 91.7 117 51.3
CiPaw.16G035200 Carya illinoinensis HOM05D001326 ORTHO05D004163 5.3e-17 91.7 100 50.0
AUR62044632 Chenopodium quinoa HOM05D001326 ORTHO05D004163 5.3e-17 91.7 125 44.8
MD08G1091600 Malus domestica HOM05D001326 ORTHO05D004163 5.3e-17 91.7 116 50.9
Phvul.009G068700 Phaseolus vulgaris HOM05D001326 ORTHO05D004163 5.3e-17 91.7 143 42.7
PGSC0003DMG400003309 Solanum tuberosum HOM05D001326 ORTHO05D004163 5.3e-17 91.7 119 51.3
Aqoxy5G01135 Aquilegia oxysepala HOM05D001326 ORTHO05D004163 6.9e-17 91.3 115 48.7
Lalb_Chr23g0267351 Lupinus albus HOM05D001326 ORTHO05D004163 6.9e-17 91.3 117 46.2
Nitab4.5_0004888g0020 Nicotiana tabacum HOM05D001326 ORTHO05D004163 6.9e-17 91.3 107 50.5
Sopen04g031970 Solanum pennellii HOM05D001326 ORTHO05D004163 6.9e-17 91.3 119 51.3
Glyma.04G043200 Glycine max HOM05D001326 ORTHO05D004163 1.2e-16 90.5 137 43.8
Psat6g014240 Pisum sativum HOM05D001326 ORTHO05D004163 1.2e-16 90.5 128 44.5
Ca_13253_v3 Cicer arietinum L. HOM05D001326 ORTHO05D004163 1.5e-16 90.1 138 44.2
Thhalv10011812m.g Eutrema salsugineum HOM05D001326 ORTHO05D004163 1.5e-16 90.1 133 43.6
Nitab4.5_0000569g0170 Nicotiana tabacum HOM05D001326 ORTHO05D004163 1.5e-16 90.1 94 54.3
Oeu036969.1 Olea europaea HOM05D001326 ORTHO05D004163 1.5e-16 90.1 89 56.2
Sc15g0005510 Simmondsia chinensis HOM05D001326 ORTHO05D004163 1.5e-16 90.1 129 46.5
Sc15g0005810 Simmondsia chinensis HOM05D001326 ORTHO05D004163 1.5e-16 90.1 129 46.5
Dinv39258 Davidia involucrata HOM05D001326 ORTHO05D004163 2.0e-16 89.7 101 55.4
CAN.G107.48 Capsicum annuum HOM05D001326 ORTHO05D004163 2.6e-16 89.4 117 45.3
AUR62044370 Chenopodium quinoa HOM05D001326 ORTHO05D004163 2.6e-16 89.4 111 48.6
DCAR_008838 Daucus carota HOM05D001326 ORTHO05D004163 2.6e-16 89.4 118 44.9
Dinv35915 Davidia involucrata HOM05D000232 ORTHO05D004163 2.6e-16 89.4 121 47.9
Medtr3g102500 Medicago truncatula HOM05D001326 ORTHO05D004163 2.6e-16 89.4 120 48.3
Rhsim06G0057100 Rhododendron simsii HOM05D001326 ORTHO05D004163 2.6e-16 89.4 147 42.9
TAR625G0613 Trochodendron aralioides HOM05D001326 ORTHO05D004163 2.6e-16 89.4 134 45.5
Atru.chr13.770 Acer truncatum HOM05D001326 ORTHO05D004163 4.5e-16 88.6 134 42.5
AL1G53320 Arabidopsis lyrata HOM05D001326 ORTHO05D004163 4.5e-16 88.6 97 52.6
Gohir.A01G121500 Gossypium hirsutum HOM05D001326 ORTHO05D004163 4.5e-16 88.6 118 44.9
Lsat_1_v5_gn_6_109441 Lactuca sativa HOM05D001326 ORTHO05D004163 4.5e-16 88.6 106 51.9
CiPaw.15G049900 Carya illinoinensis HOM05D001326 ORTHO05D004163 5.8e-16 88.2 120 47.5
Gohir.D05G210000 Gossypium hirsutum HOM05D001326 ORTHO05D004163 5.8e-16 88.2 111 45.9
Gorai.009G216400 Gossypium raimondii HOM05D001326 ORTHO05D004163 5.8e-16 88.2 111 45.9
Phvul.001G025400 Phaseolus vulgaris HOM05D001326 ORTHO05D004163 5.8e-16 88.2 118 47.5
FAN24G1427 Fragaria x ananassa HOM05D001326 ORTHO05D004163 7.6e-16 87.8 130 43.8
Actinidia22665 Actinidia chinensis HOM05D001326 ORTHO05D004163 9.9e-16 87.4 101 51.5
A10p06640 Brassica napus HOM05D001326 ORTHO05D004163 9.9e-16 87.4 102 50.0
BraA10t42922Z Brassica rapa HOM05D001326 ORTHO05D004163 9.9e-16 87.4 102 50.0
Haze_18087 Corylus avellana HOM05D001326 ORTHO05D004163 9.9e-16 87.4 92 52.2
Hma1.2p1_0634F.1_g192950 Hydrangea macrophylla HOM05D001326 ORTHO05D004163 9.9e-16 87.4 96 53.1
Sp1g34320 Schrenkiella parvula HOM05D001326 ORTHO05D004163 9.9e-16 87.4 117 46.2
AT1G47200 Arabidopsis thaliana HOM05D001326 ORTHO05D004163 1.3e-15 87.0 124 46.8
CANSAT25G2642 Cannabis sativa HOM05D001326 ORTHO05D004163 1.3e-15 87.0 98 50.0
VMungo0647G1866 Vigna mungo HOM05D001326 ORTHO05D004163 1.3e-15 87.0 92 52.2
EL10As7g23801 Beta vulgaris HOM05D001326 ORTHO05D004163 1.7e-15 86.7 151 41.7
Ca_15925_v3 Cicer arietinum L. HOM05D001326 ORTHO05D004163 1.7e-15 86.7 123 44.7
Thecc.08G095300 Theobroma cacao HOM05D001326 ORTHO05D004163 1.7e-15 86.7 131 44.3
BcaC08g42930 Brassica carinata HOM05D001326 ORTHO05D004163 2.2e-15 86.3 119 47.1
C06p01670 Brassica napus HOM05D001326 ORTHO05D004163 2.2e-15 86.3 119 47.1
BolC6t35298H Brassica oleracea HOM05D001326 ORTHO05D004163 2.2e-15 86.3 119 47.1
Carub.0001s3596 Capsella rubella HOM05D001326 ORTHO05D004163 2.9e-15 85.9 125 46.4
Glyma.17G237500 Glycine max HOM05D001326 ORTHO05D004163 2.9e-15 85.9 106 49.1
Gohir.A05G206500 Gossypium hirsutum HOM05D001326 ORTHO05D004163 2.9e-15 85.9 128 43.0
QL02p003371 Quercus lobata HOM05D001326 ORTHO05D004163 2.9e-15 85.9 125 42.4
Cfa018037 Carpinus fangiana HOM05D001326 ORTHO05D004163 3.8e-15 85.5 92 51.1
FAN15G1104 Fragaria x ananassa HOM05D001326 ORTHO05D004163 3.8e-15 85.5 128 43.8
Glyma.14G086900 Glycine max HOM05D001326 ORTHO05D004163 3.8e-15 85.5 103 49.5
Gohir.D01G109000 Gossypium hirsutum HOM05D001326 ORTHO05D004163 3.8e-15 85.5 104 48.1
CARHR036740 Cardamine hirsuta HOM05D001326 ORTHO05D004163 4.9e-15 85.1 89 53.9
THA.LOC104814178 Tarenaya hassleriana HOM05D001326 ORTHO05D004163 4.9e-15 85.1 104 49.0
vmacro23170 Vaccinium macrocarpon HOM05D001326 ORTHO05D004163 4.9e-15 85.1 113 49.6
BcaB07g33854 Brassica carinata HOM05D001326 ORTHO05D004163 6.4e-15 84.7 110 46.4
COL.COLO4_28576 Corchorus olitorius HOM05D001326 ORTHO05D004163 6.4e-15 84.7 118 44.9
CsaV3_2G026380 Cucumis sativus L. HOM05D001326 ORTHO05D004163 6.4e-15 84.7 107 49.5
RcHm_v2.0_Chr6g0308881 Rosa chinensis HOM05D001326 ORTHO05D004163 6.4e-15 84.7 114 44.7
MELO3C016792.2 Cucumis melo HOM05D001326 ORTHO05D004163 8.4e-15 84.3 120 45.0
CsaV3_4G034780 Cucumis sativus L. HOM05D001326 ORTHO05D004163 8.4e-15 84.3 120 45.0
Ah.05g167240 Amaranthus hybridus HOM05D001326 ORTHO05D004163 1.1e-14 84.0 102 49.0
MELO3C010830.2 Cucumis melo HOM05D001326 ORTHO05D004163 1.1e-14 84.0 107 50.5
Duzib093G0342 Durio zibethinus HOM05D001326 ORTHO05D004163 1.1e-14 84.0 122 43.4
Medtr1g018710 Medicago truncatula HOM05D001326 ORTHO05D004163 1.1e-14 84.0 103 44.7
Sed0026094 Sechium edule HOM05D001326 ORTHO05D004163 1.1e-14 84.0 98 51.0
TWI36G1533 Tripterygium wilfordii HOM05D001326 ORTHO05D004163 1.1e-14 84.0 106 50.9
Gorai.002G133200 Gossypium raimondii HOM05D001326 ORTHO05D004163 1.4e-14 83.6 118 43.2
VMungo1309G2681 Vigna mungo HOM05D001326 ORTHO05D004163 1.4e-14 83.6 121 43.0
FAN20G2280 Fragaria x ananassa HOM05D001326 ORTHO05D004163 1.9e-14 83.2 115 42.6
Psat0s3164g0120 Pisum sativum HOM05D001326 ORTHO05D004163 1.9e-14 83.2 140 41.4
Aa31LG5G18920 Aethionema arabicum HOM05D001326 ORTHO05D004163 2.4e-14 82.8 121 43.8
THA.LOC104820501 Tarenaya hassleriana HOM05D001326 ORTHO05D004163 2.4e-14 82.8 101 46.5
A08p05940 Brassica napus HOM05D001326 ORTHO05D004163 3.2e-14 82.4 117 46.2
BraA08t32595Z Brassica rapa HOM05D001326 ORTHO05D004163 3.2e-14 82.4 117 46.2
CARHR180920 Cardamine hirsuta HOM05D001326 ORTHO05D004163 3.2e-14 82.4 125 44.8
ClCG05G020300 Citrullus lanatus HOM05D001326 ORTHO05D004163 3.2e-14 82.4 110 47.3
ClCG08G016240 Citrullus lanatus HOM05D001326 ORTHO05D004163 3.2e-14 82.4 101 50.5
TPR.G25586 Trifolium pratense HOM05D001326 ORTHO05D004163 3.2e-14 82.4 121 45.5
Ciclev10002480m.g Citrus clementina HOM05D001326 ORTHO05D004163 4.2e-14 82.0 128 43.0
BcaC07g37236 Brassica carinata HOM05D001326 ORTHO05D004163 5.4e-14 81.6 117 46.2
C08p06600 Brassica napus HOM05D001326 ORTHO05D004163 5.4e-14 81.6 117 46.2
BolC8t47503H Brassica oleracea HOM05D001326 ORTHO05D004163 5.4e-14 81.6 117 46.2
FvH4_2g33670 Fragaria vesca HOM05D001326 ORTHO05D004163 5.4e-14 81.6 129 40.3
ECA246G0756 Erigeron canadensis HOM05D001326 ORTHO05D004163 7.1e-14 81.3 109 49.5
BcaB04g17546 Brassica carinata HOM05D001326 ORTHO05D004163 9.3e-14 80.9 103 46.6
Cpa.g.sc21.138 Carica papaya HOM05D001326 ORTHO05D004163 9.3e-14 80.9 97 53.6
FAN27G3472 Fragaria x ananassa HOM05D001326 ORTHO05D004163 9.3e-14 80.9 115 44.3
TAR381G1295 Trochodendron aralioides HOM05D001326 ORTHO05D004163 9.3e-14 80.9 123 43.1
Nn1g04667 Nelumbo nucifera HOM05D001326 ORTHO05D004163 1.2e-13 80.5 105 45.7
AL47U10010 Arabidopsis lyrata HOM05D001326 ORTHO05D004163 1.6e-13 80.1 89 50.6
AT5G43070 Arabidopsis thaliana HOM05D001326 ORTHO05D004163 2.7e-13 79.3 89 50.6
Sed0018271 Sechium edule HOM05D001326 ORTHO05D004163 2.7e-13 79.3 113 46.0
AL8G17650 Arabidopsis lyrata HOM05D001326 ORTHO05D004163 3.5e-13 79.0 89 49.4
PGR031G2476 Punica granatum HOM05D001326 ORTHO05D004163 4.6e-13 78.6 119 45.4
Lsat_1_v5_gn_1_23021 Lactuca sativa HOM05D001326 ORTHO05D004163 7.9e-13 77.8 99 45.5
PSO541G2388 Papaver somniferum HOM05D001326 ORTHO05D004163 7.9e-13 77.8 134 40.3
PSO675G1014 Papaver somniferum HOM05D001326 ORTHO05D004163 7.9e-13 77.8 134 40.3
Zm00001eb400520 Zea mays HOM05D001326 ORTHO05D004163 1.3e-12 77.0 124 45.2
Gorai.009G276700 Gossypium raimondii HOM05D001326 ORTHO05D004163 1.8e-12 76.6 128 40.6
Duzib041G0056 Durio zibethinus HOM05D001326 ORTHO05D004163 2.3e-12 76.3 99 44.4
TWI09G1274 Tripterygium wilfordii HOM05D001326 ORTHO05D004163 2.3e-12 76.3 109 45.0
Lj4P764T7 Lonicera japonica HOM05D001326 ORTHO05D004163 3.0e-12 75.9 64 54.7
Nn5g30440 Nelumbo nucifera HOM05D001326 ORTHO05D004163 5.1e-12 75.1 100 45.0
Zm00001eb215760 Zea mays HOM05D001326 ORTHO05D004163 6.7e-12 74.7 127 41.7
Zm00001eb243250 Zea mays HOM05D001326 ORTHO05D004163 6.7e-12 74.7 127 41.7
Zm00001eb339210 Zea mays HOM05D001326 ORTHO05D004163 6.7e-12 74.7 124 41.9
Zm00001eb007170 Zea mays HOM05D001326 ORTHO05D004163 1.1e-11 73.9 125 43.2
Aqoxy6G02840 Aquilegia oxysepala HOM05D001326 ORTHO05D004163 1.5e-11 73.6 116 40.5
HPP92_023698 Vanilla planifolia HOM05D001326 ORTHO05D004163 1.5e-11 73.6 118 42.4
Os03g0209000 Oryza sativa ssp. japonica HOM05D001326 ORTHO05D004163 1.9e-11 73.2 127 38.6
Gohir.D05G264900 Gossypium hirsutum HOM05D001326 ORTHO05D004163 2.5e-11 72.8 128 39.8
HPP92_004637 Vanilla planifolia HOM05D001326 ORTHO05D004163 2.5e-11 72.8 136 40.4
Carub.0008s0565 Capsella rubella HOM05D001326 ORTHO05D004163 3.3e-11 72.4 89 46.1
DCAR_012800 Daucus carota HOM05D001326 ORTHO05D004163 4.3e-11 72.0 96 47.9
Manes.12G114500 Manihot esculenta HOM05D001326 ORTHO05D004163 4.3e-11 72.0 110 40.0
Eucgr.H02599 Eucalyptus grandis HOM05D001326 ORTHO05D004163 7.4e-11 71.2 113 36.3
Lj5g0001031 Lotus japonicus HOM05D001326 ORTHO05D004163 7.4e-11 71.2 89 47.2
HPP92_007849 Vanilla planifolia HOM05D001326 ORTHO05D004163 7.4e-11 71.2 130 38.5
Zm00001eb314640 Zea mays HOM05D001326 ORTHO05D004163 7.4e-11 71.2 125 42.4
SEGI_33127 Sequoiadendron giganteum HOM05D001326 ORTHO05D004163 9.6e-11 70.9 116 38.8
vmacro23334 Vaccinium macrocarpon HOM05D001326 ORTHO05D004163 6.2e-10 68.2 57 61.4
ATR0205G017 Amborella trichopoda HOM05D001326 ORTHO05D004163 1.1e-09 67.4 96 41.7
Eucgr.F00159 Eucalyptus grandis HOM05D001326 ORTHO05D004163 1.4e-09 67.0 122 33.6
Zm00001eb326490 Zea mays HOM05D001326 ORTHO05D004163 1.4e-09 67.0 140 34.3
Actinidia33349 Actinidia chinensis HOM05D001326 ORTHO05D004163 1.8e-09 66.6 101 43.6
MBI16_g04493_MAGBIO Magnolia biondii HOM05D001326 ORTHO05D004163 4.0e-09 65.5 101 41.6
CANSAT01G2404 Cannabis sativa HOM05D001326 ORTHO05D004163 6.9e-09 64.7 104 40.4
Thhalv10003281m.g Eutrema salsugineum HOM05D001326 ORTHO05D004163 9.0e-09 64.3 134 36.6
CDE07G0413 Ceratophyllum demersum HOM05D001326 ORTHO05D004163 1.3e-07 60.5 126 39.7
Sp2g07850 Schrenkiella parvula HOM05D001326 ORTHO05D004163 2.9e-07 59.3 78 42.3
AT5G27940 Arabidopsis thaliana HOM05D001326 ORTHO05D004163 6.4e-07 58.2 87 37.9
RcHm_v2.0_Chr4g0416981 Rosa chinensis HOM05D001326 ORTHO05D002471 1.4e-06 57.0 105 30.5
unitig_8.g3368 Utricularia gibba HOM05D001326 ORTHO05D004163 1.4e-06 57.0 86 38.4
DCAR_029743 Daucus carota HOM05D000792 ORTHO05D004195 1.9e-06 56.6 87 34.5
Eucgr.H03559 Eucalyptus grandis HOM05D001326 ORTHO05D002471 2.4e-06 56.2 99 31.3
Prupe.1G154700 Prunus persica HOM05D001326 ORTHO05D002471 3.2e-06 55.8 105 28.6
PGR004G0209 Punica granatum HOM05D001326 ORTHO05D002471 3.2e-06 55.8 99 30.3
FvH4_4g14980 Fragaria vesca HOM05D001326 ORTHO05D002471 4.2e-06 55.5 120 29.2
ECA246G1900 Erigeron canadensis HOM05D001326 ORTHO05D002471 5.5e-06 55.1 100 32.0
Sabra08G0114100 Salix brachista HOM05D001326 ORTHO05D002471 5.5e-06 55.1 96 31.2
SHI00412 Sapria himalayana HOM05D001326 ORTHO05D002471 5.5e-06 55.1 111 29.7
Zm00001eb108360 Zea mays HOM05D001326 ORTHO05D004163 5.5e-06 55.1 115 35.7
A10p20360 Brassica napus HOM05D001326 ORTHO05D002471 7.1e-06 54.7 113 31.9
ECA247G1743 Erigeron canadensis HOM05D001326 ORTHO05D002471 7.1e-06 54.7 96 32.3
MD16G1187900 Malus domestica HOM05D001326 ORTHO05D002471 7.1e-06 54.7 121 29.8
Glyma.20G143300 Glycine max HOM05D001326 ORTHO05D002471 9.3e-06 54.3 103 29.1


User provided reference genes

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