Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_578.g16538 Utricularia gibba HOM05D037079 ORTHO05D037813 5.0e-260 900.6 456 100.0
unitig_8.g5029 Utricularia gibba HOM05D037079 ORTHO05D037813 1.0e-116 424.5 429 57.8
unitig_19.g30018 Utricularia gibba HOM05D037079 ORTHO05D037813 1.6e-109 400.6 393 58.8
MSTRG.25076 Avicennia marina HOM05D000187 ORTHO05D000230 2.6e-38 164.1 429 33.6
MSTRG.1069 Avicennia marina HOM05D000187 ORTHO05D000230 3.7e-37 160.2 423 34.5
MSTRG.24354 Avicennia marina HOM05D000187 ORTHO05D000230 2.5e-33 147.5 433 35.1
SalBow6G5553 Salvia bowleyana HOM05D000187 ORTHO05D000230 3.1e-28 130.6 405 31.4
Oeu021388.1 Olea europaea HOM05D000187 ORTHO05D000230 1.2e-27 128.6 431 32.3
Peaxi162Scf00503g00314 Petunia axillaris HOM05D000187 ORTHO05D000230 2.5e-25 120.9 434 29.0
Nitab4.5_0006769g0060 Nicotiana tabacum HOM05D000187 ORTHO05D000230 4.2e-25 120.2 437 29.1
Nitab4.5_0000287g0070 Nicotiana tabacum HOM05D000187 ORTHO05D000230 8.0e-24 115.9 435 28.3
Oeu057264.1 Olea europaea HOM05D000187 ORTHO05D000230 5.2e-23 113.2 400 31.5
Oeu049993.1 Olea europaea HOM05D000187 ORTHO05D000230 7.5e-22 109.4 434 30.2
Lj4C61T9 Lonicera japonica HOM05D000187 ORTHO05D000230 6.3e-21 106.3 441 28.8
unitig_32.g11125 Utricularia gibba HOM05D000187 ORTHO05D000230 6.3e-21 106.3 423 30.3
MD08G1097400 Malus domestica HOM05D000187 ORTHO05D000230 4.1e-20 103.6 420 29.8
Hma1.2p1_0360F.1_g135710 Hydrangea macrophylla HOM05D000187 ORTHO05D000230 1.3e-18 98.6 424 28.5
Prupe.1G432700 Prunus persica HOM05D000187 ORTHO05D000230 2.9e-18 97.4 429 28.9
Hma1.2p1_1072F.1_g254190 Hydrangea macrophylla HOM05D000187 ORTHO05D000230 5.0e-18 96.7 423 28.8
MD15G1079700 Malus domestica HOM05D000187 ORTHO05D000230 6.5e-18 96.3 418 28.9
Oeu012954.1 Olea europaea HOM05D000187 ORTHO05D000230 7.2e-17 92.8 394 28.2
PGSC0003DMG400007954 Solanum tuberosum HOM05D000187 ORTHO05D000230 9.4e-17 92.4 431 26.5
CSS0010742 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D000230 1.6e-16 91.7 414 27.5
Lj4C769G12 Lonicera japonica HOM05D000187 ORTHO05D000230 2.7e-16 90.9 356 28.1
FvH4_2g34090 Fragaria vesca HOM05D000187 ORTHO05D000230 1.0e-15 89.0 435 26.9
DCAR_008801 Daucus carota HOM05D000187 ORTHO05D000230 2.3e-15 87.8 426 27.0
FAN27G0573 Fragaria x ananassa HOM05D000187 ORTHO05D000230 4.0e-15 87.0 427 27.2
Sopen12g030650 Solanum pennellii HOM05D000187 ORTHO05D000230 4.0e-15 87.0 421 28.0
FAN20G2802 Fragaria x ananassa HOM05D000187 ORTHO05D000230 8.8e-15 85.9 427 27.2
FAN15G1912 Fragaria x ananassa HOM05D000187 ORTHO05D000230 1.5e-14 85.1 427 27.2
FAN24G2489 Fragaria x ananassa HOM05D000187 ORTHO05D000230 1.5e-14 85.1 435 26.4
Sopen04g032280 Solanum pennellii HOM05D000187 ORTHO05D000230 1.5e-14 85.1 431 26.7
Thecc.08G003700 Theobroma cacao HOM05D000187 ORTHO05D000230 1.5e-14 85.1 414 28.3
Dinv35939 Davidia involucrata HOM05D000187 ORTHO05D000230 2.0e-14 84.7 425 27.8
TAR376G0642 Trochodendron aralioides HOM05D000187 ORTHO05D000230 2.0e-14 84.7 434 26.5
QL02p004379 Quercus lobata HOM05D000187 ORTHO05D000230 3.4e-14 84.0 426 27.9
Solyc04g078680.4 Solanum lycopersicum HOM05D000187 ORTHO05D000230 4.4e-14 83.6 437 26.3
CiPaw.15G054500 Carya illinoinensis HOM05D000187 ORTHO05D000230 1.7e-13 81.6 434 27.4
PGSC0003DMG400015408 Solanum tuberosum HOM05D000187 ORTHO05D000230 1.7e-13 81.6 398 28.1
Nn1g04799 Nelumbo nucifera HOM05D000187 ORTHO05D000230 2.8e-13 80.9 407 27.8
Actinidia01095 Actinidia chinensis HOM05D000187 ORTHO05D000230 3.7e-13 80.5 401 26.9
RcHm_v2.0_Chr6g0308261 Rosa chinensis HOM05D000187 ORTHO05D000230 3.7e-13 80.5 427 26.9
Actinidia22646 Actinidia chinensis HOM05D000187 ORTHO05D000230 4.8e-13 80.1 413 26.2
Potri.002G124300 Populus trichocarpa HOM05D000187 ORTHO05D000230 1.4e-12 78.6 420 27.1
vmacro21501 Vaccinium macrocarpon HOM05D000187 ORTHO05D000230 1.8e-12 78.2 425 26.6
Migut.N02748 Erythranthe guttata HOM05D000187 ORTHO05D000230 3.1e-12 77.4 292 31.8
Manes.18G039900 Manihot esculenta HOM05D000187 ORTHO05D000230 4.1e-12 77.0 429 27.5
Manes.18G039700 Manihot esculenta HOM05D000187 ORTHO05D000230 7.0e-12 76.3 434 27.4
Peaxi162Scf01027g00023 Petunia axillaris HOM05D000187 ORTHO05D000230 7.0e-12 76.3 431 27.4
Duzib093G1398 Durio zibethinus HOM05D000187 ORTHO05D000230 9.1e-12 75.9 419 27.4
COL.COLO4_26547 Corchorus olitorius HOM05D000187 ORTHO05D000230 4.5e-11 73.6 424 27.8
Duzib116G0443 Durio zibethinus HOM05D000187 ORTHO05D000230 5.9e-11 73.2 406 26.8
Cc10_g04640 Coffea canephora HOM05D000187 ORTHO05D000230 1.7e-10 71.6 328 27.7
EL10As7g23754 Beta vulgaris HOM05D000187 ORTHO05D000230 2.9e-10 70.9 428 25.2
PSO170G6274 Papaver somniferum HOM05D000187 ORTHO05D000230 2.9e-10 70.9 402 27.1
PSO210G7164 Papaver somniferum HOM05D000187 ORTHO05D000230 2.9e-10 70.9 402 27.1
TAR381G0132 Trochodendron aralioides HOM05D000187 ORTHO05D000230 3.8e-10 70.5 435 25.3
Lj1g0026591 Lotus japonicus HOM05D000187 ORTHO05D000230 8.6e-10 69.3 408 25.5
AUR62042727 Chenopodium quinoa HOM05D000187 ORTHO05D000230 3.3e-09 67.4 427 24.1
Nitab4.5_0004376g0070 Nicotiana tabacum HOM05D000187 ORTHO05D000230 5.5e-09 66.6 425 25.4
CANSAT25G2996 Cannabis sativa HOM05D000187 ORTHO05D000230 7.2e-09 66.2 430 26.3
Ah.11g042940 Amaranthus hybridus HOM05D000187 ORTHO05D000230 1.2e-08 65.5 437 24.5
Actinidia08286 Actinidia chinensis HOM05D000187 ORTHO05D000230 1.6e-08 65.1 335 26.6
Dinv39290 Davidia involucrata HOM05D000187 ORTHO05D000230 1.6e-08 65.1 402 25.1
Glyma.04G039800 Glycine max HOM05D000187 ORTHO05D000230 1.6e-08 65.1 408 24.5
Gohir.D05G207300 Gossypium hirsutum HOM05D000187 ORTHO05D000230 1.6e-08 65.1 420 26.9
AUR62038831 Chenopodium quinoa HOM05D000187 ORTHO05D000230 2.1e-08 64.7 426 23.2
Nitab4.5_0006935g0020 Nicotiana tabacum HOM05D000187 ORTHO05D000230 2.8e-08 64.3 426 25.8
Sc15g0005980 Simmondsia chinensis HOM05D000187 ORTHO05D000230 2.3e-07 61.2 330 26.1
TPR.G3771 Trifolium pratense HOM05D000187 ORTHO05D000230 2.3e-07 61.2 333 24.6
Nitab4.5_0001396g0010 Nicotiana tabacum HOM05D000187 ORTHO05D000230 4.0e-07 60.5 416 25.2
Rhsim07G0227200 Rhododendron simsii HOM05D000187 ORTHO05D000230 2.0e-06 58.2 411 26.3
VMungo0647G1412 Vigna mungo HOM05D000187 ORTHO05D000230 3.4e-06 57.4 365 25.2


User provided reference genes

Program Settings