Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_578.g16519 Utricularia gibba HOM05D004630 ORTHO05D005727 3.4e-55 218.0 104 100.0
Migut.N03011 Erythranthe guttata HOM05D004630 ORTHO05D005727 4.6e-28 127.9 93 67.7
SalBow6G4274 Salvia bowleyana HOM05D004630 ORTHO05D005727 4.6e-28 127.9 96 66.7
Migut.O00493 Erythranthe guttata HOM05D004630 ORTHO05D005727 1.8e-27 125.9 93 66.7
Solyc07g014610.4 Solanum lycopersicum HOM05D004630 ORTHO05D005727 1.8e-27 125.9 88 68.2
Sopen07g005480 Solanum pennellii HOM05D004630 ORTHO05D005727 1.8e-27 125.9 88 68.2
MSTRG.13783 Avicennia marina HOM05D004630 ORTHO05D005727 3.0e-27 125.2 107 62.6
CAN.G689.26 Capsicum annuum HOM05D004630 ORTHO05D005727 3.0e-27 125.2 93 63.4
PGSC0003DMG400020700 Solanum tuberosum HOM05D004630 ORTHO05D005727 8.7e-27 123.6 88 67.0
Nitab4.5_0000848g0060 Nicotiana tabacum HOM05D004630 ORTHO05D005727 1.9e-26 122.5 93 62.4
Nitab4.5_0004432g0030 Nicotiana tabacum HOM05D004630 ORTHO05D005727 1.9e-26 122.5 113 55.8
SalBow2G2706 Salvia bowleyana HOM05D004630 ORTHO05D005727 2.5e-26 122.1 95 65.3
SalBow7G2764 Salvia bowleyana HOM05D004630 ORTHO05D005727 7.4e-26 120.6 95 64.2
Lj9C588T4 Lonicera japonica HOM05D004630 ORTHO05D005727 3.7e-25 118.2 104 61.5
Oeu028192.1 Olea europaea HOM05D004630 ORTHO05D005727 6.2e-25 117.5 106 58.5
Medtr4g123557 Medicago truncatula HOM05D004630 ORTHO05D005727 8.2e-25 117.1 83 66.3
RcHm_v2.0_Chr4g0428061 Rosa chinensis HOM05D004630 ORTHO05D005727 1.4e-24 116.3 93 61.3
Ca_21358_v3 Cicer arietinum L. HOM05D004630 ORTHO05D005727 2.4e-24 115.5 87 64.4
Aqoxy7G01739 Aquilegia oxysepala HOM05D004630 ORTHO05D005727 3.1e-24 115.2 86 62.8
FvH4_4g21830 Fragaria vesca HOM05D004630 ORTHO05D005727 5.3e-24 114.4 86 64.0
FAN12G2264 Fragaria x ananassa HOM05D004630 ORTHO05D005727 5.3e-24 114.4 86 64.0
QL02p088183 Quercus lobata HOM05D004630 ORTHO05D005727 6.9e-24 114.0 84 66.7
Lj4g0015635 Lotus japonicus HOM05D004630 ORTHO05D005727 1.5e-23 112.8 93 60.2
Dinv43828 Davidia involucrata HOM05D004630 ORTHO05D005727 2.6e-23 112.1 88 62.5
Manes.11G127500 Manihot esculenta HOM05D004630 ORTHO05D005727 4.5e-23 111.3 105 55.2
CSS0009392 Camellia sinensis var. sinensis HOM05D004630 ORTHO05D005727 7.6e-23 110.5 107 56.1
CSS0039221 Camellia sinensis var. sinensis HOM05D004630 ORTHO05D005727 7.6e-23 110.5 107 56.1
FAN07G0643 Fragaria x ananassa HOM05D004630 ORTHO05D005727 7.6e-23 110.5 99 58.6
PSO210G5682 Papaver somniferum HOM05D004630 ORTHO05D005727 1.0e-22 110.2 87 59.8
Psat4g020520 Pisum sativum HOM05D004630 ORTHO05D005727 1.0e-22 110.2 84 65.5
Sed0000779 Sechium edule HOM05D004630 ORTHO05D005727 1.0e-22 110.2 95 57.9
TPR.G12666 Trifolium pratense HOM05D004630 ORTHO05D005727 1.0e-22 110.2 84 65.5
TAR636G2703 Trochodendron aralioides HOM05D004630 ORTHO05D005727 1.3e-22 109.8 96 59.4
CANSAT11G0088 Cannabis sativa HOM05D004630 ORTHO05D005727 1.7e-22 109.4 98 58.2
Lj2g0001674 Lotus japonicus HOM05D004630 ORTHO05D005727 2.2e-22 109.0 94 61.7
Ciclev10018715m.g Citrus clementina HOM05D004630 ORTHO05D005727 2.9e-22 108.6 92 60.9
Ciclev10023873m.g Citrus clementina HOM05D004630 ORTHO05D005727 2.9e-22 108.6 92 60.9
Nn7g38087 Nelumbo nucifera HOM05D004630 ORTHO05D005727 3.8e-22 108.2 108 50.0
Cpa.g.sc80.37 Carica papaya HOM05D004630 ORTHO05D005727 5.0e-22 107.8 103 52.4
Peaxi162Scf00341g00622 Petunia axillaris HOM05D004630 ORTHO05D005727 5.0e-22 107.8 101 55.4
Hma1.2p1_0482F.1_g162689 Hydrangea macrophylla HOM05D004630 ORTHO05D005727 6.5e-22 107.5 90 60.0
Hma1.2p1_1944F.1_g308540 Hydrangea macrophylla HOM05D004630 ORTHO05D005727 6.5e-22 107.5 90 60.0
Hund12270 Selenicereus undatus HOM05D004630 ORTHO05D005727 8.4e-22 107.1 91 57.1
Ah.12g052160 Amaranthus hybridus HOM05D004630 ORTHO05D005727 1.1e-21 106.7 91 60.4
Gohir.D01G081000 Gossypium hirsutum HOM05D004630 ORTHO05D005727 1.4e-21 106.3 91 62.6
Gorai.002G105900 Gossypium raimondii HOM05D004630 ORTHO05D005727 1.4e-21 106.3 91 62.6
Thecc.07G164200 Theobroma cacao HOM05D004630 ORTHO05D005727 1.4e-21 106.3 91 61.5
GSVIVG01034228001 Vitis vinifera HOM05D004630 ORTHO05D005727 1.4e-21 106.3 93 55.9
ClCG03G006320 Citrullus lanatus HOM05D004630 ORTHO05D005727 1.9e-21 105.9 88 60.2
Eucgr.B01002 Eucalyptus grandis HOM05D004630 ORTHO05D005727 2.5e-21 105.5 91 60.4
HPP92_010565 Vanilla planifolia HOM05D004630 ORTHO05D005727 2.5e-21 105.5 91 54.9
Gohir.A01G096700 Gossypium hirsutum HOM05D004630 ORTHO05D005727 3.2e-21 105.1 91 61.5
Phvul.003G124900 Phaseolus vulgaris HOM05D004630 ORTHO05D005727 3.2e-21 105.1 87 63.2
Glyma.13G116800 Glycine max HOM05D004630 ORTHO05D005727 5.5e-21 104.4 87 60.9
Atru.chr1.2080 Acer truncatum HOM05D004630 ORTHO05D005727 7.2e-21 104.0 83 61.4
BcaB08g36795 Brassica carinata HOM05D004630 ORTHO05D005727 9.3e-21 103.6 87 59.8
CARHR195960 Cardamine hirsuta HOM05D004630 ORTHO05D005727 9.3e-21 103.6 97 54.6
Sabra03G0033900 Salix brachista HOM05D004630 ORTHO05D005727 9.3e-21 103.6 95 58.9
BcaC04g18817 Brassica carinata HOM05D004630 ORTHO05D005727 1.2e-20 103.2 90 58.9
THA.LOC104820866 Tarenaya hassleriana HOM05D004630 ORTHO05D005727 1.2e-20 103.2 102 52.0
VMungo1215G1222 Vigna mungo HOM05D004630 ORTHO05D005727 1.2e-20 103.2 87 60.9
Aa31LG11G12420 Aethionema arabicum HOM05D004630 ORTHO05D005727 1.6e-20 102.8 104 53.8
Cc03_g11340 Coffea canephora HOM05D004630 ORTHO05D005727 1.6e-20 102.8 124 49.2
CsaV3_1G037410 Cucumis sativus L. HOM05D004630 ORTHO05D005727 2.1e-20 102.4 95 52.6
Duzib187G1410 Durio zibethinus HOM05D004630 ORTHO05D005727 2.7e-20 102.1 91 60.4
EL10Ac5g12859 Beta vulgaris HOM05D004630 ORTHO05D005727 3.5e-20 101.7 100 52.0
BraA10t44274Z Brassica rapa HOM05D004630 ORTHO05D005727 3.5e-20 101.7 87 58.6
HanXRQChr17g0554761 Helianthus annuus HOM05D004630 ORTHO05D005727 3.5e-20 101.7 85 63.5
MD13G1136600 Malus domestica HOM05D004630 ORTHO05D005727 3.5e-20 101.7 91 57.1
MELO3C002801.2 Cucumis melo HOM05D004630 ORTHO05D005727 4.6e-20 101.3 95 51.6
PGR031G0128 Punica granatum HOM05D004630 ORTHO05D005727 4.6e-20 101.3 89 60.7
Actinidia21906 Actinidia chinensis HOM05D004630 ORTHO05D005727 6.1e-20 100.9 99 49.5
arahy.Tifrunner.gnm1.ann1.N7874Q Arachis hypogaea HOM05D004630 ORTHO05D005727 6.1e-20 100.9 86 60.5
C09p59940 Brassica napus HOM05D004630 ORTHO05D005727 7.9e-20 100.5 90 58.9
BolC9t58830H Brassica oleracea HOM05D004630 ORTHO05D005727 7.9e-20 100.5 90 58.9
MBI14_g20897_MAGBIO Magnolia biondii HOM05D004630 ORTHO05D005727 7.9e-20 100.5 106 51.9
Sc13g0008160 Simmondsia chinensis HOM05D004630 ORTHO05D005727 7.9e-20 100.5 84 59.5
ATR0019G053 Amborella trichopoda HOM05D004630 ORTHO05D005727 1.0e-19 100.1 87 56.3
AL6G28300 Arabidopsis lyrata HOM05D004630 ORTHO05D005727 1.0e-19 100.1 93 58.1
AT5G17250 Arabidopsis thaliana HOM05D004630 ORTHO05D005727 1.0e-19 100.1 93 58.1
MD16G1131900 Malus domestica HOM05D004630 ORTHO05D005727 1.8e-19 99.4 91 56.0
A10p22150 Brassica napus HOM05D004630 ORTHO05D005727 2.3e-19 99.0 88 56.8
Sp6g26980 Schrenkiella parvula HOM05D004630 ORTHO05D005727 2.3e-19 99.0 93 54.8
arahy.Tifrunner.gnm1.ann1.W5Q7UV Arachis hypogaea HOM05D004630 ORTHO05D005727 3.0e-19 98.6 83 61.4
Thhalv10012592m.g Eutrema salsugineum HOM05D004630 ORTHO05D005727 5.1e-19 97.8 96 54.2
Potri.003G059300 Populus trichocarpa HOM05D004630 ORTHO05D005727 1.1e-18 96.7 88 56.8
CDE08G0728 Ceratophyllum demersum HOM05D004630 ORTHO05D005727 1.5e-18 96.3 93 53.8
Rhsim05G0234800 Rhododendron simsii HOM05D004630 ORTHO05D005727 1.5e-18 96.3 90 55.6
SHI11357 Sapria himalayana HOM05D004630 ORTHO05D005727 2.5e-18 95.5 90 56.7
SEGI_14972 Sequoiadendron giganteum HOM05D004630 ORTHO05D005727 2.5e-18 95.5 105 46.7
FAN12G0960 Fragaria x ananassa HOM05D004630 ORTHO05D005727 7.4e-18 94.0 78 57.7
Carub.0006s1544 Capsella rubella HOM05D004630 ORTHO05D005727 2.8e-17 92.0 98 51.0
Lalb_Chr12g0200461 Lupinus albus HOM05D004630 ORTHO05D005727 1.1e-16 90.1 86 52.3
Haze_25597 Corylus avellana HOM05D004630 ORTHO05D005727 3.4e-15 85.1 122 45.1
Os10g0170300 Oryza sativa ssp. japonica HOM05D004630 ORTHO05D005727 7.7e-15 84.0 82 53.7
Pp3c19_7340 Physcomitrium patens HOM05D004630 ORTHO05D005727 3.2e-13 78.6 134 35.1
Rhsim10G0128800 Rhododendron simsii HOM05D004630 ORTHO05D005727 9.4e-13 77.0 84 47.6
ECA233G6037 Erigeron canadensis HOM05D004630 ORTHO05D005727 2.7e-12 75.5 53 67.9
Mapoly0027s0070 Marchantia polymorpha HOM05D004630 ORTHO05D005727 1.8e-11 72.8 131 33.6
Dinv21516 Davidia involucrata HOM05D004630 ORTHO05D005727 3.9e-11 71.6 72 47.2
BcaB05g24232 Brassica carinata HOM05D004630 ORTHO05D005727 1.3e-09 66.6 95 45.3
Cfa023376 Carpinus fangiana HOM05D004630 ORTHO05D005727 7.7e-07 57.4 87 41.4
SMO116G0486 Selaginella moellendorffii HOM05D004630 ORTHO05D005727 2.2e-06 55.8 70 41.4


User provided reference genes

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