Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_578.g16333 Utricularia gibba HOM05D003670 ORTHO05D004767 2.4e-223 778.5 380 100.0
Migut.H01671 Erythranthe guttata HOM05D003670 ORTHO05D004767 3.7e-160 568.5 340 78.2
CSS0006756 Camellia sinensis var. sinensis HOM05D003670 ORTHO05D004767 3.9e-157 558.5 342 76.3
Gohir.D13G127300 Gossypium hirsutum HOM05D003670 ORTHO05D004767 8.1e-155 550.8 346 73.4
MSTRG.14566 Avicennia marina HOM05D003670 ORTHO05D004767 3.1e-154 548.9 350 75.1
unitig_8.g4750 Utricularia gibba HOM05D003670 ORTHO05D004767 3.1e-154 548.9 337 79.5
Cc05_g16310 Coffea canephora HOM05D003670 ORTHO05D004767 5.2e-154 548.1 346 74.6
Sp5g34280 Schrenkiella parvula HOM05D003670 ORTHO05D004767 5.2e-154 548.1 338 74.6
Lsat_1_v5_gn_7_110680 Lactuca sativa HOM05D003670 ORTHO05D004767 1.5e-153 546.6 342 74.6
Gohir.A13G123400 Gossypium hirsutum HOM05D003670 ORTHO05D004767 2.0e-153 546.2 346 72.5
CiPaw.11G061900 Carya illinoinensis HOM05D003670 ORTHO05D004767 3.4e-153 545.4 342 74.6
GSVIVG01036786001 Vitis vinifera HOM05D003670 ORTHO05D004767 3.4e-153 545.4 346 72.5
AL2G39700 Arabidopsis lyrata HOM05D003670 ORTHO05D004767 7.6e-153 544.3 337 74.2
Gorai.013G142500 Gossypium raimondii HOM05D003670 ORTHO05D004767 7.6e-153 544.3 347 72.9
Rhsim06G0242300 Rhododendron simsii HOM05D003670 ORTHO05D004767 9.9e-153 543.9 342 73.7
Oeu002796.1 Olea europaea HOM05D003670 ORTHO05D004767 1.3e-152 543.5 328 76.5
Nitab4.5_0006241g0010 Nicotiana tabacum HOM05D003670 ORTHO05D004767 2.2e-152 542.7 346 72.3
COL.COLO4_32264 Corchorus olitorius HOM05D003670 ORTHO05D004767 2.9e-152 542.3 343 73.2
Manes.06G175700 Manihot esculenta HOM05D003670 ORTHO05D004767 2.9e-152 542.3 345 71.6
ECA236G3562 Erigeron canadensis HOM05D003670 ORTHO05D004767 4.9e-152 541.6 318 78.0
CARHR016930 Cardamine hirsuta HOM05D003670 ORTHO05D004767 6.4e-152 541.2 344 72.4
HanXRQChr11g0335601 Helianthus annuus HOM05D003670 ORTHO05D004767 6.4e-152 541.2 342 74.0
Aa31LG4G1790 Aethionema arabicum HOM05D003670 ORTHO05D004767 1.1e-151 540.4 339 74.9
Thhalv10018699m.g Eutrema salsugineum HOM05D003670 ORTHO05D004767 1.4e-151 540.0 338 73.4
Hma1.2p1_0151F.1_g067325 Hydrangea macrophylla HOM05D003670 ORTHO05D004767 4.1e-151 538.5 340 72.6
Peaxi162Scf00452g00333 Petunia axillaris HOM05D003670 ORTHO05D004767 4.1e-151 538.5 342 72.2
Nitab4.5_0000029g0340 Nicotiana tabacum HOM05D003670 ORTHO05D004767 5.4e-151 538.1 342 73.4
QL04p088520 Quercus lobata HOM05D003670 ORTHO05D004767 1.2e-150 537.0 371 68.5
PGSC0003DMG400022232 Solanum tuberosum HOM05D003670 ORTHO05D004767 1.6e-150 536.6 344 72.7
CARHR072860 Cardamine hirsuta HOM05D003670 ORTHO05D004767 2.1e-150 536.2 314 77.1
BcaB02g07206 Brassica carinata HOM05D003670 ORTHO05D004767 2.7e-150 535.8 343 72.0
Carub.0002s2610 Capsella rubella HOM05D003670 ORTHO05D004767 2.7e-150 535.8 338 73.1
Sopen07g034740 Solanum pennellii HOM05D003670 ORTHO05D004767 2.7e-150 535.8 346 72.5
TAR583G0001 Trochodendron aralioides HOM05D003670 ORTHO05D004767 2.7e-150 535.8 344 72.7
Carub.0001s1620 Capsella rubella HOM05D003670 ORTHO05D004767 7.8e-150 534.3 326 74.5
TWI39G0091 Tripterygium wilfordii HOM05D003670 ORTHO05D004767 7.8e-150 534.3 346 70.8
Potri.007G069300 Populus trichocarpa HOM05D003670 ORTHO05D004767 1.0e-149 533.9 342 71.6
PGR031G1669 Punica granatum HOM05D003670 ORTHO05D004767 1.0e-149 533.9 348 70.7
MD05G1228000 Malus domestica HOM05D003670 ORTHO05D004767 1.3e-149 533.5 330 73.9
Solyc07g066580.3 Solanum lycopersicum HOM05D003670 ORTHO05D004767 1.3e-149 533.5 344 72.7
Duzib187G0441 Durio zibethinus HOM05D003670 ORTHO05D004767 1.7e-149 533.1 318 75.8
AT1G79230 Arabidopsis thaliana HOM05D003670 ORTHO05D004767 2.3e-149 532.7 330 73.6
CsaV3_3G018980 Cucumis sativus L. HOM05D003670 ORTHO05D004767 3.0e-149 532.3 346 70.5
TPR.G33813 Trifolium pratense HOM05D003670 ORTHO05D004767 3.0e-149 532.3 349 69.6
Nn7g37780 Nelumbo nucifera HOM05D003670 ORTHO05D004767 5.1e-149 531.6 343 72.9
Peaxi162Scf00006g00159 Petunia axillaris HOM05D003670 ORTHO05D004767 5.1e-149 531.6 323 74.9
Prupe.4G134300 Prunus persica HOM05D003670 ORTHO05D004767 5.1e-149 531.6 328 74.7
RcHm_v2.0_Chr5g0024611 Rosa chinensis HOM05D003670 ORTHO05D004767 5.1e-149 531.6 350 71.7
A07p27230 Brassica napus HOM05D003670 ORTHO05D004767 8.7e-149 530.8 344 71.5
BraA07t30367Z Brassica rapa HOM05D003670 ORTHO05D004767 8.7e-149 530.8 344 71.5
FvH4_3g14990 Fragaria vesca HOM05D003670 ORTHO05D004767 8.7e-149 530.8 350 70.6
THA.LOC104812362 Tarenaya hassleriana HOM05D003670 ORTHO05D004767 1.1e-148 530.4 341 71.6
FAN25G1710 Fragaria x ananassa HOM05D003670 ORTHO05D004767 1.5e-148 530.0 347 70.6
Ciclev10005196m.g Citrus clementina HOM05D003670 ORTHO05D004767 2.5e-148 529.3 318 76.4
MBI02_g18168_MAGBIO Magnolia biondii HOM05D003670 ORTHO05D004767 2.5e-148 529.3 345 71.0
Nitab4.5_0005765g0040 Nicotiana tabacum HOM05D003670 ORTHO05D004767 2.5e-148 529.3 350 71.4
FAN11G2825 Fragaria x ananassa HOM05D003670 ORTHO05D004767 3.3e-148 528.9 350 70.3
BcaC08g45368 Brassica carinata HOM05D003670 ORTHO05D004767 4.3e-148 528.5 344 71.5
C06p30000 Brassica napus HOM05D003670 ORTHO05D004767 4.3e-148 528.5 344 71.5
BolC6t38160H Brassica oleracea HOM05D003670 ORTHO05D004767 4.3e-148 528.5 344 71.5
Thecc.07G180400 Theobroma cacao HOM05D003670 ORTHO05D004767 4.3e-148 528.5 344 71.5
CAN.G943.51 Capsicum annuum HOM05D003670 ORTHO05D004767 5.6e-148 528.1 347 70.9
FAN21G1395 Fragaria x ananassa HOM05D003670 ORTHO05D004767 5.6e-148 528.1 350 70.3
MD10G1208500 Malus domestica HOM05D003670 ORTHO05D004767 7.3e-148 527.7 324 75.3
PSO675G6901 Papaver somniferum HOM05D003670 ORTHO05D004767 7.3e-148 527.7 320 74.7
Psat1g013760 Pisum sativum HOM05D003670 ORTHO05D004767 7.3e-148 527.7 321 74.5
Manes.14G010300 Manihot esculenta HOM05D003670 ORTHO05D004767 1.2e-147 526.9 345 70.4
PSO541G1524 Papaver somniferum HOM05D003670 ORTHO05D004767 1.2e-147 526.9 358 69.0
A07p44350 Brassica napus HOM05D003670 ORTHO05D004767 2.1e-147 526.2 316 74.7
BolC5t30186H Brassica oleracea HOM05D003670 ORTHO05D004767 2.1e-147 526.2 321 74.5
Glyma.08G167100 Glycine max HOM05D003670 ORTHO05D004767 3.6e-147 525.4 312 76.6
Solyc02g078990.4 Solanum lycopersicum HOM05D003670 ORTHO05D004767 3.6e-147 525.4 330 73.0
TWI38G1711 Tripterygium wilfordii HOM05D003670 ORTHO05D004767 3.6e-147 525.4 342 71.1
ATR0763G120 Amborella trichopoda HOM05D003670 ORTHO05D004767 8.1e-147 524.2 347 72.3
Eucgr.F04458 Eucalyptus grandis HOM05D003670 ORTHO05D004767 8.1e-147 524.2 342 70.8
BraA07t31943Z Brassica rapa HOM05D003670 ORTHO05D004767 1.1e-146 523.9 316 74.7
Medtr2g067080 Medicago truncatula HOM05D003670 ORTHO05D004767 1.4e-146 523.5 323 73.1
C05p14650 Brassica napus HOM05D003670 ORTHO05D004767 1.8e-146 523.1 321 74.1
Thhalv10007910m.g Eutrema salsugineum HOM05D003670 ORTHO05D004767 1.8e-146 523.1 316 75.0
BcaC05g25571 Brassica carinata HOM05D003670 ORTHO05D004767 2.4e-146 522.7 321 74.1
Phvul.005G050400 Phaseolus vulgaris HOM05D003670 ORTHO05D004767 3.1e-146 522.3 314 76.4
VMungo1080G1660 Vigna mungo HOM05D003670 ORTHO05D004767 3.1e-146 522.3 314 76.4
Lj3g0014239 Lotus japonicus HOM05D003670 ORTHO05D004767 5.2e-146 521.5 317 74.4
AUR62037644 Chenopodium quinoa HOM05D003670 ORTHO05D004767 2.0e-145 519.6 308 76.0
Sopen02g023800 Solanum pennellii HOM05D003670 ORTHO05D004767 4.4e-145 518.5 318 74.8
Potri.005G095300 Populus trichocarpa HOM05D003670 ORTHO05D004767 7.6e-145 517.7 308 76.3
BcaB05g25180 Brassica carinata HOM05D003670 ORTHO05D004767 9.9e-145 517.3 316 75.9
CANSAT80G2697 Cannabis sativa HOM05D003670 ORTHO05D004767 1.3e-144 516.9 322 73.6
AUR62039184 Chenopodium quinoa HOM05D003670 ORTHO05D004767 1.3e-144 516.9 308 75.3
BraA06t24401Z Brassica rapa HOM05D003670 ORTHO05D004767 2.9e-144 515.8 328 73.5
Ca_03600_v3 Cicer arietinum L. HOM05D003670 ORTHO05D004767 3.8e-144 515.4 314 74.2
THA.LOC104813608 Tarenaya hassleriana HOM05D003670 ORTHO05D004767 3.8e-144 515.4 325 72.9
MSTRG.7076 Avicennia marina HOM05D003670 ORTHO05D004767 6.4e-144 514.6 314 74.8
Zm00001eb031400 Zea mays HOM05D003670 ORTHO05D004767 8.4e-144 514.2 320 74.1
EL10Ac2g03264 Beta vulgaris HOM05D003670 ORTHO05D004767 1.1e-143 513.8 308 74.7
Ah.10g033690 Amaranthus hybridus HOM05D003670 ORTHO05D004767 4.2e-143 511.9 334 71.3
Aqoxy1G01484 Aquilegia oxysepala HOM05D003670 ORTHO05D004767 5.4e-143 511.5 309 74.4
Aa31LG7G1000 Aethionema arabicum HOM05D003670 ORTHO05D004767 9.3e-143 510.8 314 74.2
Sabra07G0056700 Salix brachista HOM05D003670 ORTHO05D004767 1.2e-142 510.4 332 70.5
Os12g0608600 Oryza sativa ssp. japonica HOM05D003670 ORTHO05D004767 1.6e-142 510.0 319 73.7
Sabra05G0078800 Salix brachista HOM05D003670 ORTHO05D004767 2.1e-142 509.6 339 70.2
Sed0012107 Sechium edule HOM05D003670 ORTHO05D004767 2.1e-142 509.6 346 68.5
vmacro11699 Vaccinium macrocarpon HOM05D003670 ORTHO05D004767 3.5e-142 508.8 372 65.6
A06p12380 Brassica napus HOM05D003670 ORTHO05D004767 4.6e-142 508.4 321 71.7
Lalb_Chr25g0284691 Lupinus albus HOM05D003670 ORTHO05D004767 6.0e-142 508.1 348 69.0
BcaB02g06624 Brassica carinata HOM05D003670 ORTHO05D004767 2.3e-141 506.1 320 70.3
Oeu043724.2 Olea europaea HOM05D003670 ORTHO05D004767 1.1e-140 503.8 323 74.0
SGA_v2.0_scaffold186G40197 Striga asiatica HOM05D003670 ORTHO05D004767 2.5e-140 502.7 305 74.1
AL1G28600 Arabidopsis lyrata HOM05D003670 ORTHO05D004767 1.1e-138 497.3 316 71.2
Sp1g14610 Schrenkiella parvula HOM05D003670 ORTHO05D004767 1.8e-138 496.5 316 71.5
Cfa022976 Carpinus fangiana HOM05D003670 ORTHO05D004767 1.5e-137 493.4 346 67.3
HPP92_013192 Vanilla planifolia HOM05D003670 ORTHO05D004767 2.0e-137 493.0 322 70.8
AT1G16460 Arabidopsis thaliana HOM05D003670 ORTHO05D004767 1.7e-136 490.0 313 71.2
DCAR_019919 Daucus carota HOM05D003670 ORTHO05D004767 6.4e-136 488.0 318 72.6
Glyma.15G260300 Glycine max HOM05D003670 ORTHO05D004767 2.3e-133 479.6 287 76.7
Hund20101 Selenicereus undatus HOM05D003670 ORTHO05D004767 5.6e-132 474.9 324 68.8
Sc06g0002800 Simmondsia chinensis HOM05D003670 ORTHO05D004767 1.3e-131 473.8 292 75.7
ClCG05G009800 Citrullus lanatus HOM05D003670 ORTHO05D000003 3.7e-131 472.2 342 65.5
arahy.Tifrunner.gnm1.ann1.36F1KB Arachis hypogaea HOM05D003670 ORTHO05D004767 9.0e-130 467.6 275 78.5
Duzib213G1009 Durio zibethinus HOM05D003670 ORTHO05D004767 1.2e-129 467.2 352 64.8
DCAR_016837 Daucus carota HOM05D003670 ORTHO05D004767 6.0e-126 454.9 301 67.8
arahy.Tifrunner.gnm1.ann1.YZ7E83 Arachis hypogaea HOM05D003670 ORTHO05D004767 2.3e-125 453.0 275 77.5
SEGI_21826 Sequoiadendron giganteum HOM05D003670 ORTHO05D004767 6.7e-125 451.4 317 65.3
Lj2A15G76 Lonicera japonica HOM05D003670 ORTHO05D004767 9.6e-124 447.6 310 70.6
Nitab4.5_0000388g0140 Nicotiana tabacum HOM05D003670 ORTHO05D004767 2.1e-123 446.4 296 72.3
BcaC08g47490 Brassica carinata HOM05D003670 ORTHO05D004767 3.7e-123 445.7 319 66.8
MELO3C019489.2 Cucumis melo HOM05D003670 ORTHO05D004767 3.7e-123 445.7 293 69.6
C06p53140 Brassica napus HOM05D003670 ORTHO05D004767 9.0e-122 441.0 257 77.0
BolC6t40330H Brassica oleracea HOM05D003670 ORTHO05D004767 7.6e-121 438.0 291 70.1
Os02g0167100 Oryza sativa ssp. japonica HOM05D003670 ORTHO05D004767 4.9e-120 435.3 304 64.5
SGA_v2.0_scaffold49G18190 Striga asiatica HOM05D003670 ORTHO05D004767 2.7e-118 429.5 289 72.0
QL04p088965 Quercus lobata HOM05D003670 ORTHO05D004767 3.3e-116 422.5 241 79.3
Mapoly0058s0078 Marchantia polymorpha HOM05D003670 ORTHO05D004767 1.6e-115 420.2 327 58.4
Zm00001eb207410 Zea mays HOM05D003670 ORTHO05D004767 4.1e-114 415.6 336 59.2
AagrBONN_evm.TU.Sc2ySwM_344.5346 Anthoceros agrestis HOM05D003670 ORTHO05D004767 5.0e-112 408.7 346 55.2
Pp3c9_17670 Physcomitrium patens HOM05D003670 ORTHO05D004767 3.7e-107 392.5 327 57.5
Haze_07818 Corylus avellana HOM05D003670 ORTHO05D004767 1.2e-105 387.5 293 66.9
Dinv19592 Davidia involucrata HOM05D003670 ORTHO05D004767 1.7e-104 383.6 258 72.5
SMO119G0061 Selaginella moellendorffii HOM05D003670 ORTHO05D004767 6.5e-104 381.7 300 60.7
CDE06G2006 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 1.8e-98 363.6 246 67.1
Rhsim05G0210500 Rhododendron simsii HOM05D003670 ORTHO05D004767 1.3e-96 357.5 237 72.6
HPP92_013209 Vanilla planifolia HOM05D003670 ORTHO05D004767 1.7e-96 357.1 322 55.6
CDE02G0962 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 1.2e-86 324.3 234 64.5
Cpa.g.sc34.17 Carica papaya HOM05D003670 ORTHO05D004767 5.2e-85 318.9 230 67.4
FAN16G2550 Fragaria x ananassa HOM05D003670 ORTHO05D004767 1.2e-84 317.8 200 70.5
MD05G1228700 Malus domestica HOM05D003670 ORTHO05D004767 3.3e-84 316.2 198 70.7
Actinidia12766 Actinidia chinensis HOM05D003670 ORTHO05D004767 1.3e-83 314.3 203 75.4
RcHm_v2.0_Chr5g0024731 Rosa chinensis HOM05D003670 ORTHO05D004767 3.5e-73 279.6 221 66.1
CBR_g17038 Chara braunii HOM05D003670 ORTHO05D004767 4.2e-71 272.7 345 42.3
A02p22680 Brassica napus HOM05D003670 ORTHO05D004767 5.5e-71 272.3 371 43.7
C02p36310 Brassica napus HOM05D003670 ORTHO05D004767 3.7e-67 259.6 218 59.6
MCO09G588 Micromonas commoda HOM05D003670 ORTHO05D004767 1.8e-66 257.3 297 45.5
Cre13.g607050 Chlamydomonas reinhardtii HOM05D003670 ORTHO05D004767 2.7e-65 253.4 300 43.7
PRCOL_00006295 Prasinoderma coloniale HOM05D003670 ORTHO05D004767 5.0e-64 249.2 308 43.5
Hma1.2p1_0269F.1_g107810 Hydrangea macrophylla HOM05D003670 ORTHO05D004767 1.4e-50 204.5 153 66.7
Aqoxy1G03000 Aquilegia oxysepala HOM05D003670 ORTHO05D004767 9.2e-50 201.8 114 79.8
Cfa026738 Carpinus fangiana HOM05D003670 ORTHO05D004767 9.9e-44 181.8 284 39.1
MD05G1228600 Malus domestica HOM05D003670 ORTHO05D004767 4.3e-39 166.4 139 61.9
C03p82980 Brassica napus HOM05D003670 ORTHO05D004767 9.9e-36 155.2 94 80.9
BcaC01g00674 Brassica carinata HOM05D003670 ORTHO05D004767 1.7e-35 154.5 92 81.5
BolC1t01654H Brassica oleracea HOM05D003670 ORTHO05D004767 1.7e-35 154.5 131 62.6
C01p17180 Brassica napus HOM05D003670 ORTHO05D004767 1.4e-34 151.4 131 61.8
BcaC04g18607 Brassica carinata HOM05D003670 ORTHO05D004767 1.9e-34 151.0 92 79.3
BolC9t58925H Brassica oleracea HOM05D003670 ORTHO05D004767 7.1e-34 149.1 139 58.3
CAN.G891.1 Capsicum annuum HOM05D003670 ORTHO05D004767 4.6e-33 146.4 94 75.5
Oeu010650.2 Olea europaea HOM05D003670 ORTHO05D004767 2.8e-30 137.1 97 73.2
Lsat_1_v5_gn_4_93521 Lactuca sativa HOM05D003670 ORTHO05D004767 2.9e-27 127.1 66 86.4
Mapoly0032s0014 Marchantia polymorpha HOM05D003670 ORTHO05D031137 1.7e-24 117.9 328 27.4
Cpa.g.sc34.16 Carica papaya HOM05D003670 ORTHO05D004767 5.6e-23 112.8 82 63.4
BcaC06g34801 Brassica carinata HOM05D003670 ORTHO05D004767 1.3e-22 111.7 92 65.2
BolC7t42971H Brassica oleracea HOM05D003670 ORTHO05D004767 2.8e-22 110.5 133 48.9
Oeu034061.1 Olea europaea HOM05D003670 ORTHO05D020012 1.1e-21 108.6 70 68.6
CDE06G0877 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 9.0e-21 105.5 63 69.8
Solyc06g009850.3 Solanum lycopersicum HOM05D003670 ORTHO05D014971 1.2e-20 105.1 121 49.6
BcaC03g15876 Brassica carinata HOM05D003670 ORTHO05D020012 7.1e-18 95.9 60 71.7
BcaC05g28269 Brassica carinata HOM05D003670 ORTHO05D014971 3.9e-16 90.1 51 78.4
AagrBONN_evm.TU.Sc2ySwM_117.2139 Anthoceros agrestis HOM05D003670 ORTHO05D031137 3.3e-15 87.0 244 29.1
Sopen06g004510 Solanum pennellii HOM05D003670 ORTHO05D014971 4.5e-12 76.6 47 76.6
BcaC02g07679 Brassica carinata HOM05D003670 ORTHO05D014971 1.0e-11 75.5 41 80.5
Solyc06g009860.1 Solanum lycopersicum HOM05D003670 ORTHO05D020012 6.5e-11 72.8 45 68.9
C06p40160 Brassica napus HOM05D003670 ORTHO05D020012 1.4e-10 71.6 40 82.5
BolC6t39098H Brassica oleracea HOM05D003670 ORTHO05D020012 1.4e-10 71.6 40 82.5
QL04p088979 Quercus lobata HOM05D003670 ORTHO05D004767 3.0e-08 63.9 68 50.0
Lsat_1_v5_gn_8_160501 Lactuca sativa HOM05D003670 ORTHO05D002209 1.1e-07 62.0 33 87.9


User provided reference genes

Program Settings