Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_578.g16282 Utricularia gibba HOM05D004567 ORTHO05D005726 3.4e-186 654.8 328 100.0
Migut.N03351 Erythranthe guttata HOM05D004567 ORTHO05D005726 4.3e-112 408.7 356 60.1
SGA_v2.0_scaffold24G10556 Striga asiatica HOM05D004567 ORTHO05D005726 1.7e-108 396.7 359 60.4
Oeu037755.1 Olea europaea HOM05D004567 ORTHO05D005726 1.5e-104 383.6 360 57.2
SalBow7G4790 Salvia bowleyana HOM05D004567 ORTHO05D005726 1.5e-104 383.6 357 57.4
Nitab4.5_0000167g0100 Nicotiana tabacum HOM05D004567 ORTHO05D005726 9.6e-104 380.9 361 57.3
Peaxi162Scf01013g00124 Petunia axillaris HOM05D004567 ORTHO05D005726 5.2e-102 375.2 356 56.2
Sopen11g010070 Solanum pennellii HOM05D004567 ORTHO05D005726 2.6e-101 372.9 351 56.7
Cc00_g04630 Coffea canephora HOM05D004567 ORTHO05D005726 6.4e-100 368.2 355 54.6
Hma1.2p1_1513F.1_g288000 Hydrangea macrophylla HOM05D004567 ORTHO05D005726 9.3e-99 364.4 359 56.8
Cfa022165 Carpinus fangiana HOM05D004567 ORTHO05D005726 1.6e-98 363.6 364 55.2
Ciclev10031151m.g Citrus clementina HOM05D004567 ORTHO05D005726 1.6e-98 363.6 359 55.7
GSVIVG01012041001 Vitis vinifera HOM05D004567 ORTHO05D005726 2.7e-98 362.8 359 54.9
TWI74G0160 Tripterygium wilfordii HOM05D004567 ORTHO05D005726 1.3e-97 360.5 362 55.2
Atru.chr10.1157 Acer truncatum HOM05D004567 ORTHO05D005726 5.1e-97 358.6 358 55.9
CAN.G2.11 Capsicum annuum HOM05D004567 ORTHO05D005726 2.5e-96 356.3 365 53.4
FAN03G0634 Fragaria x ananassa HOM05D004567 ORTHO05D005726 5.6e-96 355.1 360 53.6
MD02G1226800 Malus domestica HOM05D004567 ORTHO05D005726 5.6e-96 355.1 356 54.5
Duzib132G0874 Durio zibethinus HOM05D004567 ORTHO05D005726 7.3e-96 354.8 365 54.2
CANSAT25G2547 Cannabis sativa HOM05D004567 ORTHO05D005726 9.6e-96 354.4 362 53.9
Haze_02919 Corylus avellana HOM05D004567 ORTHO05D005726 1.6e-95 353.6 355 55.5
RcHm_v2.0_Chr1g0343571 Rosa chinensis HOM05D004567 ORTHO05D005726 2.1e-95 353.2 360 54.4
Manes.11G065400 Manihot esculenta HOM05D004567 ORTHO05D005726 3.6e-95 352.4 359 54.9
TAR369G0463 Trochodendron aralioides HOM05D004567 ORTHO05D005726 1.4e-94 350.5 359 54.3
FAN10G2749 Fragaria x ananassa HOM05D004567 ORTHO05D005726 1.8e-94 350.1 360 53.3
FAN01G2992 Fragaria x ananassa HOM05D004567 ORTHO05D005726 5.3e-94 348.6 360 53.1
Thecc.02G160600 Theobroma cacao HOM05D004567 ORTHO05D005726 1.2e-93 347.4 365 54.5
FvH4_7g08600 Fragaria vesca HOM05D004567 ORTHO05D005726 1.5e-93 347.1 360 53.1
FAN06G1075 Fragaria x ananassa HOM05D004567 ORTHO05D005726 1.5e-93 347.1 360 53.1
Gorai.012G133500 Gossypium raimondii HOM05D004567 ORTHO05D005726 1.5e-93 347.1 357 53.2
DCAR_011423 Daucus carota HOM05D004567 ORTHO05D005726 2.0e-93 346.7 359 51.8
MD07G1086800 Malus domestica HOM05D004567 ORTHO05D005726 2.0e-93 346.7 357 53.5
Actinidia11176 Actinidia chinensis HOM05D004567 ORTHO05D005726 2.6e-93 346.3 360 54.2
Dinv41785 Davidia involucrata HOM05D004567 ORTHO05D005726 7.6e-93 344.7 332 57.8
Prupe.2G113700 Prunus persica HOM05D004567 ORTHO05D005726 9.9e-93 344.4 355 53.8
Ca_23147_v3 Cicer arietinum L. HOM05D004567 ORTHO05D005726 1.7e-92 343.6 351 53.3
Gohir.D04G147500 Gossypium hirsutum HOM05D004567 ORTHO05D005726 1.7e-92 343.6 357 52.7
Gohir.A04G107700 Gossypium hirsutum HOM05D004567 ORTHO05D005726 3.8e-92 342.4 357 52.7
Psat4g218760 Pisum sativum HOM05D004567 ORTHO05D005726 3.8e-92 342.4 347 53.0
Potri.007G071000 Populus trichocarpa HOM05D004567 ORTHO05D005726 3.8e-92 342.4 360 51.4
Eucgr.J00860 Eucalyptus grandis HOM05D004567 ORTHO05D005726 4.9e-92 342.0 351 52.4
FAN10G3814 Fragaria x ananassa HOM05D004567 ORTHO05D005726 4.9e-92 342.0 360 52.8
Glyma.03G102500 Glycine max HOM05D004567 ORTHO05D005726 8.4e-92 341.3 354 53.7
vmacro12414 Vaccinium macrocarpon HOM05D004567 ORTHO05D005726 8.4e-92 341.3 378 52.4
Medtr8g009530 Medicago truncatula HOM05D004567 ORTHO05D005726 3.2e-91 339.3 350 52.3
Lj7A481G48 Lonicera japonica HOM05D004567 ORTHO05D005726 4.2e-91 339.0 313 60.4
Nn4g22147 Nelumbo nucifera HOM05D004567 ORTHO05D005726 4.2e-91 339.0 353 52.1
VMungo0331G0285 Vigna mungo HOM05D004567 ORTHO05D005726 1.2e-90 337.4 354 54.0
Glyma.07G121300 Glycine max HOM05D004567 ORTHO05D005726 3.5e-90 335.9 354 52.8
Lj3g0010315 Lotus japonicus HOM05D004567 ORTHO05D005726 3.5e-90 335.9 354 52.0
Sabra07G0059700 Salix brachista HOM05D004567 ORTHO05D005726 4.6e-90 335.5 358 51.1
QL04p025799 Quercus lobata HOM05D004567 ORTHO05D005726 6.0e-90 335.1 383 50.4
ECA246G0539 Erigeron canadensis HOM05D004567 ORTHO05D005726 7.9e-90 334.7 351 51.3
Lsat_1_v5_gn_5_37660 Lactuca sativa HOM05D004567 ORTHO05D005726 7.9e-90 334.7 349 51.9
arahy.Tifrunner.gnm1.ann1.JL30IG Arachis hypogaea HOM05D004567 ORTHO05D005726 1.0e-89 334.3 359 52.6
TWI53G0531 Tripterygium wilfordii HOM05D004567 ORTHO05D005726 1.0e-89 334.3 383 49.9
arahy.Tifrunner.gnm1.ann1.2EVD6N Arachis hypogaea HOM05D004567 ORTHO05D005726 1.3e-89 334.0 359 51.8
Gohir.D12G137700 Gossypium hirsutum HOM05D004567 ORTHO05D005726 1.7e-89 333.6 356 51.1
Phvul.010G040700 Phaseolus vulgaris HOM05D004567 ORTHO05D005726 5.1e-89 332.0 350 53.7
Manes.04G103500 Manihot esculenta HOM05D004567 ORTHO05D005726 1.5e-88 330.5 347 52.4
PSO832G3127 Papaver somniferum HOM05D004567 ORTHO05D005726 1.9e-88 330.1 358 51.7
TPR.G17362 Trifolium pratense HOM05D004567 ORTHO05D005726 2.5e-88 329.7 355 52.1
Gorai.008G149200 Gossypium raimondii HOM05D004567 ORTHO05D005726 3.3e-88 329.3 358 50.8
THA.LOC104815215 Tarenaya hassleriana HOM05D004567 ORTHO05D005726 3.3e-88 329.3 363 51.0
MBI01_g01364_MAGBIO Magnolia biondii HOM05D004567 ORTHO05D005726 7.4e-88 328.2 361 50.4
PSO063G1783 Papaver somniferum HOM05D004567 ORTHO05D005726 1.3e-87 327.4 358 51.1
AL1G57750 Arabidopsis lyrata HOM05D004567 ORTHO05D005726 1.8e-86 323.6 361 51.5
PGSC0003DMG401027620 Solanum tuberosum HOM05D004567 ORTHO05D005726 1.8e-86 323.6 307 57.3
Duzib052G0538 Durio zibethinus HOM05D004567 ORTHO05D005726 3.1e-86 322.8 328 55.8
CsaV3_4G009100 Cucumis sativus L. HOM05D004567 ORTHO05D005726 5.3e-86 322.0 361 48.8
PSO339G1936 Papaver somniferum HOM05D004567 ORTHO05D005726 5.3e-86 322.0 328 54.0
Oeu029993.1 Olea europaea HOM05D004567 ORTHO05D005726 6.9e-86 321.6 328 55.8
Thhalv10011376m.g Eutrema salsugineum HOM05D004567 ORTHO05D005726 1.5e-85 320.5 362 50.0
HanXRQChr12g0379741 Helianthus annuus HOM05D004567 ORTHO05D005726 1.5e-85 320.5 331 52.9
Lalb_Chr13g0290871 Lupinus albus HOM05D004567 ORTHO05D005726 2.0e-85 320.1 357 49.9
CSS0021756 Camellia sinensis var. sinensis HOM05D004567 ORTHO05D005726 2.6e-85 319.7 354 49.7
AT1G50120 Arabidopsis thaliana HOM05D004567 ORTHO05D005726 3.4e-85 319.3 363 51.5
Ah.01g012240 Amaranthus hybridus HOM05D004567 ORTHO05D005726 4.5e-85 318.9 344 50.0
Carub.0001s3927 Capsella rubella HOM05D004567 ORTHO05D005726 7.6e-85 318.2 357 51.0
Nitab4.5_0004158g0010 Nicotiana tabacum HOM05D004567 ORTHO05D005726 1.3e-84 317.4 317 56.8
Solyc11g019960.2 Solanum lycopersicum HOM05D004567 ORTHO05D005726 1.3e-84 317.4 313 55.6
Sc11g0003400 Simmondsia chinensis HOM05D004567 ORTHO05D005726 3.8e-84 315.8 344 51.5
Aqoxy7G00425 Aquilegia oxysepala HOM05D004567 ORTHO05D005726 4.9e-84 315.5 362 50.6
CARHR040180 Cardamine hirsuta HOM05D004567 ORTHO05D005726 8.4e-84 314.7 357 51.8
AUR62017692 Chenopodium quinoa HOM05D004567 ORTHO05D005726 1.1e-83 314.3 348 49.7
Sp1g37000 Schrenkiella parvula HOM05D004567 ORTHO05D005726 1.1e-83 314.3 363 50.1
C03p89490 Brassica napus HOM05D004567 ORTHO05D005726 2.4e-83 313.2 359 50.1
Sed0017461 Sechium edule HOM05D004567 ORTHO05D005726 4.2e-83 312.4 371 46.1
A08p03320 Brassica napus HOM05D004567 ORTHO05D005726 2.1e-82 310.1 363 49.6
BolC3t21263H Brassica oleracea HOM05D004567 ORTHO05D005726 2.7e-82 309.7 357 49.9
Hund24369 Selenicereus undatus HOM05D004567 ORTHO05D005726 2.7e-82 309.7 346 49.4
CiPaw.14G015900 Carya illinoinensis HOM05D004567 ORTHO05D005726 4.6e-82 308.9 325 55.1
Rhsim06G0125800 Rhododendron simsii HOM05D004567 ORTHO05D005726 6.0e-82 308.5 350 52.6
BcaB04g17271 Brassica carinata HOM05D004567 ORTHO05D005726 2.3e-81 306.6 354 49.4
Cpa.g.sc0.161 Carica papaya HOM05D004567 ORTHO05D005726 1.1e-80 304.3 331 52.6
BraA06t23544Z Brassica rapa HOM05D004567 ORTHO05D005726 1.5e-80 303.9 360 48.3
C06p05010 Brassica napus HOM05D004567 ORTHO05D005726 5.6e-80 302.0 360 48.6
Aa31LG10G4020 Aethionema arabicum HOM05D004567 ORTHO05D005726 7.4e-80 301.6 386 46.6
BolC6t35627H Brassica oleracea HOM05D004567 ORTHO05D005726 2.8e-79 299.7 360 48.1
EL10Ac9g22943 Beta vulgaris HOM05D004567 ORTHO05D005726 6.2e-79 298.5 358 47.5
BcaC08g43196 Brassica carinata HOM05D004567 ORTHO05D005726 2.4e-78 296.6 360 47.8
BcaB07g33468 Brassica carinata HOM05D004567 ORTHO05D005726 1.2e-77 294.3 359 49.0
unitig_44.g31559 Utricularia gibba HOM05D004567 ORTHO05D005726 4.5e-77 292.4 152 94.7
BraA08t32365Z Brassica rapa HOM05D004567 ORTHO05D005726 3.8e-76 289.3 408 44.1
A06p03360 Brassica napus HOM05D004567 ORTHO05D005726 3.2e-75 286.2 369 46.3
AUR62015228 Chenopodium quinoa HOM05D004567 ORTHO05D005726 1.2e-74 284.3 331 49.2
ATR0605G273 Amborella trichopoda HOM05D004567 ORTHO05D005726 3.5e-74 282.7 376 44.4
Gohir.A12G134100 Gossypium hirsutum HOM05D004567 ORTHO05D005726 6.7e-73 278.5 356 45.5
CDE08G0826 Ceratophyllum demersum HOM05D004567 ORTHO05D005726 1.1e-72 277.7 365 47.1
HPP92_002998 Vanilla planifolia HOM05D004567 ORTHO05D005726 1.5e-72 277.3 358 45.8
A06p03590 Brassica napus HOM05D004567 ORTHO05D005726 1.1e-70 271.2 309 50.2
Os06g0618600 Oryza sativa ssp. japonica HOM05D004567 ORTHO05D005726 1.7e-68 263.8 360 45.0
CDE02G2175 Ceratophyllum demersum HOM05D004567 ORTHO05D005726 8.5e-68 261.5 335 48.4
SEGI_15833 Sequoiadendron giganteum HOM05D004567 ORTHO05D005726 4.5e-53 212.6 319 39.2
Nn3g16289 Nelumbo nucifera HOM05D004567 ORTHO05D005726 3.6e-50 203.0 292 43.2
ClCG10G008360 Citrullus lanatus HOM05D004567 ORTHO05D005726 4.8e-47 192.6 273 41.4
Oeu029992.1 Olea europaea HOM05D004567 ORTHO05D005726 2.0e-45 187.2 138 66.7
SMO367G1304 Selaginella moellendorffii HOM05D004567 ORTHO05D005726 2.1e-42 177.2 348 33.0
Mapoly0026s0045 Marchantia polymorpha HOM05D004567 ORTHO05D005726 4.7e-42 176.0 369 33.3
Duzib248G1520 Durio zibethinus HOM05D004567 ORTHO05D005726 1.4e-41 174.5 124 66.9
AagrBONN_evm.TU.Sc2ySwM_228.3324 Anthoceros agrestis HOM05D004567 ORTHO05D005726 2.6e-40 170.2 179 48.6
BraA06t23566Z Brassica rapa HOM05D004567 ORTHO05D005726 4.4e-40 169.5 146 58.2
Cfa022169 Carpinus fangiana HOM05D004567 ORTHO05D005726 2.8e-39 166.8 175 52.6
Pp3c20_6950 Physcomitrium patens HOM05D004567 ORTHO05D005726 2.9e-36 156.8 370 32.4
C06p05100 Brassica napus HOM05D004567 ORTHO05D005726 5.0e-36 156.0 187 46.0
Pp3c23_19720 Physcomitrium patens HOM05D004567 ORTHO05D005726 2.7e-34 150.2 356 33.1
ClCG10G008380 Citrullus lanatus HOM05D004567 ORTHO05D005726 6.3e-31 139.0 94 67.0
MELO3C018973.2 Cucumis melo HOM05D004567 ORTHO05D005726 9.5e-27 125.2 202 39.1
Zm00001eb066810 Zea mays HOM05D004567 ORTHO05D005726 5.0e-20 102.8 206 37.9
CBR_g8998 Chara braunii HOM05D004567 ORTHO05D005726 2.5e-19 100.5 148 39.9
Rhsim06G0125600 Rhododendron simsii HOM05D004567 ORTHO05D005726 2.1e-18 97.4 75 66.7
Rhsim06G0125500 Rhododendron simsii HOM05D004567 ORTHO05D005726 2.3e-17 94.0 84 58.3
Rhsim06G0125400 Rhododendron simsii HOM05D004567 ORTHO05D005726 5.9e-13 79.3 53 66.0
Nitab4.5_0004158g0020 Nicotiana tabacum HOM05D004567 ORTHO05D005726 7.5e-08 62.4 75 42.7


User provided reference genes

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