Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_578.g16204 Utricularia gibba HOM05D003923 ORTHO05D004553 2.0e-104 382.5 201 100.0
unitig_21.g20601 Utricularia gibba HOM05D003923 ORTHO05D004553 1.3e-18 97.4 174 38.5
Thecc.08G109100 Theobroma cacao HOM05D003923 ORTHO05D004553 4.2e-17 92.4 193 34.7
CSS0001866 Camellia sinensis var. sinensis HOM05D003923 ORTHO05D004553 5.4e-17 92.0 195 37.4
Rhsim06G0083500 Rhododendron simsii HOM05D003923 ORTHO05D004553 7.1e-17 91.7 208 35.1
TWI56G0888 Tripterygium wilfordii HOM05D003923 ORTHO05D004553 9.3e-17 91.3 212 34.4
CSS0021337 Camellia sinensis var. sinensis HOM05D003923 ORTHO05D004553 2.7e-16 89.7 195 35.9
Lalb_Chr08g0241981 Lupinus albus HOM05D003923 ORTHO05D004553 3.5e-16 89.4 226 34.1
Eucgr.F02437 Eucalyptus grandis HOM05D003923 ORTHO05D004553 6.0e-16 88.6 220 33.6
FvH4_5g37730 Fragaria vesca HOM05D003923 ORTHO05D004553 3.9e-15 85.9 208 34.1
FAN08G0462 Fragaria x ananassa HOM05D003923 ORTHO05D004553 3.9e-15 85.9 207 34.3
FAN13G1718 Fragaria x ananassa HOM05D003923 ORTHO05D004553 3.9e-15 85.9 208 34.1
FAN18G1313 Fragaria x ananassa HOM05D003923 ORTHO05D004553 3.9e-15 85.9 208 34.1
TAR628G1119 Trochodendron aralioides HOM05D003923 ORTHO05D004553 3.9e-15 85.9 191 34.0
FAN04G1592 Fragaria x ananassa HOM05D003923 ORTHO05D004553 8.7e-15 84.7 208 34.1
RcHm_v2.0_Chr7g0239471 Rosa chinensis HOM05D003923 ORTHO05D004553 2.5e-14 83.2 231 30.7
Prupe.1G514400 Prunus persica HOM05D003923 ORTHO05D004553 3.3e-14 82.8 206 31.6
TWI12G0076 Tripterygium wilfordii HOM05D003923 ORTHO05D004553 3.3e-14 82.8 211 32.2
unitig_744.g24093 Utricularia gibba HOM05D003923 ORTHO05D004553 3.3e-14 82.8 204 35.3
Cpa.g.sc36.119 Carica papaya HOM05D003923 ORTHO05D004553 4.3e-14 82.4 221 33.9
Oeu061492.1 Olea europaea HOM05D003923 ORTHO05D004553 5.6e-14 82.0 199 31.7
TPR.G35206 Trifolium pratense HOM05D003923 ORTHO05D004553 5.6e-14 82.0 202 35.1
MSTRG.24466 Avicennia marina HOM05D003923 ORTHO05D004553 7.3e-14 81.6 210 33.3
Cc10_g07380 Coffea canephora HOM05D003923 ORTHO05D004553 7.3e-14 81.6 210 30.0
Potri.005G166400 Populus trichocarpa HOM05D003923 ORTHO05D004553 7.3e-14 81.6 190 31.6
Gohir.A05G227800 Gossypium hirsutum HOM05D003923 ORTHO05D004553 9.6e-14 81.3 195 35.4
Gorai.010G042400 Gossypium raimondii HOM05D003923 ORTHO05D004553 1.3e-13 80.9 207 31.9
Duzib041G0577 Durio zibethinus HOM05D003923 ORTHO05D004553 1.6e-13 80.5 185 36.8
Gohir.D05G230200 Gossypium hirsutum HOM05D003923 ORTHO05D004553 1.6e-13 80.5 190 33.2
Gorai.009G238400 Gossypium raimondii HOM05D003923 ORTHO05D004553 1.6e-13 80.5 190 33.2
Nn5g29082 Nelumbo nucifera HOM05D003923 ORTHO05D004553 1.6e-13 80.5 226 32.3
Hma1.2p1_0120F.1_g057290 Hydrangea macrophylla HOM05D003923 ORTHO05D004553 2.8e-13 79.7 185 33.0
Aa31LG4G8160 Aethionema arabicum HOM05D003923 ORTHO05D004553 4.8e-13 79.0 197 34.5
Gohir.D06G037500 Gossypium hirsutum HOM05D003923 ORTHO05D004553 4.8e-13 79.0 207 31.4
QL12p036407 Quercus lobata HOM05D003923 ORTHO05D004553 8.1e-13 78.2 207 32.9
Aqoxy5G01999 Aquilegia oxysepala HOM05D003923 ORTHO05D004553 1.1e-12 77.8 218 29.4
Psat5g138360 Pisum sativum HOM05D003923 ORTHO05D004553 1.1e-12 77.8 219 31.1
Potri.002G094700 Populus trichocarpa HOM05D003923 ORTHO05D004553 1.1e-12 77.8 202 31.7
COL.COLO4_16427 Corchorus olitorius HOM05D003923 ORTHO05D004553 2.4e-12 76.6 191 31.4
Sed0003612 Sechium edule HOM05D003923 ORTHO05D004553 2.4e-12 76.6 199 34.7
Haze_22250 Corylus avellana HOM05D003923 ORTHO05D004553 3.1e-12 76.3 202 30.7
BcaB07g32243 Brassica carinata HOM05D003923 ORTHO05D004553 5.3e-12 75.5 176 34.1
BcaC05g26150 Brassica carinata HOM05D003923 ORTHO05D004553 5.3e-12 75.5 176 34.1
C05p21350 Brassica napus HOM05D003923 ORTHO05D004553 5.3e-12 75.5 176 34.1
BolC5t30833H Brassica oleracea HOM05D003923 ORTHO05D004553 5.3e-12 75.5 176 34.1
CiPaw.08G044000 Carya illinoinensis HOM05D003923 ORTHO05D004553 5.3e-12 75.5 220 30.9
PSO447G0218 Papaver somniferum HOM05D003923 ORTHO05D004553 5.3e-12 75.5 240 30.4
Sp1g19740 Schrenkiella parvula HOM05D003923 ORTHO05D004553 5.3e-12 75.5 208 32.7
AT1G22230 Arabidopsis thaliana HOM05D003923 ORTHO05D004553 6.9e-12 75.1 162 35.8
ECA232G2894 Erigeron canadensis HOM05D003923 ORTHO05D004553 6.9e-12 75.1 226 32.3
Manes.18G068600 Manihot esculenta HOM05D003923 ORTHO05D004553 6.9e-12 75.1 211 30.3
ECA246G1087 Erigeron canadensis HOM05D003923 ORTHO05D004553 9.0e-12 74.7 180 32.8
Lj1g0006284 Lotus japonicus HOM05D003923 ORTHO05D004553 9.0e-12 74.7 204 31.9
PSO210G6507 Papaver somniferum HOM05D003923 ORTHO05D004553 9.0e-12 74.7 217 30.9
Cfa013623 Carpinus fangiana HOM05D003923 ORTHO05D004553 1.2e-11 74.3 201 31.3
CiPaw.07G181200 Carya illinoinensis HOM05D003923 ORTHO05D004553 1.2e-11 74.3 187 32.1
Duzib116G0286 Durio zibethinus HOM05D003923 ORTHO05D004553 1.2e-11 74.3 183 29.5
Oeu024542.1 Olea europaea HOM05D003923 ORTHO05D004553 1.2e-11 74.3 195 31.8
Eucgr.F00301 Eucalyptus grandis HOM05D003923 ORTHO05D004553 2.6e-11 73.2 217 32.7
BraA09t39730Z Brassica rapa HOM05D003923 ORTHO05D004553 3.4e-11 72.8 176 34.7
Lalb_Chr11g0065491 Lupinus albus HOM05D003923 ORTHO05D004553 3.4e-11 72.8 211 32.2
Duzib093G1759 Durio zibethinus HOM05D003923 ORTHO05D004553 4.5e-11 72.4 196 34.7
Lsat_1_v5_gn_9_43840 Lactuca sativa HOM05D003923 ORTHO05D004553 4.5e-11 72.4 175 32.0
MD15G1366500 Malus domestica HOM05D003923 ORTHO05D004553 4.5e-11 72.4 234 28.2
A09p42540 Brassica napus HOM05D003923 ORTHO05D004553 5.8e-11 72.0 178 33.7
Gohir.A06G036700 Gossypium hirsutum HOM05D003923 ORTHO05D004553 7.6e-11 71.6 197 31.5
HanXRQChr15g0491381 Helianthus annuus HOM05D003923 ORTHO05D004553 7.6e-11 71.6 234 30.8
AL1G35680 Arabidopsis lyrata HOM05D003923 ORTHO05D004553 9.9e-11 71.2 162 35.2
Phvul.009G029900 Phaseolus vulgaris HOM05D003923 ORTHO05D004553 9.9e-11 71.2 189 29.1
MD08G1180900 Malus domestica HOM05D003923 ORTHO05D004553 1.3e-10 70.9 213 29.1
Sabra05G0125400 Salix brachista HOM05D003923 ORTHO05D004553 1.3e-10 70.9 197 30.5
BcaC08g47387 Brassica carinata HOM05D003923 ORTHO05D004553 3.8e-10 69.3 213 31.5
C06p52080 Brassica napus HOM05D003923 ORTHO05D004553 3.8e-10 69.3 213 31.5
BolC6t40231H Brassica oleracea HOM05D003923 ORTHO05D004553 3.8e-10 69.3 213 31.5
BcaB05g25102 Brassica carinata HOM05D003923 ORTHO05D004553 4.9e-10 68.9 211 32.7
Lalb_Chr17g0344141 Lupinus albus HOM05D003923 ORTHO05D004553 6.4e-10 68.6 197 29.9
BcaB03g15981 Brassica carinata HOM05D003923 ORTHO05D004553 1.1e-09 67.8 211 31.3
Medtr3g074210 Medicago truncatula HOM05D003923 ORTHO05D004553 1.1e-09 67.8 219 28.3
Peaxi162Scf00041g01015 Petunia axillaris HOM05D003923 ORTHO05D004553 1.1e-09 67.8 237 30.4
CARHR022580 Cardamine hirsuta HOM05D003923 ORTHO05D004553 1.4e-09 67.4 172 33.7
Carub.0001s2178 Capsella rubella HOM05D003923 ORTHO05D004553 1.9e-09 67.0 164 33.5
Peaxi162Scf00160g00147 Petunia axillaris HOM05D003923 ORTHO05D004553 1.9e-09 67.0 185 32.4
BcaB07g32245 Brassica carinata HOM05D003923 ORTHO05D004553 2.4e-09 66.6 172 31.4
AUR62027732 Chenopodium quinoa HOM05D003923 ORTHO05D004553 2.4e-09 66.6 201 30.3
Glyma.06G104700 Glycine max HOM05D003923 ORTHO05D004553 2.4e-09 66.6 187 33.2
Nitab4.5_0002243g0010 Nicotiana tabacum HOM05D003923 ORTHO05D004553 2.4e-09 66.6 206 31.1
CsaV3_4G028650 Cucumis sativus L. HOM05D003923 ORTHO05D004553 3.2e-09 66.2 187 29.4
PGR042G1650 Punica granatum HOM05D003923 ORTHO05D004553 4.2e-09 65.9 198 29.3
THA.LOC104809709 Tarenaya hassleriana HOM05D003923 ORTHO05D004553 5.4e-09 65.5 182 30.8
Ca_15243_v3 Cicer arietinum L. HOM05D003923 ORTHO05D004553 9.3e-09 64.7 201 32.3
MSTRG.22149 Avicennia marina HOM05D003923 ORTHO05D004553 1.2e-08 64.3 166 28.9
Nitab4.5_0000421g0080 Nicotiana tabacum HOM05D003923 ORTHO05D004553 1.2e-08 64.3 199 32.2
Sp5g33250 Schrenkiella parvula HOM05D003923 ORTHO05D004553 1.2e-08 64.3 193 30.1
Lalb_Chr04g0253191 Lupinus albus HOM05D003923 ORTHO05D004553 1.6e-08 63.9 183 29.5
PGSC0003DMG400008539 Solanum tuberosum HOM05D003923 ORTHO05D004553 2.7e-08 63.2 179 34.1
Solyc12g056990.1 Solanum lycopersicum HOM05D003923 ORTHO05D004553 3.5e-08 62.8 182 34.6
Zm00001eb194180 Zea mays HOM05D003923 ORTHO05D004553 3.5e-08 62.8 178 31.5
A02p22020 Brassica napus HOM05D003923 ORTHO05D004553 4.6e-08 62.4 203 31.0
BraA02t07205Z Brassica rapa HOM05D003923 ORTHO05D004553 4.6e-08 62.4 203 31.0
MELO3C010430.2 Cucumis melo HOM05D003923 ORTHO05D004553 6.0e-08 62.0 202 29.7
AL2G38420 Arabidopsis lyrata HOM05D003923 ORTHO05D004553 7.9e-08 61.6 222 28.8
C02p35410 Brassica napus HOM05D003923 ORTHO05D004553 7.9e-08 61.6 201 30.8
BolC2t09553H Brassica oleracea HOM05D003923 ORTHO05D004553 7.9e-08 61.6 201 30.8
BraA07t31856Z Brassica rapa HOM05D003923 ORTHO05D004553 7.9e-08 61.6 190 30.0
EL10Ac1g01249 Beta vulgaris HOM05D003923 ORTHO05D004553 1.0e-07 61.2 239 27.2
MBI02_g08739_MAGBIO Magnolia biondii HOM05D003923 ORTHO05D004553 1.0e-07 61.2 181 30.4
AT1G78110 Arabidopsis thaliana HOM05D003923 ORTHO05D004553 1.3e-07 60.8 196 29.6
BcaC06g34942 Brassica carinata HOM05D003923 ORTHO05D004553 1.3e-07 60.8 193 30.6
Dinv13027 Davidia involucrata HOM05D003923 ORTHO05D004553 1.3e-07 60.8 108 41.7
A07p43360 Brassica napus HOM05D003923 ORTHO05D004553 1.8e-07 60.5 190 30.0
Sed0022190 Sechium edule HOM05D003923 ORTHO05D004553 2.3e-07 60.1 173 31.8
BcaC03g15795 Brassica carinata HOM05D003923 ORTHO05D004553 3.0e-07 59.7 202 31.2
Carub.0002s2500 Capsella rubella HOM05D003923 ORTHO05D004553 3.0e-07 59.7 202 29.2
Aqoxy6G00599 Aquilegia oxysepala HOM05D003923 ORTHO05D004553 3.9e-07 59.3 197 29.4
Ciclev10001646m.g Citrus clementina HOM05D003923 ORTHO05D004553 3.9e-07 59.3 212 31.1
Sopen00g003260 Solanum pennellii HOM05D003923 ORTHO05D004553 3.9e-07 59.3 183 34.4
Zm00001eb255200 Zea mays HOM05D003923 ORTHO05D004553 3.9e-07 59.3 198 30.8
CARHR071570 Cardamine hirsuta HOM05D003923 ORTHO05D004553 6.7e-07 58.5 223 28.7
CsaV3_2G024220 Cucumis sativus L. HOM05D003923 ORTHO05D004553 6.7e-07 58.5 168 28.6
vmacro21241 Vaccinium macrocarpon HOM05D003923 ORTHO05D004553 6.7e-07 58.5 196 31.6
A07p14630 Brassica napus HOM05D003923 ORTHO05D004553 1.1e-06 57.8 193 31.1
ClCG11G015440 Citrullus lanatus HOM05D003923 ORTHO05D004553 1.1e-06 57.8 234 29.1
BcaC08g45438 Brassica carinata HOM05D003923 ORTHO05D004553 1.5e-06 57.4 190 29.5
C06p30680 Brassica napus HOM05D003923 ORTHO05D004553 1.5e-06 57.4 190 29.5
BolC6t38232H Brassica oleracea HOM05D003923 ORTHO05D004553 1.5e-06 57.4 190 29.5
Sabra02G0074700 Salix brachista HOM05D003923 ORTHO05D004553 1.9e-06 57.0 151 29.1
Thhalv10018798m.g Eutrema salsugineum HOM05D003923 ORTHO05D004553 2.5e-06 56.6 199 28.1
BcaB02g07147 Brassica carinata HOM05D003923 ORTHO05D004553 3.3e-06 56.2 217 28.6
A07p27700 Brassica napus HOM05D003923 ORTHO05D004553 3.3e-06 56.2 191 29.3
ClCG08G011040 Citrullus lanatus HOM05D003923 ORTHO05D004553 3.3e-06 56.2 195 28.7
BraA07t30411Z Brassica rapa HOM05D003923 ORTHO05D004553 4.3e-06 55.8 218 28.4
Actinidia30763 Actinidia chinensis HOM05D003923 ORTHO05D004553 7.4e-06 55.1 115 34.8
Aa31LG7G6170 Aethionema arabicum HOM05D003923 ORTHO05D004553 7.4e-06 55.1 206 29.6
MELO3C011359.2 Cucumis melo HOM05D003923 ORTHO05D004553 7.4e-06 55.1 168 28.0
Thhalv10008264m.g Eutrema salsugineum HOM05D003923 ORTHO05D004553 9.6e-06 54.7 169 29.0
Sc23g0000110 Simmondsia chinensis HOM05D003923 ORTHO05D004553 9.6e-06 54.7 243 25.9


User provided reference genes

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