Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_578.g16186 Utricularia gibba HOM05D003707 ORTHO05D004309 7.3e-179 630.6 344 100.0
unitig_8.g4846 Utricularia gibba HOM05D003707 ORTHO05D004309 3.7e-106 389.0 290 77.6
Migut.N02874 Erythranthe guttata HOM05D003707 ORTHO05D004309 4.4e-99 365.5 344 60.2
MSTRG.22171 Avicennia marina HOM05D003707 ORTHO05D004309 3.6e-93 345.9 337 59.3
SGA_v2.0_scaffold4G02188 Striga asiatica HOM05D003707 ORTHO05D004309 1.1e-86 324.3 344 58.4
SalBow2G0015 Salvia bowleyana HOM05D003707 ORTHO05D004309 3.2e-86 322.8 345 55.4
SalBow2G2952 Salvia bowleyana HOM05D003707 ORTHO05D004309 3.2e-86 322.8 345 55.4
Sopen04g029730 Solanum pennellii HOM05D003707 ORTHO05D004309 4.0e-84 315.8 338 54.1
CAN.G1173.6 Capsicum annuum HOM05D003707 ORTHO05D004309 1.3e-82 310.8 341 52.8
Solyc04g074760.3 Solanum lycopersicum HOM05D003707 ORTHO05D004309 2.8e-82 309.7 338 53.6
Oeu024817.1 Olea europaea HOM05D003707 ORTHO05D004309 1.4e-81 307.4 350 52.9
Nitab4.5_0003374g0030 Nicotiana tabacum HOM05D003707 ORTHO05D004309 1.8e-81 307.0 338 53.3
Hma1.2p1_1180F.1_g264680 Hydrangea macrophylla HOM05D003707 ORTHO05D004309 1.3e-79 300.8 350 51.4
Lj4C96G4 Lonicera japonica HOM05D003707 ORTHO05D004309 1.5e-78 297.4 348 51.4
Nitab4.5_0009374g0030 Nicotiana tabacum HOM05D003707 ORTHO05D004309 3.2e-78 296.2 338 53.3
Duzib093G2197 Durio zibethinus HOM05D003707 ORTHO05D004309 1.4e-76 290.8 346 50.6
Gohir.A06G032900 Gossypium hirsutum HOM05D003707 ORTHO05D004309 4.9e-74 282.3 340 49.4
Hma1.2p1_1568F.1_g291110 Hydrangea macrophylla HOM05D003707 ORTHO05D004309 1.1e-73 281.2 340 50.0
Rhsim06G0077200 Rhododendron simsii HOM05D003707 ORTHO05D004309 1.4e-73 280.8 385 47.0
PGSC0003DMG400030841 Solanum tuberosum HOM05D003707 ORTHO05D004309 3.1e-73 279.6 341 49.0
MSTRG.24439 Avicennia marina HOM05D003707 ORTHO05D004309 1.2e-72 277.7 283 57.2
Cc00_g22270 Coffea canephora HOM05D003707 ORTHO05D004309 2.0e-72 276.9 348 50.3
Cfa017898 Carpinus fangiana HOM05D003707 ORTHO05D004309 1.0e-71 274.6 338 48.8
CSS0029872 Camellia sinensis var. sinensis HOM05D003707 ORTHO05D004309 1.7e-71 273.9 348 47.4
Duzib041G0396 Durio zibethinus HOM05D003707 ORTHO05D004309 8.6e-71 271.6 346 48.8
Actinidia29599 Actinidia chinensis HOM05D003707 ORTHO05D004309 3.3e-70 269.6 346 50.9
TWI56G1284 Tripterygium wilfordii HOM05D003707 ORTHO05D004309 9.5e-70 268.1 346 47.7
Gohir.A05G223200 Gossypium hirsutum HOM05D003707 ORTHO05D004309 1.2e-69 267.7 339 48.7
ECA246G0538 Erigeron canadensis HOM05D003707 ORTHO05D004309 8.0e-69 265.0 339 47.8
Gorai.009G233400 Gossypium raimondii HOM05D003707 ORTHO05D004309 1.4e-68 264.2 339 48.1
Gohir.D05G225900 Gossypium hirsutum HOM05D003707 ORTHO05D004309 3.0e-68 263.1 339 48.1
QL02p002269 Quercus lobata HOM05D003707 ORTHO05D004309 6.8e-68 261.9 346 48.0
Thecc.08G101000 Theobroma cacao HOM05D003707 ORTHO05D004309 1.5e-67 260.8 348 46.3
vmacro11166 Vaccinium macrocarpon HOM05D003707 ORTHO05D004309 1.5e-67 260.8 348 49.1
GSVIVG01009092001 Vitis vinifera HOM05D003707 ORTHO05D004309 1.5e-67 260.8 349 47.9
Ciclev10001810m.g Citrus clementina HOM05D003707 ORTHO05D004309 2.0e-67 260.4 348 51.1
Haze_18252 Corylus avellana HOM05D003707 ORTHO05D004309 3.4e-67 259.6 338 47.9
HanXRQChr05g0163201 Helianthus annuus HOM05D003707 ORTHO05D004309 3.4e-67 259.6 347 46.1
Gorai.010G037300 Gossypium raimondii HOM05D003707 ORTHO05D004309 4.4e-67 259.2 346 46.8
Gohir.D06G033800 Gossypium hirsutum HOM05D003707 ORTHO05D004309 1.7e-66 257.3 346 46.5
Lsat_1_v5_gn_6_105560 Lactuca sativa HOM05D003707 ORTHO05D004309 2.9e-66 256.5 348 46.3
CiPaw.16G032500 Carya illinoinensis HOM05D003707 ORTHO05D004309 5.4e-65 252.3 347 47.8
Glyma.02G209600 Glycine max HOM05D003707 ORTHO05D004309 7.0e-65 251.9 333 46.2
CiPaw.15G045200 Carya illinoinensis HOM05D003707 ORTHO05D004309 2.7e-64 250.0 342 46.5
PSO063G2842 Papaver somniferum HOM05D003707 ORTHO05D004309 1.0e-63 248.1 384 44.8
Glyma.14G177700 Glycine max HOM05D003707 ORTHO05D004309 5.0e-63 245.7 335 45.4
Hund16884 Selenicereus undatus HOM05D003707 ORTHO05D004309 5.0e-63 245.7 348 46.6
PSO782G1937 Papaver somniferum HOM05D003707 ORTHO05D004309 6.6e-63 245.4 385 42.9
Peaxi162Scf00139g00014 Petunia axillaris HOM05D003707 ORTHO05D004309 6.6e-63 245.4 352 48.9
EL10Ac1g01138 Beta vulgaris HOM05D003707 ORTHO05D004309 8.6e-63 245.0 340 43.5
Prupe.1G524200 Prunus persica HOM05D003707 ORTHO05D004309 8.6e-63 245.0 348 45.4
Cpa.g.sc36.188 Carica papaya HOM05D003707 ORTHO05D004309 1.1e-62 244.6 346 46.5
TWI12G0071 Tripterygium wilfordii HOM05D003707 ORTHO05D004309 1.9e-62 243.8 348 45.4
HanXRQChr10g0278171 Helianthus annuus HOM05D003707 ORTHO05D004309 2.5e-62 243.4 347 47.8
Actinidia10349 Actinidia chinensis HOM05D003707 ORTHO05D004309 3.3e-62 243.0 345 48.4
MD08G1190000 Malus domestica HOM05D003707 ORTHO05D004309 4.3e-62 242.7 339 44.8
arahy.Tifrunner.gnm1.ann1.K5H584 Arachis hypogaea HOM05D003707 ORTHO05D004309 3.6e-61 239.6 348 47.4
MD15G1377500 Malus domestica HOM05D003707 ORTHO05D004309 3.6e-61 239.6 339 44.5
FvH4_5g36300 Fragaria vesca HOM05D003707 ORTHO05D004309 4.7e-61 239.2 349 43.8
arahy.Tifrunner.gnm1.ann1.NXYL2L Arachis hypogaea HOM05D003707 ORTHO05D004309 8.0e-61 238.4 348 47.1
Atru.chr13.1112 Acer truncatum HOM05D003707 ORTHO05D004309 1.0e-60 238.0 349 47.6
Glyma.06G100100 Glycine max HOM05D003707 ORTHO05D004309 1.8e-60 237.3 348 42.8
Ca_16005_v3 Cicer arietinum L. HOM05D003707 ORTHO05D004309 6.8e-60 235.3 342 48.2
RcHm_v2.0_Chr7g0238321 Rosa chinensis HOM05D003707 ORTHO05D004309 1.2e-59 234.6 353 43.9
Eucgr.F00380 Eucalyptus grandis HOM05D003707 ORTHO05D004309 2.2e-58 230.3 348 44.3
FAN04G1986 Fragaria x ananassa HOM05D003707 ORTHO05D004309 2.9e-58 229.9 349 43.0
Dinv07080 Davidia involucrata HOM05D003707 ORTHO05D004309 1.1e-57 228.0 355 46.2
THA.LOC104816564 Tarenaya hassleriana HOM05D003707 ORTHO05D004309 1.4e-57 227.6 353 42.5
CSS0014867 Camellia sinensis var. sinensis HOM05D003707 ORTHO05D004309 5.4e-57 225.7 351 45.9
Manes.18G063100 Manihot esculenta HOM05D003707 ORTHO05D004309 5.4e-57 225.7 348 43.1
Lj1g0011682 Lotus japonicus HOM05D003707 ORTHO05D004309 7.0e-57 225.3 348 45.1
CSS0001361 Camellia sinensis var. sinensis HOM05D003707 ORTHO05D004309 9.2e-57 224.9 351 45.9
Phvul.008G177200 Phaseolus vulgaris HOM05D003707 ORTHO05D004309 1.0e-55 221.5 335 48.1
Sed0001081 Sechium edule HOM05D003707 ORTHO05D004309 8.6e-55 218.4 339 43.4
VMungo0647G1227 Vigna mungo HOM05D003707 ORTHO05D004309 1.5e-54 217.6 348 46.3
Psat2g069400 Pisum sativum HOM05D003707 ORTHO05D004309 1.9e-54 217.2 339 42.8
Potri.002G101400 Populus trichocarpa HOM05D003707 ORTHO05D004309 3.3e-54 216.5 355 41.4
FAN13G1833 Fragaria x ananassa HOM05D003707 ORTHO05D004309 9.5e-54 214.9 292 44.9
Lalb_Chr11g0065241 Lupinus albus HOM05D003707 ORTHO05D004309 1.6e-53 214.2 321 45.2
CsaV3_3G047770 Cucumis sativus L. HOM05D003707 ORTHO05D004309 2.1e-53 213.8 348 42.2
PGR031G2053 Punica granatum HOM05D003707 ORTHO05D004309 2.1e-53 213.8 348 42.8
FAN18G3842 Fragaria x ananassa HOM05D003707 ORTHO05D004309 2.8e-53 213.4 315 42.5
DCAR_005285 Daucus carota HOM05D003707 ORTHO05D004309 1.4e-52 211.1 353 41.6
Lalb_Chr04g0253021 Lupinus albus HOM05D003707 ORTHO05D004309 3.1e-52 209.9 339 46.3
TPR.G12497 Trifolium pratense HOM05D003707 ORTHO05D004309 5.2e-52 209.1 371 41.0
ECA247G2086 Erigeron canadensis HOM05D003707 ORTHO05D004309 1.2e-51 208.0 340 42.1
VMungo1309G1468 Vigna mungo HOM05D003707 ORTHO05D004309 3.7e-50 203.0 349 40.1
Nn4g24800 Nelumbo nucifera HOM05D003707 ORTHO05D004309 3.2e-49 199.9 390 42.1
PGR031G0663 Punica granatum HOM05D003707 ORTHO05D004309 3.2e-49 199.9 341 44.9
Sabra02G0079500 Salix brachista HOM05D003707 ORTHO05D004309 7.1e-49 198.7 397 37.0
MELO3C003545.2 Cucumis melo HOM05D003707 ORTHO05D004309 2.1e-48 197.2 348 40.2
CARHR260110 Cardamine hirsuta HOM05D003707 ORTHO05D004309 6.0e-48 195.7 344 37.8
AL6G41440 Arabidopsis lyrata HOM05D003707 ORTHO05D004309 6.6e-47 192.2 340 40.6
Phvul.009G033700 Phaseolus vulgaris HOM05D003707 ORTHO05D004309 6.6e-47 192.2 335 39.1
Sed0003858 Sechium edule HOM05D003707 ORTHO05D004309 8.6e-47 191.8 348 39.4
Aa31LG9G14730 Aethionema arabicum HOM05D003707 ORTHO05D004309 7.3e-46 188.7 340 37.6
Glyma.04G098500 Glycine max HOM05D003707 ORTHO05D004309 1.2e-45 188.0 299 39.1
Thhalv10028816m.g Eutrema salsugineum HOM05D003707 ORTHO05D004309 4.7e-45 186.0 300 39.7
BraA03t12047Z Brassica rapa HOM05D003707 ORTHO05D004309 8.1e-45 185.3 367 38.7
TPR.G6353 Trifolium pratense HOM05D003707 ORTHO05D004309 6.8e-44 182.2 289 42.6
AT4G09060 Arabidopsis thaliana HOM05D003707 ORTHO05D004309 2.6e-43 180.3 339 39.8
BcaB01g02805 Brassica carinata HOM05D003707 ORTHO05D004309 5.8e-43 179.1 351 37.3
Thhalv10008342m.g Eutrema salsugineum HOM05D003707 ORTHO05D004309 2.2e-42 177.2 315 40.0
BcaB02g06540 Brassica carinata HOM05D003707 ORTHO05D004309 2.9e-42 176.8 313 37.1
Oeu029729.1 Olea europaea HOM05D003707 ORTHO05D004309 4.9e-42 176.0 152 62.5
Sp1g13060 Schrenkiella parvula HOM05D003707 ORTHO05D004309 3.2e-41 173.3 315 37.5
ClCG11G014370 Citrullus lanatus HOM05D003707 ORTHO05D004309 2.1e-40 170.6 349 39.0
Medtr3g099600 Medicago truncatula HOM05D003707 ORTHO05D004309 2.1e-40 170.6 345 36.8
AUR62027820 Chenopodium quinoa HOM05D003707 ORTHO05D004309 2.7e-40 170.2 271 45.8
Sp6g08460 Schrenkiella parvula HOM05D003707 ORTHO05D004309 2.7e-40 170.2 335 35.8
Carub.0006s2764 Capsella rubella HOM05D003707 ORTHO05D004309 4.6e-40 169.5 347 38.3
Carub.0001s1444 Capsella rubella HOM05D003707 ORTHO05D004309 7.8e-40 168.7 321 35.5
Hund26994 Selenicereus undatus HOM05D003707 ORTHO05D004309 1.0e-39 168.3 304 36.8
Ca_16033_v3 Cicer arietinum L. HOM05D003707 ORTHO05D004309 1.7e-39 167.5 363 36.4
AUR62018979 Chenopodium quinoa HOM05D003707 ORTHO05D004309 1.1e-38 164.9 271 44.6
CARHR015180 Cardamine hirsuta HOM05D003707 ORTHO05D004309 1.5e-38 164.5 324 38.9
C03p34360 Brassica napus HOM05D003707 ORTHO05D004309 1.9e-38 164.1 346 38.7
Psat5g050280 Pisum sativum HOM05D003707 ORTHO05D004309 3.3e-38 163.3 334 36.5
BraA06t24253Z Brassica rapa HOM05D003707 ORTHO05D004309 1.2e-37 161.4 310 35.5
C05p12640 Brassica napus HOM05D003707 ORTHO05D004309 1.6e-37 161.0 302 35.8
AL1G26650 Arabidopsis lyrata HOM05D003707 ORTHO05D004309 2.1e-37 160.6 321 37.4
BolC3t15746H Brassica oleracea HOM05D003707 ORTHO05D004309 3.6e-37 159.8 361 37.7
A03p28420 Brassica napus HOM05D003707 ORTHO05D004309 4.7e-37 159.5 341 36.7
BcaC01g04732 Brassica carinata HOM05D003707 ORTHO05D004309 8.1e-37 158.7 346 37.9
A06p10740 Brassica napus HOM05D003707 ORTHO05D004309 2.4e-36 157.1 310 35.2
AT1G14680 Arabidopsis thaliana HOM05D003707 ORTHO05D004309 7.6e-35 152.1 322 33.5
Oeu029730.1 Olea europaea HOM05D003707 ORTHO05D004309 1.9e-33 147.5 174 47.1
A09p29580 Brassica napus HOM05D003707 ORTHO05D004309 2.4e-33 147.1 342 33.0
BraA09t38526Z Brassica rapa HOM05D003707 ORTHO05D004309 2.4e-33 147.1 342 33.0
RcHm_v2.0_Chr3g0481851 Rosa chinensis HOM05D003707 ORTHO05D004309 9.3e-33 145.2 146 56.8
Aqoxy3G04171 Aquilegia oxysepala HOM05D003707 ORTHO05D004309 1.2e-32 144.8 395 34.4
BcaC05g25387 Brassica carinata HOM05D003707 ORTHO05D004309 4.6e-32 142.9 310 34.2
COL.COLO4_11998 Corchorus olitorius HOM05D003707 ORTHO05D004309 6.6e-31 139.0 348 33.3
MD08G1189700 Malus domestica HOM05D003707 ORTHO05D004309 6.6e-31 139.0 211 41.7
MBI06_g34539_MAGBIO Magnolia biondii HOM05D003707 ORTHO05D004309 2.8e-29 133.7 279 36.9
Duzib114G0708 Durio zibethinus HOM05D003707 ORTHO05D004309 3.1e-28 130.2 166 48.2
ATR0618G286 Amborella trichopoda HOM05D003707 ORTHO05D004309 5.3e-28 129.4 312 34.9
HanXRQChr17g0556331 Helianthus annuus HOM05D003707 ORTHO05D004309 5.3e-28 129.4 226 38.5
MBI03_g38469_MAGBIO Magnolia biondii HOM05D003707 ORTHO05D004309 5.3e-28 129.4 331 32.9
CANSAT25G0959 Cannabis sativa HOM05D003707 ORTHO05D004309 2.6e-27 127.1 323 33.7
Aqoxy5G03114 Aquilegia oxysepala HOM05D003707 ORTHO05D004309 1.7e-26 124.4 139 51.8
MBI06_g46882_MAGBIO Magnolia biondii HOM05D003707 ORTHO05D004309 1.9e-25 120.9 148 52.0
MBI06_g47948_MAGBIO Magnolia biondii HOM05D003707 ORTHO05D004309 2.4e-25 120.6 148 52.0
RcHm_v2.0_Chr5g0049351 Rosa chinensis HOM05D003707 ORTHO05D004309 4.2e-25 119.8 151 51.0
BcaB01g01380 Brassica carinata HOM05D003707 ORTHO05D004309 7.1e-25 119.0 345 32.8
MBI03_g47917_MAGBIO Magnolia biondii HOM05D003707 ORTHO05D004309 7.1e-25 119.0 374 32.6
Hma1.2p1_0526F.1_g172810 Hydrangea macrophylla HOM05D003707 ORTHO05D004309 5.1e-23 112.8 177 41.2
CDE02G0255 Ceratophyllum demersum HOM05D003707 ORTHO05D004309 6.6e-23 112.5 150 41.3
ClCG08G011330 Citrullus lanatus HOM05D003707 ORTHO05D004309 6.6e-23 112.5 302 34.4
BolC5t30008H Brassica oleracea HOM05D000624 ORTHO05D000495 9.6e-22 108.6 240 34.6
HPP92_025845 Vanilla planifolia HOM05D003707 ORTHO05D004309 2.1e-21 107.5 341 31.1
Cpa.g.sc36.189 Carica papaya HOM05D003707 ORTHO05D004309 2.4e-20 104.0 248 35.5
RcHm_v2.0_Chr7g0238301 Rosa chinensis HOM05D003707 ORTHO05D004309 9.0e-20 102.1 129 46.5
Sc23g0000420 Simmondsia chinensis HOM05D003707 ORTHO05D004309 9.0e-20 102.1 275 34.9
Actinidia33120 Actinidia chinensis HOM05D003707 ORTHO05D004309 2.0e-19 100.9 216 37.0
MD08G1190200 Malus domestica HOM05D003707 ORTHO05D004309 1.1e-17 95.1 224 32.1
RcHm_v2.0_Chr3g0481861 Rosa chinensis HOM05D003707 ORTHO05D004309 1.0e-15 88.6 134 42.5
CDE05G1426 Ceratophyllum demersum HOM05D003707 ORTHO05D004309 3.9e-15 86.7 205 30.2
RcHm_v2.0_Chr5g0045611 Rosa chinensis HOM05D003707 ORTHO05D004309 8.7e-15 85.5 135 42.2
RcHm_v2.0_Chr5g0045621 Rosa chinensis HOM05D003707 ORTHO05D004309 8.7e-15 85.5 207 36.2
BcaC07g41551 Brassica carinata HOM05D003707 ORTHO05D032288 1.9e-14 84.3 280 27.9
Duzib116G0740 Durio zibethinus HOM05D003707 ORTHO05D004309 1.9e-14 84.3 112 42.9
EL10Ac4g09478 Beta vulgaris HOM05D029458 ORTHO05D004309 3.7e-13 80.1 79 54.4
C08p45530 Brassica napus HOM05D000624 ORTHO05D000495 4.5e-11 73.2 138 34.8
BolC8t52105H Brassica oleracea HOM05D000624 ORTHO05D000495 4.5e-11 73.2 138 34.8
Haze_21792 Corylus avellana HOM05D003707 ORTHO05D004309 5.8e-11 72.8 84 52.4
Medtr5g064800 Medicago truncatula HOM05D009584 ORTHO05D011650 6.5e-10 69.3 303 28.4
RcHm_v2.0_Chr5g0040961 Rosa chinensis HOM05D003707 ORTHO05D004309 7.1e-09 65.9 78 46.2
Os02g0831400 Oryza sativa ssp. japonica HOM05D003707 ORTHO05D004309 9.3e-09 65.5 180 31.1
Hma1.2p1_0526F.1_g172800 Hydrangea macrophylla HOM05D003707 ORTHO05D004309 4.6e-08 63.2 46 69.6
C09p37650 Brassica napus HOM05D003707 ORTHO05D004309 1.9e-06 57.8 225 28.0
BolC9t56595H Brassica oleracea HOM05D003707 ORTHO05D004309 1.9e-06 57.8 225 28.0
RcHm_v2.0_Chr5g0044811 Rosa chinensis HOM05D003707 ORTHO05D004309 2.5e-06 57.4 60 51.7
BcaB02g06537 Brassica carinata HOM05D003707 ORTHO05D004309 3.3e-06 57.0 45 62.2
Zm00001eb259540 Zea mays HOM05D003707 ORTHO05D004309 3.3e-06 57.0 347 24.8


User provided reference genes

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