Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_578.g16152 Utricularia gibba HOM05D002412 ORTHO05D002516 1.5e-53 212.6 109 100.0
unitig_8.g4872 Utricularia gibba HOM05D002412 ORTHO05D002516 3.2e-32 141.7 106 76.4
unitig_21.g20629 Utricularia gibba HOM05D002412 ORTHO05D002516 3.5e-18 95.1 118 51.7
MSTRG.22217 Avicennia marina HOM05D002412 ORTHO05D002516 3.8e-17 91.7 122 47.5
unitig_744.g24125 Utricularia gibba HOM05D002412 ORTHO05D002516 5.0e-17 91.3 119 52.9
unitig_0.g1046 Utricularia gibba HOM05D002412 ORTHO05D002516 9.5e-16 87.0 119 49.6
MSTRG.1024 Avicennia marina HOM05D002412 ORTHO05D002516 4.7e-15 84.7 120 50.0
Oeu020549.2 Olea europaea HOM05D002412 ORTHO05D002516 3.0e-14 82.0 111 48.6
Oeu048571.1 Olea europaea HOM05D002412 ORTHO05D002516 8.9e-14 80.5 107 50.5
MSTRG.24380 Avicennia marina HOM05D002412 ORTHO05D002516 1.5e-13 79.7 122 45.9
Oeu053627.1 Olea europaea HOM05D002412 ORTHO05D002516 7.5e-13 77.4 118 47.5
Cc00_g17020 Coffea canephora HOM05D002412 ORTHO05D002516 4.1e-11 71.6 125 45.6
Oeu036975.1 Olea europaea HOM05D002412 ORTHO05D002516 7.0e-11 70.9 107 47.7
Oeu037507.3 Olea europaea HOM05D006761 ORTHO05D002516 4.6e-10 68.2 108 46.3
Dinv44944 Davidia involucrata HOM05D002412 ORTHO05D002516 3.0e-09 65.5 112 44.6
Sabra02G0092100 Salix brachista HOM05D002412 ORTHO05D002516 8.6e-09 63.9 104 48.1
unitig_21.g20307 Utricularia gibba HOM05D002412 ORTHO05D002516 1.5e-08 63.2 106 42.5
Haze_22419 Corylus avellana HOM05D002412 ORTHO05D002516 2.5e-08 62.4 127 37.8
Rhsim06G0063100 Rhododendron simsii HOM05D002412 ORTHO05D002516 4.3e-08 61.6 112 43.8
Nitab4.5_0000497g0080 Nicotiana tabacum HOM05D002412 ORTHO05D002516 7.3e-08 60.8 120 40.8
Actinidia04390 Actinidia chinensis HOM05D002412 ORTHO05D002516 9.5e-08 60.5 113 41.6
Cc10_g05040 Coffea canephora HOM05D002412 ORTHO05D002516 9.5e-08 60.5 121 38.8
Migut.C00481 Erythranthe guttata HOM05D062627 ORTHO05D002516 9.5e-08 60.5 126 41.3
Glyma.14G089039 Glycine max HOM05D002412 ORTHO05D002516 9.5e-08 60.5 122 38.5
Nitab4.5_0003725g0030 Nicotiana tabacum HOM05D002412 ORTHO05D002516 9.5e-08 60.5 119 43.7
Potri.002G117600 Populus trichocarpa HOM05D002412 ORTHO05D002516 2.1e-07 59.3 105 46.7
Lj9A332T16 Lonicera japonica HOM05D002412 ORTHO05D002516 3.6e-07 58.5 126 41.3
Solyc12g088300.2 Solanum lycopersicum HOM05D002412 ORTHO05D002516 4.7e-07 58.2 119 40.3
PGSC0003DMG401011556 Solanum tuberosum HOM05D002412 ORTHO05D002516 4.7e-07 58.2 116 38.8
Manes.18G047500 Manihot esculenta HOM05D002412 ORTHO05D002516 6.2e-07 57.8 106 46.2
Sopen01g049190 Solanum pennellii HOM05D002412 ORTHO05D002516 8.0e-07 57.4 117 40.2
MD08G1080400 Malus domestica HOM05D002412 ORTHO05D002516 1.1e-06 57.0 120 40.0
Potri.014G015000 Populus trichocarpa HOM05D002412 ORTHO05D002516 1.1e-06 57.0 105 44.8
unitig_46.g17922 Utricularia gibba HOM05D001230 ORTHO05D001067 1.1e-06 57.0 106 41.5
CSS0002290 Camellia sinensis var. sinensis HOM05D002412 ORTHO05D002516 1.4e-06 56.6 124 38.7
Gorai.009G220800 Gossypium raimondii HOM05D002412 ORTHO05D002516 1.4e-06 56.6 128 39.1
Lj5g0023078 Lotus japonicus HOM05D002412 ORTHO05D002516 1.4e-06 56.6 120 40.0
CsaV3_2G026020 Cucumis sativus L. HOM05D002412 ORTHO05D002516 1.8e-06 56.2 109 37.6
TPR.G8322 Trifolium pratense HOM05D002412 ORTHO05D002516 1.8e-06 56.2 107 43.9
Sopen12g030300 Solanum pennellii HOM05D002412 ORTHO05D002516 2.3e-06 55.8 117 39.3
VMungo0647G1017 Vigna mungo HOM05D002412 ORTHO05D002516 2.3e-06 55.8 119 37.8
CAN.G975.16 Capsicum annuum HOM05D002412 ORTHO05D002516 3.1e-06 55.5 57 50.9
Duzib093G1945 Durio zibethinus HOM05D002412 ORTHO05D002516 3.1e-06 55.5 128 38.3
FAN20G2155 Fragaria x ananassa HOM05D002412 ORTHO05D002516 3.1e-06 55.5 125 40.8
Lj9A329T24 Lonicera japonica HOM05D002412 ORTHO05D002516 3.1e-06 55.5 126 40.5
Nitab4.5_0003953g0040 Nicotiana tabacum HOM05D002412 ORTHO05D002516 3.1e-06 55.5 112 40.2
vmacro01953 Vaccinium macrocarpon HOM05D002412 ORTHO05D002516 3.1e-06 55.5 124 37.9
ClCG08G016590 Citrullus lanatus HOM05D002412 ORTHO05D002516 4.0e-06 55.1 109 37.6
Glyma.11G002100 Glycine max HOM05D002412 ORTHO05D002516 4.0e-06 55.1 116 35.3
Gohir.D05G214100 Gossypium hirsutum HOM05D002412 ORTHO05D002516 4.0e-06 55.1 126 38.9
Hma1.2p1_1059F.1_g253110 Hydrangea macrophylla HOM05D002412 ORTHO05D002516 4.0e-06 55.1 128 39.8
Nn6g34504 Nelumbo nucifera HOM05D002412 ORTHO05D002516 4.0e-06 55.1 128 37.5
Ciclev10029343m.g Citrus clementina HOM05D002412 ORTHO05D002516 5.2e-06 54.7 126 36.5
PGSC0003DMG400010615 Solanum tuberosum HOM05D002412 ORTHO05D002516 5.2e-06 54.7 125 36.8
MELO3C010796.2 Cucumis melo HOM05D002412 ORTHO05D002516 6.8e-06 54.3 109 35.8
DCAR_012823 Daucus carota HOM05D002412 ORTHO05D002516 6.8e-06 54.3 124 40.3
Gohir.A02G080700 Gossypium hirsutum HOM05D002412 ORTHO05D002516 6.8e-06 54.3 127 40.2
Oeu037285.1 Olea europaea HOM05D002412 ORTHO05D002516 6.8e-06 54.3 119 37.0
Actinidia19303 Actinidia chinensis HOM05D002412 ORTHO05D002516 8.9e-06 53.9 110 40.9
Ca_24361_v3 Cicer arietinum L. HOM05D002412 ORTHO05D002516 8.9e-06 53.9 115 40.0
Dinv42242 Davidia involucrata HOM05D002412 ORTHO05D002516 8.9e-06 53.9 130 36.9
Duzib041G0516 Durio zibethinus HOM05D002412 ORTHO05D002516 8.9e-06 53.9 135 36.3


User provided reference genes

Program Settings