Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_578.g16114 Utricularia gibba HOM05D004360 ORTHO05D005195 3.9e-108 394.8 198 100.0
unitig_8.g4904 Utricularia gibba HOM05D004360 ORTHO05D005195 2.6e-48 196.1 114 84.2
arahy.Tifrunner.gnm1.ann1.4Y3JNF Arachis hypogaea HOM05D004360 ORTHO05D005195 1.1e-38 164.1 117 72.6
Potri.003G048300 Populus trichocarpa HOM05D004360 ORTHO05D005195 4.2e-38 162.2 116 70.7
arahy.Tifrunner.gnm1.ann1.19X5J5 Arachis hypogaea HOM05D004360 ORTHO05D005195 5.5e-38 161.8 117 71.8
Oeu020627.1 Olea europaea HOM05D004360 ORTHO05D005195 5.5e-38 161.8 116 72.4
Lj3g0027106 Lotus japonicus HOM05D004360 ORTHO05D005195 1.6e-37 160.2 117 69.2
Glyma.06G323900 Glycine max HOM05D004360 ORTHO05D005195 2.1e-37 159.8 116 69.8
DCAR_014061 Daucus carota HOM05D004360 ORTHO05D005195 4.7e-37 158.7 116 67.2
Hma1.2p1_0016F.1_g010960 Hydrangea macrophylla HOM05D004360 ORTHO05D005195 6.1e-37 158.3 116 69.8
PGR083G1110 Punica granatum HOM05D004360 ORTHO05D005195 7.9e-37 157.9 116 69.0
SGA_v2.0_scaffold118G32638 Striga asiatica HOM05D004360 ORTHO05D005195 1.0e-36 157.5 125 67.2
CSS0027083 Camellia sinensis var. sinensis HOM05D004360 ORTHO05D005195 1.4e-36 157.1 116 66.4
Glyma.04G110500 Glycine max HOM05D004360 ORTHO05D005195 1.8e-36 156.8 116 69.0
Dinv37400 Davidia involucrata HOM05D004360 ORTHO05D005195 2.3e-36 156.4 112 69.6
Cc10_g16090 Coffea canephora HOM05D004360 ORTHO05D005195 3.9e-36 155.6 120 65.8
MD05G1006100 Malus domestica HOM05D004360 ORTHO05D005195 3.9e-36 155.6 116 69.8
Lalb_Chr18g0048451 Lupinus albus HOM05D004360 ORTHO05D005195 5.1e-36 155.2 114 69.3
MSTRG.1609 Avicennia marina HOM05D004360 ORTHO05D005195 1.5e-35 153.7 126 63.5
CANSAT56G1596 Cannabis sativa HOM05D004360 ORTHO05D005195 1.5e-35 153.7 115 67.8
COL.COLO4_25070 Corchorus olitorius HOM05D004360 ORTHO05D005195 2.0e-35 153.3 115 68.7
MBI03_g07140_MAGBIO Magnolia biondii HOM05D004360 ORTHO05D005195 2.6e-35 152.9 116 66.4
TPR.G25525 Trifolium pratense HOM05D004360 ORTHO05D005195 2.6e-35 152.9 116 64.7
TWI12G0674 Tripterygium wilfordii HOM05D004360 ORTHO05D005195 2.6e-35 152.9 116 69.0
Medtr3g006190 Medicago truncatula HOM05D004360 ORTHO05D005195 3.3e-35 152.5 116 63.8
Potri.013G095200 Populus trichocarpa HOM05D004360 ORTHO05D005195 3.3e-35 152.5 116 67.2
QL09p001278 Quercus lobata HOM05D004360 ORTHO05D005195 3.3e-35 152.5 114 64.9
GSVIVG01037160001 Vitis vinifera HOM05D004360 ORTHO05D005195 3.3e-35 152.5 116 68.1
CDE08G1539 Ceratophyllum demersum HOM05D004360 ORTHO05D005195 7.4e-35 151.4 116 63.8
HanXRQChr05g0150501 Helianthus annuus HOM05D004360 ORTHO05D005195 9.7e-35 151.0 123 64.2
Lalb_Chr01g0008181 Lupinus albus HOM05D004360 ORTHO05D005195 2.2e-34 149.8 116 65.5
Nn5g27232 Nelumbo nucifera HOM05D004360 ORTHO05D005195 2.2e-34 149.8 116 65.5
TAR628G1251 Trochodendron aralioides HOM05D004360 ORTHO05D005195 2.2e-34 149.8 114 65.8
Eucgr.F04085 Eucalyptus grandis HOM05D004360 ORTHO05D005195 2.8e-34 149.4 116 66.4
Phvul.005G002300 Phaseolus vulgaris HOM05D004360 ORTHO05D005195 2.8e-34 149.4 111 68.5
Psat5g232320 Pisum sativum HOM05D004360 ORTHO05D005195 3.7e-34 149.1 115 63.5
Oeu028624.1 Olea europaea HOM05D004360 ORTHO05D005195 4.8e-34 148.7 134 58.2
Manes.02G202700 Manihot esculenta HOM05D004360 ORTHO05D005195 6.3e-34 148.3 116 65.5
Nitab4.5_0007335g0050 Nicotiana tabacum HOM05D004360 ORTHO05D005195 8.2e-34 147.9 116 63.8
CsaV3_2G033320 Cucumis sativus L. HOM05D004360 ORTHO05D005195 1.1e-33 147.5 116 64.7
Prupe.8G003400 Prunus persica HOM05D004360 ORTHO05D005195 1.1e-33 147.5 111 67.6
HanXRQChr08g0226271 Helianthus annuus HOM05D004360 ORTHO05D005195 1.4e-33 147.1 120 63.3
Aqoxy5G01853 Aquilegia oxysepala HOM05D004360 ORTHO05D005195 1.8e-33 146.7 116 65.5
Hund16918 Selenicereus undatus HOM05D004360 ORTHO05D005195 1.8e-33 146.7 116 65.5
Actinidia01542 Actinidia chinensis HOM05D004360 ORTHO05D005195 2.4e-33 146.4 116 63.8
Thecc.08G168700 Theobroma cacao HOM05D004360 ORTHO05D005195 3.1e-33 146.0 111 68.5
Duzib116G0053 Durio zibethinus HOM05D004360 ORTHO05D005195 5.3e-33 145.2 116 66.4
VMungo1080G0197 Vigna mungo HOM05D004360 ORTHO05D005195 5.3e-33 145.2 113 67.3
Manes.18G109100 Manihot esculenta HOM05D004360 ORTHO05D005195 1.2e-32 144.1 116 65.5
PGSC0003DMG400033136 Solanum tuberosum HOM05D004360 ORTHO05D005195 1.2e-32 144.1 116 60.3
MELO3C008103.2 Cucumis melo HOM05D004360 ORTHO05D005195 2.0e-32 143.3 116 62.9
FvH4_2g00310 Fragaria vesca HOM05D004360 ORTHO05D005195 2.0e-32 143.3 112 66.1
Gohir.A05G248500 Gossypium hirsutum HOM05D004360 ORTHO05D005195 2.0e-32 143.3 116 62.9
Gohir.D05G250900 Gossypium hirsutum HOM05D004360 ORTHO05D005195 2.0e-32 143.3 116 62.9
Gorai.009G262300 Gossypium raimondii HOM05D004360 ORTHO05D005195 2.0e-32 143.3 116 62.9
Atru.chr13.2581 Acer truncatum HOM05D004360 ORTHO05D005195 2.6e-32 142.9 115 64.3
CDE02G3351 Ceratophyllum demersum HOM05D004360 ORTHO05D005195 2.6e-32 142.9 113 61.9
FAN20G2250 Fragaria x ananassa HOM05D004360 ORTHO05D005195 2.6e-32 142.9 112 65.2
Lsat_1_v5_gn_1_24560 Lactuca sativa HOM05D004360 ORTHO05D005195 3.5e-32 142.5 120 63.3
HanXRQChr12g0369241 Helianthus annuus HOM05D004360 ORTHO05D005195 4.5e-32 142.1 116 61.2
Actinidia29366 Actinidia chinensis HOM05D004360 ORTHO05D005195 5.9e-32 141.7 116 62.9
Ah.05g170480 Amaranthus hybridus HOM05D004360 ORTHO05D005195 1.3e-31 140.6 116 63.8
Carub.0006s2871 Capsella rubella HOM05D004360 ORTHO05D005195 1.3e-31 140.6 116 62.9
MD10G1002100 Malus domestica HOM05D004360 ORTHO05D005195 1.3e-31 140.6 111 65.8
Sp6g07270 Schrenkiella parvula HOM05D004360 ORTHO05D005195 1.3e-31 140.6 116 64.7
Lsat_1_v5_gn_6_109600 Lactuca sativa HOM05D004360 ORTHO05D005195 1.7e-31 140.2 118 61.9
THA.LOC104806751 Tarenaya hassleriana HOM05D004360 ORTHO05D005195 1.7e-31 140.2 114 63.2
Nitab4.5_0000079g0160 Nicotiana tabacum HOM05D004360 ORTHO05D005195 2.2e-31 139.8 135 57.0
Lj7A416T39 Lonicera japonica HOM05D004360 ORTHO05D005195 2.9e-31 139.4 100 67.0
Nitab4.5_0007657g0070 Nicotiana tabacum HOM05D004360 ORTHO05D005195 2.9e-31 139.4 123 59.3
Peaxi162Scf00818g00320 Petunia axillaris HOM05D004360 ORTHO05D005195 2.9e-31 139.4 101 66.3
Sopen06g022920 Solanum pennellii HOM05D004360 ORTHO05D005195 2.9e-31 139.4 116 58.6
TWI18G1157 Tripterygium wilfordii HOM05D004360 ORTHO05D005195 2.9e-31 139.4 105 67.6
HPP92_001197 Vanilla planifolia HOM05D004360 ORTHO05D005195 2.9e-31 139.4 116 59.5
Solyc06g064450.3 Solanum lycopersicum HOM05D004360 ORTHO05D005195 3.8e-31 139.0 116 58.6
PSO761G0584 Papaver somniferum HOM05D004360 ORTHO05D005195 5.0e-31 138.7 116 60.3
CARHR261230 Cardamine hirsuta HOM05D004360 ORTHO05D005195 6.5e-31 138.3 120 60.8
BcaB01g01456 Brassica carinata HOM05D004360 ORTHO05D005195 8.5e-31 137.9 149 51.7
ClCG11G008280 Citrullus lanatus HOM05D004360 ORTHO05D005195 8.5e-31 137.9 111 64.0
ATR1089G020 Amborella trichopoda HOM05D004360 ORTHO05D005195 1.1e-30 137.5 116 62.1
AT4G10140 Arabidopsis thaliana HOM05D004360 ORTHO05D005195 1.1e-30 137.5 120 60.8
Ciclev10022474m.g Citrus clementina HOM05D004360 ORTHO05D005195 1.1e-30 137.5 111 64.0
ECA247G3060 Erigeron canadensis HOM05D004360 ORTHO05D005195 1.1e-30 137.5 118 61.0
HPP92_009217 Vanilla planifolia HOM05D004360 ORTHO05D005195 1.1e-30 137.5 113 64.6
Peaxi162Scf00078g00103 Petunia axillaris HOM05D004360 ORTHO05D005195 1.5e-30 137.1 128 54.7
Solyc11g045030.2 Solanum lycopersicum HOM05D004360 ORTHO05D005195 1.5e-30 137.1 131 52.7
Carub.0001s3168 Capsella rubella HOM05D004360 ORTHO05D005195 1.9e-30 136.7 97 67.0
AL1G47880 Arabidopsis lyrata HOM05D004360 ORTHO05D005195 2.5e-30 136.3 97 67.0
BcaB05g23914 Brassica carinata HOM05D004360 ORTHO05D005195 2.5e-30 136.3 116 62.9
A02p26710 Brassica napus HOM05D004360 ORTHO05D005195 2.5e-30 136.3 116 62.9
BolC2t10286H Brassica oleracea HOM05D004360 ORTHO05D005195 2.5e-30 136.3 116 62.9
BraA02t07674Z Brassica rapa HOM05D004360 ORTHO05D005195 2.5e-30 136.3 116 62.9
CAN.G970.20 Capsicum annuum HOM05D004360 ORTHO05D005195 2.5e-30 136.3 134 55.2
BcaC03g16418 Brassica carinata HOM05D004360 ORTHO05D005195 3.2e-30 136.0 116 62.9
C02p42460 Brassica napus HOM05D004360 ORTHO05D005195 3.2e-30 136.0 116 62.9
AL6G43950 Arabidopsis lyrata HOM05D004360 ORTHO05D005195 5.5e-30 135.2 117 63.2
Sopen11g020480 Solanum pennellii HOM05D004360 ORTHO05D005195 7.2e-30 134.8 131 53.4
AUR62038546 Chenopodium quinoa HOM05D004360 ORTHO05D005195 9.4e-30 134.4 115 60.0
AUR62013395 Chenopodium quinoa HOM05D004360 ORTHO05D005195 1.2e-29 134.0 115 60.0
Thhalv10008879m.g Eutrema salsugineum HOM05D004360 ORTHO05D005195 1.6e-29 133.7 117 60.7
PSO210G5265 Papaver somniferum HOM05D004360 ORTHO05D005195 1.6e-29 133.7 112 58.9
TPR.G4421 Trifolium pratense HOM05D004360 ORTHO05D001407 2.1e-29 133.3 114 57.9
CAN.G14.46 Capsicum annuum HOM05D004360 ORTHO05D005195 2.7e-29 132.9 96 63.5
Thhalv10029009m.g Eutrema salsugineum HOM05D004360 ORTHO05D005195 2.7e-29 132.9 116 60.3
PSO210G7326 Papaver somniferum HOM05D004360 ORTHO05D005195 2.7e-29 132.9 111 60.4
Medtr4g030060 Medicago truncatula HOM05D004360 ORTHO05D005195 4.7e-29 132.1 117 55.6
Sed0002471 Sechium edule HOM05D004360 ORTHO05D005195 4.7e-29 132.1 100 66.0
BcaC08g43849 Brassica carinata HOM05D004360 ORTHO05D005195 6.1e-29 131.7 116 57.8
A09p32780 Brassica napus HOM05D004360 ORTHO05D005195 6.1e-29 131.7 111 57.7
BolC6t36383H Brassica oleracea HOM05D004360 ORTHO05D005195 6.1e-29 131.7 116 57.8
BraA09t38813Z Brassica rapa HOM05D004360 ORTHO05D005195 6.1e-29 131.7 111 57.7
RcHm_v2.0_Chr6g0249591 Rosa chinensis HOM05D004360 ORTHO05D005195 6.1e-29 131.7 111 62.2
EL10Ac1g01286 Beta vulgaris HOM05D004360 ORTHO05D005195 8.0e-29 131.3 113 60.2
Aa31LG9G11860 Aethionema arabicum HOM05D004360 ORTHO05D005195 1.4e-28 130.6 124 58.9
SEGI_09604 Sequoiadendron giganteum HOM05D004360 ORTHO05D005195 1.4e-28 130.6 120 54.2
Sed0011254 Sechium edule HOM05D004360 ORTHO05D005195 1.8e-28 130.2 120 58.3
C06p12320 Brassica napus HOM05D004360 ORTHO05D005195 2.3e-28 129.8 116 57.8
AUR62038559 Chenopodium quinoa HOM05D004360 ORTHO05D005195 3.0e-28 129.4 110 59.1
ECA246G3009 Erigeron canadensis HOM05D004360 ORTHO05D005195 3.0e-28 129.4 108 60.2
Psat7g229800 Pisum sativum HOM05D004360 ORTHO05D005195 3.0e-28 129.4 119 53.8
A09p28790 Brassica napus HOM05D004360 ORTHO05D005195 4.0e-28 129.0 116 57.8
SHI16862 Sapria himalayana HOM05D004360 ORTHO05D005195 4.0e-28 129.0 113 59.3
PGSC0003DMG400006668 Solanum tuberosum HOM05D004360 ORTHO05D005195 4.0e-28 129.0 96 60.4
BcaB07g32992 Brassica carinata HOM05D004360 ORTHO05D005195 3.3e-27 125.9 97 61.9
BcaC04g21022 Brassica carinata HOM05D004360 ORTHO05D005195 4.4e-27 125.6 116 58.6
C09p36560 Brassica napus HOM05D004360 ORTHO05D005195 4.4e-27 125.6 116 58.6
Gohir.D08G249500 Gossypium hirsutum HOM05D004360 ORTHO05D005195 7.5e-27 124.8 93 67.7
Gorai.004G266100 Gossypium raimondii HOM05D004360 ORTHO05D005195 7.5e-27 124.8 93 67.7
Os05g0105500 Oryza sativa ssp. japonica HOM05D004360 ORTHO05D005195 7.5e-27 124.8 101 57.4
Gohir.A08G229200 Gossypium hirsutum HOM05D004360 ORTHO05D005195 9.7e-27 124.4 93 66.7
Rhsim12G0001800 Rhododendron simsii HOM05D004360 ORTHO05D005195 1.7e-26 123.6 192 43.2
Aa31LG6G7960 Aethionema arabicum HOM05D004360 ORTHO05D005195 4.8e-26 122.1 116 53.4
Zm00001eb207120 Zea mays HOM05D004360 ORTHO05D005195 5.9e-24 115.2 101 53.5
BraA09t38441Z Brassica rapa HOM05D004360 ORTHO05D005195 1.7e-23 113.6 145 46.2
Zm00001eb289060 Zea mays HOM05D004360 ORTHO05D005195 1.1e-22 110.9 101 52.5
BolC9t56489H Brassica oleracea HOM05D004360 ORTHO05D005195 1.9e-22 110.2 145 46.9
Migut.C01399 Erythranthe guttata HOM05D004360 ORTHO05D005195 3.6e-21 105.9 108 54.6
TAR375G0667 Trochodendron aralioides HOM05D004360 ORTHO05D005195 5.2e-20 102.1 112 53.6
Mapoly0022s0158 Marchantia polymorpha HOM05D004360 ORTHO05D005195 8.8e-20 101.3 107 49.5
CARHR032930 Cardamine hirsuta HOM05D004360 ORTHO05D005195 5.7e-19 98.6 61 78.7
Sabra13G0081200 Salix brachista HOM05D004360 ORTHO05D005195 5.7e-19 98.6 61 75.4
CBR_g61487 Chara braunii HOM05D004360 ORTHO05D005195 9.8e-19 97.8 104 48.1
Sp1g28930 Schrenkiella parvula HOM05D004360 ORTHO05D002912 9.8e-19 97.8 61 77.0
AT1G33490 Arabidopsis thaliana HOM05D004360 ORTHO05D005195 1.7e-18 97.1 61 77.0
SMO143G0101 Selaginella moellendorffii HOM05D004360 ORTHO05D005195 1.7e-18 97.1 90 50.0
CiPaw.03G012600 Carya illinoinensis HOM05D004360 ORTHO05D005195 2.2e-18 96.7 61 72.1
Haze_14005 Corylus avellana HOM05D004360 ORTHO05D005195 2.8e-18 96.3 60 76.7
Duzib116G0205 Durio zibethinus HOM05D004360 ORTHO05D005195 3.7e-18 95.9 60 76.7
FAN24G1049 Fragaria x ananassa HOM05D004360 ORTHO05D005195 6.3e-18 95.1 92 54.3
SEGI_01847 Sequoiadendron giganteum HOM05D004360 ORTHO05D005195 6.3e-18 95.1 110 45.5
Sc06g0000070 Simmondsia chinensis HOM05D004360 ORTHO05D005195 4.1e-17 92.4 61 68.9
SMO356G0006 Selaginella moellendorffii HOM05D004360 ORTHO05D005195 7.0e-17 91.7 108 38.9
Pp3c17_19860 Physcomitrium patens HOM05D004360 ORTHO05D005195 3.5e-16 89.4 89 51.7
AagrBONN_evm.TU.Sc2ySwM_368.413 Anthoceros agrestis HOM05D004360 ORTHO05D005195 4.5e-16 89.0 87 47.1
DCAR_003506 Daucus carota HOM05D005117 ORTHO05D005956 7.7e-16 88.2 61 65.6
Pp3c23_11640 Physcomitrium patens HOM05D004360 ORTHO05D005195 1.7e-15 87.0 81 53.1
HanXRQChr09g0244511 Helianthus annuus HOM05D004360 ORTHO05D005195 4.2e-14 82.4 68 60.3
Pp3c14_12450 Physcomitrium patens HOM05D004360 ORTHO05D005195 4.7e-13 79.0 87 43.7
Dinv02982 Davidia involucrata HOM05D004360 ORTHO05D005195 4.9e-10 68.9 52 67.3
Dinv17160 Davidia involucrata HOM05D004360 ORTHO05D005195 4.9e-10 68.9 52 67.3
Dinv04074 Davidia involucrata HOM05D004360 ORTHO05D005195 2.4e-09 66.6 53 64.2
Dinv08764 Davidia involucrata HOM05D004360 ORTHO05D005195 2.4e-09 66.6 46 67.4
arahy.Tifrunner.gnm1.ann1.B7FYB2 Arachis hypogaea HOM05D001689 ORTHO05D001643 5.9e-08 62.0 44 65.9


User provided reference genes

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