Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_578.g16057 Utricularia gibba HOM05D003667 ORTHO05D004397 1.4e-93 346.3 180 100.0
unitig_8.g4943 Utricularia gibba HOM05D003667 ORTHO05D004397 2.0e-58 229.6 216 63.4
Migut.L01870 Erythranthe guttata HOM05D003667 ORTHO05D004397 2.5e-53 212.6 144 74.3
SGA_v2.0_scaffold41G15803 Striga asiatica HOM05D003667 ORTHO05D004397 2.1e-52 209.5 142 72.5
SGA_v2.0_scaffold392G50657 Striga asiatica HOM05D003667 ORTHO05D004397 1.0e-51 207.2 144 72.9
MSTRG.26557 Avicennia marina HOM05D003667 ORTHO05D004397 1.1e-50 203.8 215 54.9
Oeu035461.1 Olea europaea HOM05D003667 ORTHO05D004397 1.1e-50 203.8 215 55.8
Lj2A112G40 Lonicera japonica HOM05D003667 ORTHO05D004397 4.8e-49 198.4 205 55.6
MSTRG.10431 Avicennia marina HOM05D003667 ORTHO05D004397 1.1e-48 197.2 149 67.8
DCAR_013483 Daucus carota HOM05D003667 ORTHO05D004397 5.3e-48 194.9 145 67.6
Nitab4.5_0001741g0020 Nicotiana tabacum HOM05D003667 ORTHO05D004397 1.2e-47 193.7 218 50.9
COL.COLO4_28620 Corchorus olitorius HOM05D003667 ORTHO05D004397 4.5e-47 191.8 145 66.9
Gohir.A11G231200 Gossypium hirsutum HOM05D003667 ORTHO05D004397 4.5e-47 191.8 145 67.6
Gohir.D11G242600 Gossypium hirsutum HOM05D003667 ORTHO05D004397 4.5e-47 191.8 145 67.6
Gorai.007G256800 Gossypium raimondii HOM05D003667 ORTHO05D004397 4.5e-47 191.8 145 67.6
Hma1.2p1_0106F.1_g051140 Hydrangea macrophylla HOM05D003667 ORTHO05D004397 5.9e-47 191.4 204 54.4
Sopen07g024170 Solanum pennellii HOM05D003667 ORTHO05D004397 7.7e-47 191.0 214 50.5
PGSC0003DMG400006127 Solanum tuberosum HOM05D003667 ORTHO05D004397 1.0e-46 190.7 174 55.7
Solyc07g047720.3 Solanum lycopersicum HOM05D003667 ORTHO05D004397 1.3e-46 190.3 174 55.7
Thecc.05G244000 Theobroma cacao HOM05D003667 ORTHO05D004397 1.3e-46 190.3 145 67.6
Duzib106G0749 Durio zibethinus HOM05D003667 ORTHO05D004397 1.7e-46 189.9 145 66.9
Nitab4.5_0001774g0040 Nicotiana tabacum HOM05D003667 ORTHO05D004397 1.7e-46 189.9 145 64.1
PGSC0003DMG400018832 Solanum tuberosum HOM05D003667 ORTHO05D004397 1.7e-46 189.9 215 51.2
CAN.G992.19 Capsicum annuum HOM05D003667 ORTHO05D004397 2.9e-46 189.1 145 64.1
Eucgr.K01520 Eucalyptus grandis HOM05D003667 ORTHO05D004397 3.2e-45 185.7 145 64.8
TWI38G1994 Tripterygium wilfordii HOM05D003667 ORTHO05D004397 3.2e-45 185.7 145 66.2
Actinidia06203 Actinidia chinensis HOM05D003667 ORTHO05D004397 7.2e-45 184.5 211 51.2
RcHm_v2.0_Chr5g0045181 Rosa chinensis HOM05D003667 ORTHO05D004397 7.2e-45 184.5 204 51.5
Haze_14026 Corylus avellana HOM05D003667 ORTHO05D004397 9.4e-45 184.1 205 51.2
Ciclev10022078m.g Citrus clementina HOM05D003667 ORTHO05D004397 1.6e-44 183.3 145 64.1
FAN21G0540 Fragaria x ananassa HOM05D003667 ORTHO05D004397 1.6e-44 183.3 204 51.0
Actinidia07960 Actinidia chinensis HOM05D003667 ORTHO05D004397 2.7e-44 182.6 211 50.7
FAN25G1089 Fragaria x ananassa HOM05D003667 ORTHO05D004397 6.1e-44 181.4 204 51.0
HanXRQChr07g0197181 Helianthus annuus HOM05D003667 ORTHO05D004397 8.0e-44 181.0 145 64.1
CANSAT78G1932 Cannabis sativa HOM05D003667 ORTHO05D004397 1.0e-43 180.6 208 51.4
CiPaw.03G011100 Carya illinoinensis HOM05D003667 ORTHO05D004397 1.4e-43 180.3 206 50.0
ClCG04G005470 Citrullus lanatus HOM05D003667 ORTHO05D004397 1.8e-43 179.9 206 51.0
GSVIVG01029952001 Vitis vinifera HOM05D003667 ORTHO05D004397 1.8e-43 179.9 206 51.0
MELO3C008823.2 Cucumis melo HOM05D003667 ORTHO05D004397 2.3e-43 179.5 206 51.0
Atru.chr2.1481 Acer truncatum HOM05D003667 ORTHO05D004397 3.0e-43 179.1 176 56.8
FvH4_3g25040 Fragaria vesca HOM05D003667 ORTHO05D004397 3.0e-43 179.1 202 50.5
FAN11G0144 Fragaria x ananassa HOM05D003667 ORTHO05D004397 6.7e-43 177.9 202 50.0
PSO170G5262 Papaver somniferum HOM05D003667 ORTHO05D004397 6.7e-43 177.9 206 49.5
CsaV3_4G012110 Cucumis sativus L. HOM05D003667 ORTHO05D004397 8.8e-43 177.6 206 50.5
Sed0010728 Sechium edule HOM05D003667 ORTHO05D004397 8.8e-43 177.6 206 50.0
MBI17_g12494_MAGBIO Magnolia biondii HOM05D003667 ORTHO05D004397 1.2e-42 177.2 209 47.8
TWI38G1198 Tripterygium wilfordii HOM05D003667 ORTHO05D004397 1.2e-42 177.2 145 63.4
CSS0004374 Camellia sinensis var. sinensis HOM05D003667 ORTHO05D004397 1.5e-42 176.8 207 48.3
HPP92_027259 Vanilla planifolia HOM05D003667 ORTHO05D004397 2.0e-42 176.4 145 59.3
PSO357G0141 Papaver somniferum HOM05D003667 ORTHO05D004397 7.5e-42 174.5 206 49.0
Hund10761 Selenicereus undatus HOM05D003667 ORTHO05D004397 9.7e-42 174.1 204 48.5
MD02G1195300 Malus domestica HOM05D003667 ORTHO05D004397 1.7e-41 173.3 145 60.7
Rhsim02G0195900 Rhododendron simsii HOM05D003667 ORTHO05D004397 1.7e-41 173.3 141 61.7
THA.LOC104823778 Tarenaya hassleriana HOM05D003667 ORTHO05D004397 1.7e-41 173.3 145 62.1
Cc03_g11050 Coffea canephora HOM05D003667 ORTHO05D004397 2.2e-41 172.9 145 62.1
CSS0013214 Camellia sinensis var. sinensis HOM05D003667 ORTHO05D004397 2.8e-41 172.6 207 47.8
ClCG02G007830 Citrullus lanatus HOM05D003667 ORTHO05D004397 2.8e-41 172.6 205 49.3
TAR623G0153 Trochodendron aralioides HOM05D003667 ORTHO05D004397 2.8e-41 172.6 201 52.2
Peaxi162Scf00776g00027 Petunia axillaris HOM05D003667 ORTHO05D004397 3.7e-41 172.2 196 49.5
Manes.09G137700 Manihot esculenta HOM05D003667 ORTHO05D004397 4.8e-41 171.8 145 61.4
Nn7g37255 Nelumbo nucifera HOM05D003667 ORTHO05D004397 4.8e-41 171.8 205 48.8
Rhsim13G0206500 Rhododendron simsii HOM05D003667 ORTHO05D004397 4.8e-41 171.8 204 49.5
Nn6g34578 Nelumbo nucifera HOM05D003667 ORTHO05D004397 6.3e-41 171.4 206 47.6
PSO675G2224 Papaver somniferum HOM05D003667 ORTHO05D004397 1.8e-40 169.9 206 49.0
Sp4g19200 Schrenkiella parvula HOM05D003667 ORTHO05D004397 2.4e-40 169.5 174 54.0
Thhalv10017208m.g Eutrema salsugineum HOM05D003667 ORTHO05D004397 4.1e-40 168.7 174 52.9
AT2G36900 Arabidopsis thaliana HOM05D003667 ORTHO05D004397 5.3e-40 168.3 145 59.3
Os03g0655200 Oryza sativa ssp. japonica HOM05D003667 ORTHO05D004397 5.3e-40 168.3 145 57.2
CARHR131380 Cardamine hirsuta HOM05D003667 ORTHO05D004397 7.0e-40 167.9 203 47.8
CiPaw.04G007600 Carya illinoinensis HOM05D003667 ORTHO05D004397 7.0e-40 167.9 139 61.2
BcaC02g11814 Brassica carinata HOM05D003667 ORTHO05D004397 1.2e-39 167.2 145 59.3
AL8G24670 Arabidopsis lyrata HOM05D003667 ORTHO05D004397 2.0e-39 166.4 145 58.6
BraA05t19858Z Brassica rapa HOM05D003667 ORTHO05D004397 2.0e-39 166.4 204 48.5
Aa31LG6G14320 Aethionema arabicum HOM05D003667 ORTHO05D004397 2.7e-39 166.0 145 58.6
A05p08960 Brassica napus HOM05D003667 ORTHO05D004397 2.7e-39 166.0 204 48.5
C04p11070 Brassica napus HOM05D003667 ORTHO05D004397 2.7e-39 166.0 204 48.5
BolC4t22755H Brassica oleracea HOM05D003667 ORTHO05D004397 2.7e-39 166.0 204 48.5
Sed0016620 Sechium edule HOM05D003667 ORTHO05D004397 2.7e-39 166.0 206 49.0
SEGI_40073 Sequoiadendron giganteum HOM05D003667 ORTHO05D004397 2.7e-39 166.0 216 45.4
AL4G33130 Arabidopsis lyrata HOM05D003667 ORTHO05D004397 3.5e-39 165.6 203 47.8
BcaB02g09321 Brassica carinata HOM05D003667 ORTHO05D004397 3.5e-39 165.6 174 52.9
CARHR257860 Cardamine hirsuta HOM05D003667 ORTHO05D004397 3.5e-39 165.6 145 58.6
Sabra13G0056100 Salix brachista HOM05D003667 ORTHO05D004397 3.5e-39 165.6 136 63.2
Lj2g0005685 Lotus japonicus HOM05D003667 ORTHO05D004397 4.5e-39 165.2 200 49.5
Medtr5g090520 Medicago truncatula HOM05D003667 ORTHO05D004397 4.5e-39 165.2 204 49.5
Potri.013G062900 Populus trichocarpa HOM05D003667 ORTHO05D004397 4.5e-39 165.2 134 64.2
Zm00001eb052810 Zea mays HOM05D003667 ORTHO05D004397 5.9e-39 164.9 145 56.6
AT5G50440 Arabidopsis thaliana HOM05D003667 ORTHO05D004397 1.0e-38 164.1 145 57.9
Thhalv10014611m.g Eutrema salsugineum HOM05D003667 ORTHO05D004397 1.0e-38 164.1 145 57.9
PSO541G6155 Papaver somniferum HOM05D003667 ORTHO05D004397 1.0e-38 164.1 206 48.5
TPR.G8769 Trifolium pratense HOM05D003667 ORTHO05D004397 1.7e-38 163.3 206 49.5
Glyma.08G304700 Glycine max HOM05D003667 ORTHO05D004397 2.2e-38 162.9 207 47.3
Glyma.18G114700 Glycine max HOM05D003667 ORTHO05D004397 2.9e-38 162.5 142 61.3
Lj6g0022641 Lotus japonicus HOM05D003667 ORTHO05D004397 2.9e-38 162.5 136 61.8
Carub.0004s1876 Capsella rubella HOM05D003667 ORTHO05D004397 3.8e-38 162.2 203 47.3
Phvul.006G027100 Phaseolus vulgaris HOM05D003667 ORTHO05D004397 3.8e-38 162.2 204 49.5
Prupe.2G153200 Prunus persica HOM05D003667 ORTHO05D004397 6.5e-38 161.4 202 48.0
arahy.Tifrunner.gnm1.ann1.7QGR70 Arachis hypogaea HOM05D003667 ORTHO05D004397 8.5e-38 161.0 201 48.8
Prupe.7G022400 Prunus persica HOM05D003667 ORTHO05D004397 8.5e-38 161.0 143 58.7
Carub.0008s1055 Capsella rubella HOM05D003667 ORTHO05D004397 1.1e-37 160.6 174 51.1
Aqoxy1G00535 Aquilegia oxysepala HOM05D003667 ORTHO05D004397 1.5e-37 160.2 205 46.3
Cpa.g.sc28.13 Carica papaya HOM05D003667 ORTHO05D004397 1.5e-37 160.2 202 47.0
arahy.Tifrunner.gnm1.ann1.FV18MX Arachis hypogaea HOM05D003667 ORTHO05D004397 2.5e-37 159.5 201 48.3
Lalb_Chr17g0348151 Lupinus albus HOM05D003667 ORTHO05D004397 2.5e-37 159.5 168 55.4
VMungo0540G2144 Vigna mungo HOM05D003667 ORTHO05D004397 2.5e-37 159.5 199 49.7
Psat2g018160 Pisum sativum HOM05D003667 ORTHO05D004397 4.2e-37 158.7 167 54.5
MBI05_g12099_MAGBIO Magnolia biondii HOM05D003667 ORTHO05D004397 5.5e-37 158.3 195 47.7
Medtr3g450200 Medicago truncatula HOM05D003667 ORTHO05D004397 9.4e-37 157.5 210 45.7
Ca_13917_v3 Cicer arietinum L. HOM05D003667 ORTHO05D004397 1.2e-36 157.1 210 45.2
Ca_06238_v3 Cicer arietinum L. HOM05D003667 ORTHO05D004397 2.1e-36 156.4 145 60.0
arahy.Tifrunner.gnm1.ann1.VNW58P Arachis hypogaea HOM05D003667 ORTHO05D004397 2.7e-36 156.0 198 48.0
CDE10G1021 Ceratophyllum demersum HOM05D003667 ORTHO05D004397 2.7e-36 156.0 142 57.7
TPR.G14738 Trifolium pratense HOM05D003667 ORTHO05D004397 4.0e-35 152.1 145 57.9
Psat5g209680 Pisum sativum HOM05D003667 ORTHO05D004397 8.8e-35 151.0 207 44.0
Mapoly0001s0234 Marchantia polymorpha HOM05D003667 ORTHO05D004397 1.2e-34 150.6 203 45.8
Nitab4.5_0001701g0060 Nicotiana tabacum HOM05D003667 ORTHO05D004397 3.4e-34 149.1 176 47.7
SMO358G0442 Selaginella moellendorffii HOM05D003667 ORTHO05D004397 5.7e-34 148.3 212 43.4
Pp3c7_13000 Physcomitrium patens HOM05D003667 ORTHO05D004397 2.2e-33 146.4 145 47.6
Cfa017699 Carpinus fangiana HOM05D003667 ORTHO05D004397 9.1e-32 141.0 109 63.3
HanXRQChr14g0453611 Helianthus annuus HOM05D003667 ORTHO05D004397 1.2e-31 140.6 145 54.5
Haze_20440 Corylus avellana HOM05D003667 ORTHO05D004397 1.6e-31 140.2 110 62.7
Pp3c11_11980 Physcomitrium patens HOM05D003667 ORTHO05D004397 3.5e-31 139.0 145 46.9
Solyc05g040100.4 Solanum lycopersicum HOM05D003667 ORTHO05D004397 1.0e-30 137.5 191 41.4
arahy.Tifrunner.gnm1.ann1.B982CP Arachis hypogaea HOM05D003667 ORTHO05D004397 1.1e-29 134.0 182 46.2
Lsat_1_v5_gn_6_31701 Lactuca sativa HOM05D003667 ORTHO05D004397 1.1e-29 134.0 206 44.2
Cre12.g554200 Chlamydomonas reinhardtii HOM05D003667 ORTHO05D004397 7.2e-29 131.3 143 48.3
Lsat_1_v5_gn_2_103600 Lactuca sativa HOM05D003667 ORTHO05D004397 3.6e-28 129.0 201 42.8
Lalb_Chr10g0106501 Lupinus albus HOM05D003667 ORTHO05D004397 1.0e-27 127.5 110 62.7
CSS0044789 Camellia sinensis var. sinensis HOM05D003667 ORTHO05D004397 4.4e-26 122.1 144 47.2
AUR62008662 Chenopodium quinoa HOM05D003667 ORTHO05D004397 5.7e-26 121.7 201 39.8
EL10Ac7g17477 Beta vulgaris HOM05D003667 ORTHO05D004397 4.9e-25 118.6 142 46.5
Oeu003870.1 Olea europaea HOM05D003667 ORTHO05D004397 1.3e-22 110.5 90 63.3
Dinv05568 Davidia involucrata HOM05D003667 ORTHO05D004397 8.6e-22 107.8 152 43.4
Actinidia03933 Actinidia chinensis HOM05D003667 ORTHO05D004397 2.5e-21 106.3 131 49.6
Ah.02g128310 Amaranthus hybridus HOM05D003667 ORTHO05D004397 7.3e-21 104.8 153 45.8
BcaC02g10601 Brassica carinata HOM05D003667 ORTHO05D004397 2.1e-20 103.2 137 44.5
Sc01g0006150 Simmondsia chinensis HOM05D003667 ORTHO05D004397 3.6e-20 102.4 113 51.3
MCO05G601 Micromonas commoda HOM05D003667 ORTHO05D004397 8.0e-20 101.3 142 37.3
ECA238G3478 Erigeron canadensis HOM05D003667 ORTHO05D004397 2.3e-19 99.8 145 42.1
CBR_g20321 Chara braunii HOM05D003667 ORTHO05D004397 3.0e-19 99.4 105 49.5
BcaB06g28959 Brassica carinata HOM05D003667 ORTHO05D004397 4.0e-19 99.0 75 64.0
PRCOL_00002098 Prasinoderma coloniale HOM05D003667 ORTHO05D004397 2.0e-18 96.7 177 36.2
AagrBONN_evm.TU.Sc2ySwM_117.3822 Anthoceros agrestis HOM05D003667 ORTHO05D004397 2.6e-18 96.3 174 41.4
AUR62033108 Chenopodium quinoa HOM05D003667 ORTHO05D004397 3.4e-18 95.9 90 55.6
QL07p048797 Quercus lobata HOM05D000002 ORTHO05D000001 4.4e-18 95.5 89 58.4
AagrBONN_evm.TU.Sc2ySwM_362.869 Anthoceros agrestis HOM05D003667 ORTHO05D004397 1.3e-17 94.0 129 47.3
Oeu063104.1 Olea europaea HOM05D003667 ORTHO05D004397 1.8e-16 90.1 185 36.2
Glyma.02G282800 Glycine max HOM05D003667 ORTHO05D004397 1.2e-15 87.4 74 60.8
FAN16G1288 Fragaria x ananassa HOM05D003667 ORTHO05D004397 3.5e-15 85.9 58 67.2
BolC4t28047H Brassica oleracea HOM05D003667 ORTHO05D004397 9.5e-13 77.8 53 69.8
arahy.Tifrunner.gnm1.ann1.X6I371 Arachis hypogaea HOM05D003667 ORTHO05D004397 3.6e-12 75.9 75 58.7
Ah.08g213160 Amaranthus hybridus HOM05D003667 ORTHO05D004397 4.7e-12 75.5 70 54.3
AUR62033107 Chenopodium quinoa HOM05D003667 ORTHO05D004397 4.7e-12 75.5 50 66.0
BraA04t18306Z Brassica rapa HOM05D003667 ORTHO05D004397 6.2e-12 75.1 52 67.3
A04p28220 Brassica napus HOM05D003667 ORTHO05D004397 8.0e-12 74.7 53 67.9
C04p65580 Brassica napus HOM05D003667 ORTHO05D004397 8.0e-12 74.7 53 67.9
TPR.G36075 Trifolium pratense HOM05D003667 ORTHO05D004397 1.1e-11 74.3 53 66.0
C04p25660 Brassica napus HOM05D003667 ORTHO05D004397 6.4e-09 65.1 89 43.8
C05p50890 Brassica napus HOM05D003667 ORTHO05D004397 6.4e-09 65.1 89 43.8
BNapus_Darmor_BZH_scaffold_271p00010 Brassica napus HOM05D003667 ORTHO05D004397 2.4e-08 63.2 123 35.8
CAN.G1036.8 Capsicum annuum HOM05D003667 ORTHO05D004397 3.2e-08 62.8 63 54.0
CDE10G1036 Ceratophyllum demersum HOM05D003667 ORTHO05D004397 5.4e-08 62.0 142 32.4
arahy.Tifrunner.gnm1.ann1.K13S6W Arachis hypogaea HOM05D004599 ORTHO05D005564 1.6e-07 60.5 92 40.2
HanXRQChr04g0115761 Helianthus annuus HOM05D003667 ORTHO05D004397 1.0e-06 57.8 51 58.8
COL.COLO4_28622 Corchorus olitorius HOM05D003667 ORTHO05D004397 1.7e-06 57.0 78 43.6


User provided reference genes

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