Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_578.g16000 Utricularia gibba HOM05D007003 ORTHO05D008499 7.2e-195 683.7 341 100.0
Oeu007586.1 Olea europaea HOM05D007003 ORTHO05D008499 6.3e-82 308.5 317 52.7
Migut.M01775 Erythranthe guttata HOM05D007003 ORTHO05D008499 4.1e-81 305.8 317 51.7
Nitab4.5_0001913g0010 Nicotiana tabacum HOM05D007003 ORTHO05D008499 9.0e-81 304.7 313 51.8
Nitab4.5_0003812g0060 Nicotiana tabacum HOM05D007003 ORTHO05D008499 2.9e-79 299.7 312 51.0
Dinv40746 Davidia involucrata HOM05D007003 ORTHO05D008499 2.5e-78 296.6 366 48.1
MELO3C018208.2 Cucumis melo HOM05D007003 ORTHO05D008499 5.1e-76 288.9 347 48.4
Actinidia36944 Actinidia chinensis HOM05D001273 ORTHO05D000023 6.7e-76 288.5 308 52.3
CsaV3_3G044430 Cucumis sativus L. HOM05D007003 ORTHO05D008499 6.7e-76 288.5 330 50.0
Cc05_g13800 Coffea canephora HOM05D007003 ORTHO05D008499 8.8e-76 288.1 317 52.1
Peaxi162Scf00964g00113 Petunia axillaris HOM05D007003 ORTHO05D008499 8.2e-74 281.6 347 47.6
Solyc07g064480.1 Solanum lycopersicum HOM05D007003 ORTHO05D008499 1.8e-73 280.4 326 49.1
Sopen07g032680 Solanum pennellii HOM05D007003 ORTHO05D008499 6.9e-73 278.5 316 51.3
PGSC0003DMG400042605 Solanum tuberosum HOM05D007003 ORTHO05D008499 9.1e-73 278.1 316 50.0
Sabra16G0288900 Salix brachista HOM05D007003 ORTHO05D008499 4.5e-72 275.8 350 47.1
CSS0047719 Camellia sinensis var. sinensis HOM05D007003 ORTHO05D008499 3.8e-71 272.7 356 47.5
Lj1P870T43 Lonicera japonica HOM05D007003 ORTHO05D008499 6.5e-71 271.9 335 48.7
Potri.001G423900 Populus trichocarpa HOM05D007003 ORTHO05D008499 6.5e-71 271.9 319 48.3
Sed0008518 Sechium edule HOM05D007003 ORTHO05D008499 1.1e-70 271.2 332 47.6
Glyma.14G024800 Glycine max HOM05D007003 ORTHO05D008499 3.2e-70 269.6 394 42.9
Lalb_Chr04g0248491 Lupinus albus HOM05D007003 ORTHO05D008499 3.2e-70 269.6 372 42.2
DCAR_022556 Daucus carota HOM05D007003 ORTHO05D008499 2.7e-69 266.5 305 49.2
Manes.03G124400 Manihot esculenta HOM05D007003 ORTHO05D008499 3.6e-69 266.2 337 46.0
VMungo0647G1301 Vigna mungo HOM05D007003 ORTHO05D008499 4.7e-69 265.8 395 42.5
vmacro11731 Vaccinium macrocarpon HOM05D007003 ORTHO05D008499 1.4e-68 264.2 311 49.8
Lsat_1_v5_gn_5_6061 Lactuca sativa HOM05D007003 ORTHO05D008499 1.8e-68 263.8 315 47.0
ECA246G4814 Erigeron canadensis HOM05D001273 ORTHO05D000023 1.5e-67 260.8 313 47.6
PGR119G0071 Punica granatum HOM05D007003 ORTHO05D008499 3.3e-67 259.6 374 42.8
Medtr5g092280 Medicago truncatula HOM05D007003 ORTHO05D008499 1.3e-66 257.7 354 43.2
Phvul.008G266200 Phaseolus vulgaris HOM05D007003 ORTHO05D008499 1.3e-66 257.7 389 40.9
SGA_v2.0_scaffold424G51477 Striga asiatica HOM05D007003 ORTHO05D008499 1.3e-66 257.7 335 46.0
Atru.chr2.3373 Acer truncatum HOM05D007003 ORTHO05D008499 4.8e-66 255.8 379 43.3
GSVIVG01037627001 Vitis vinifera HOM05D007003 ORTHO05D008499 4.8e-66 255.8 341 44.6
Gohir.A04G018400 Gossypium hirsutum HOM05D007003 ORTHO05D008499 3.1e-65 253.1 342 43.3
EL10Ac4g07838 Beta vulgaris HOM05D007003 ORTHO05D008499 9.1e-65 251.5 382 41.1
Gorai.009G435200 Gossypium raimondii HOM05D007003 ORTHO05D008499 9.1e-65 251.5 342 43.3
Rhsim06G0216400 Rhododendron simsii HOM05D000561 ORTHO05D000514 1.2e-64 251.1 303 48.5
Gohir.D05G367600 Gossypium hirsutum HOM05D007003 ORTHO05D008499 2.0e-64 250.4 345 42.9
arahy.Tifrunner.gnm1.ann1.422Z41 Arachis hypogaea HOM05D007003 ORTHO05D008499 2.6e-64 250.0 414 37.4
CiPaw.12G128900 Carya illinoinensis HOM05D007003 ORTHO05D008499 5.9e-64 248.8 380 40.8
Ah.04g165820 Amaranthus hybridus HOM05D007003 ORTHO05D008499 1.7e-63 247.3 368 42.7
TPR.G22251 Trifolium pratense HOM05D007003 ORTHO05D008499 1.7e-63 247.3 320 43.4
arahy.Tifrunner.gnm1.ann1.6A6QM9 Arachis hypogaea HOM05D007003 ORTHO05D008499 3.8e-63 246.1 423 37.1
FvH4_3g22471 Fragaria vesca HOM05D007003 ORTHO05D008499 1.9e-62 243.8 419 38.2
AUR62020466 Chenopodium quinoa HOM05D007003 ORTHO05D008499 2.5e-62 243.4 385 39.7
Thecc.07G042400 Theobroma cacao HOM05D007003 ORTHO05D008499 5.5e-62 242.3 450 36.0
TAR627G0793 Trochodendron aralioides HOM05D007003 ORTHO05D008499 5.5e-62 242.3 400 39.8
Ciclev10008359m.g Citrus clementina HOM05D007003 ORTHO05D008499 7.2e-62 241.9 397 39.5
PSO675G0160 Papaver somniferum HOM05D007003 ORTHO05D008499 7.2e-62 241.9 337 42.7
FAN21G0080 Fragaria x ananassa HOM05D007003 ORTHO05D008499 1.2e-61 241.1 419 38.7
AUR62015746 Chenopodium quinoa HOM05D007003 ORTHO05D008499 1.6e-61 240.7 384 38.5
Eucgr.F00779 Eucalyptus grandis HOM05D007003 ORTHO05D008499 1.6e-61 240.7 376 41.0
TWI39G0907 Tripterygium wilfordii HOM05D007003 ORTHO05D008499 2.7e-61 240.0 318 44.3
Aqoxy7G03837 Aquilegia oxysepala HOM05D007003 ORTHO05D008499 3.6e-61 239.6 394 39.6
LjContig00272g0003747 Lotus japonicus HOM05D007003 ORTHO05D008499 3.6e-61 239.6 396 38.9
HPP92_012396 Vanilla planifolia HOM05D007003 ORTHO05D008499 8.0e-61 238.4 358 40.5
HPP92_012320 Vanilla planifolia HOM05D007003 ORTHO05D008499 1.0e-60 238.0 358 40.5
RcHm_v2.0_Chr5g0039141 Rosa chinensis HOM05D007003 ORTHO05D008499 2.3e-60 236.9 470 35.3
A02p10000 Brassica napus HOM05D001404 ORTHO05D008499 1.2e-59 234.6 316 44.9
BraA02t06064Z Brassica rapa HOM05D001404 ORTHO05D002309 1.2e-59 234.6 316 44.9
MD11G1220900 Malus domestica HOM05D001273 ORTHO05D008499 2.6e-59 233.4 434 36.2
C02p16580 Brassica napus HOM05D001404 ORTHO05D002309 3.3e-59 233.0 320 43.8
BolC2t07756H Brassica oleracea HOM05D001404 ORTHO05D002309 3.3e-59 233.0 320 43.8
Nn1g03566 Nelumbo nucifera HOM05D007003 ORTHO05D008499 5.7e-59 232.3 463 36.5
Prupe.4G211300 Prunus persica HOM05D007003 ORTHO05D008499 1.7e-58 230.7 432 36.1
BcaB05g22167 Brassica carinata HOM05D007003 ORTHO05D008499 2.8e-58 229.9 319 44.5
Psat2g013360 Pisum sativum HOM05D007003 ORTHO05D008499 1.4e-57 227.6 314 42.7
Eucgr.F00790 Eucalyptus grandis HOM05D007003 ORTHO05D008499 3.1e-57 226.5 357 42.0
Cpa.g.sc97.17 Carica papaya HOM05D007003 ORTHO05D008499 5.3e-57 225.7 437 36.6
Cfa020358 Carpinus fangiana HOM05D007003 ORTHO05D008499 7.0e-57 225.3 440 35.9
Haze_09661 Corylus avellana HOM05D007003 ORTHO05D008499 1.2e-56 224.6 458 34.7
Sp6g16850 Schrenkiella parvula HOM05D007003 ORTHO05D008499 5.9e-56 222.2 364 40.4
SalBow8G3099 Salvia bowleyana HOM05D007003 ORTHO05D008499 1.7e-55 220.7 192 58.3
Cfa020360 Carpinus fangiana HOM05D007003 ORTHO05D008499 5.0e-55 219.2 426 37.3
Thhalv10013739m.g Eutrema salsugineum HOM05D007003 ORTHO05D008499 6.5e-55 218.8 365 39.7
Aa31LG3G10810 Aethionema arabicum HOM05D007003 ORTHO05D008499 8.5e-55 218.4 358 39.7
CARHR268220 Cardamine hirsuta HOM05D007003 ORTHO05D008499 1.1e-54 218.0 358 39.9
Eucgr.F00955 Eucalyptus grandis HOM05D007003 ORTHO05D008499 1.1e-54 218.0 334 40.1
THA.LOC104817663 Tarenaya hassleriana HOM05D007003 ORTHO05D008499 1.1e-54 218.0 401 37.2
AT5G54880 Arabidopsis thaliana HOM05D007003 ORTHO05D008499 2.5e-54 216.9 359 37.3
AL8G30340 Arabidopsis lyrata HOM05D007003 ORTHO05D008499 9.4e-54 214.9 367 37.9
Duzib213G0769 Durio zibethinus HOM05D007003 ORTHO05D008499 3.6e-53 213.0 480 33.8
QL03p009927 Quercus lobata HOM05D007003 ORTHO05D008499 4.7e-53 212.6 455 34.5
QL08p011145 Quercus lobata HOM05D007003 ORTHO05D008499 4.0e-52 209.5 455 33.8
Eucgr.F00879 Eucalyptus grandis HOM05D007003 ORTHO05D008499 2.0e-51 207.2 334 41.9
CANSAT21G1622 Cannabis sativa HOM05D007003 ORTHO05D008499 2.6e-51 206.8 435 34.0
Actinidia05100 Actinidia chinensis HOM05D007003 ORTHO05D008499 5.7e-51 205.7 190 57.4
ATR0752G213 Amborella trichopoda HOM05D007003 ORTHO05D008499 1.3e-50 204.5 432 33.3
Eucgr.L01323 Eucalyptus grandis HOM05D007003 ORTHO05D008499 1.8e-49 200.7 327 40.7
Sc16g0006140 Simmondsia chinensis HOM05D007003 ORTHO05D008499 9.1e-49 198.4 363 35.0
SEGI_36701 Sequoiadendron giganteum HOM05D007003 ORTHO05D008499 1.2e-45 188.0 311 37.0
Ca_26481_v3 Cicer arietinum L. HOM05D007003 ORTHO05D008499 1.0e-44 184.9 190 51.1
Eucgr.F00922 Eucalyptus grandis HOM05D007003 ORTHO05D008499 4.0e-44 183.0 345 37.7
MBI02_g22102_MAGBIO Magnolia biondii HOM05D007003 ORTHO05D008499 5.2e-44 182.6 152 60.5
Zm00001eb219850 Zea mays HOM05D007003 ORTHO05D008499 2.0e-43 180.6 477 29.1
Eucgr.F00913 Eucalyptus grandis HOM05D007003 ORTHO05D008499 1.3e-42 177.9 358 36.3
MBI02_g19288_MAGBIO Magnolia biondii HOM05D007003 ORTHO05D008499 3.5e-40 169.9 152 59.2
Eucgr.F00897 Eucalyptus grandis HOM05D007003 ORTHO05D008499 5.0e-39 166.0 301 37.5
CDE11G0477 Ceratophyllum demersum HOM05D007003 ORTHO05D008499 3.3e-38 163.3 251 37.1
Os03g0568600 Oryza sativa ssp. japonica HOM05D007003 ORTHO05D008499 7.3e-38 162.2 481 28.9
Eucgr.F00928 Eucalyptus grandis HOM05D007003 ORTHO05D008499 1.6e-37 161.0 311 35.0
BcaC03g14277 Brassica carinata HOM05D007003 ORTHO05D008499 2.8e-37 160.2 151 57.6
Zm00001eb026290 Zea mays HOM05D007003 ORTHO05D008499 1.2e-35 154.8 153 51.0
Carub.0008s1518 Capsella rubella HOM05D007003 ORTHO05D008499 2.6e-35 153.7 271 37.3
TPR.G17434 Trifolium pratense HOM05D007003 ORTHO05D008499 2.2e-34 150.6 185 46.5
AagrBONN_evm.TU.Sc2ySwM_362.2079 Anthoceros agrestis HOM05D007003 ORTHO05D008499 4.9e-34 149.4 323 33.4
Ca_03331_v3 Cicer arietinum L. HOM05D007003 ORTHO05D008499 2.8e-29 133.7 141 47.5
Pp3c4_4830 Physcomitrium patens HOM05D007003 ORTHO05D008499 1.7e-26 124.4 300 32.3
SMO339G0013 Selaginella moellendorffii HOM05D007003 ORTHO05D008499 1.9e-25 120.9 306 30.1
Mapoly0032s0131 Marchantia polymorpha HOM05D007003 ORTHO05D008499 7.0e-25 119.0 322 28.3
TPR.G22255 Trifolium pratense HOM05D005190 ORTHO05D006183 2.0e-24 117.5 253 32.4
CAN.G337.122 Capsicum annuum HOM05D007003 ORTHO05D008499 9.5e-22 108.6 81 64.2
MD03G1204100 Malus domestica HOM05D007003 ORTHO05D008499 1.4e-17 94.7 91 52.7
CAN.G337.121 Capsicum annuum HOM05D007003 ORTHO05D008499 5.4e-17 92.8 142 40.8
ClCG05G014280 Citrullus lanatus HOM05D007003 ORTHO05D008499 2.1e-16 90.9 55 69.1
TPR.G1180 Trifolium pratense HOM05D007003 ORTHO05D008499 1.0e-15 88.6 156 35.3
MBI02_g22101_MAGBIO Magnolia biondii HOM05D007003 ORTHO05D002463 1.7e-15 87.8 93 50.5
TPR.G1231 Trifolium pratense HOM05D007003 ORTHO05D008499 3.9e-15 86.7 85 48.2
Zm00001eb352490 Zea mays HOM05D006576 ORTHO05D008499 8.6e-15 85.5 81 48.1
Actinidia05099 Actinidia chinensis HOM05D001273 ORTHO05D000023 7.1e-09 65.9 60 58.3
Medtr0590s0020 Medicago truncatula HOM05D007003 ORTHO05D263438 2.7e-08 63.9 91 35.2
CAN.G417.4 Capsicum annuum HOM05D007273 ORTHO05D009230 9.6e-06 55.5 93 32.3


User provided reference genes

Program Settings