Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_578.g15951 Utricularia gibba HOM05D006222 ORTHO05D007677 1.2e-144 516.5 272 100.0
SGA_v2.0_scaffold31G12583 Striga asiatica HOM05D006222 ORTHO05D007677 3.7e-61 239.2 290 50.7
SalBow3G0382 Salvia bowleyana HOM05D006222 ORTHO05D007677 1.6e-59 233.8 259 54.8
MSTRG.24605 Avicennia marina HOM05D006222 ORTHO05D007677 2.7e-59 233.0 291 48.8
Sabra14G0113700 Salix brachista HOM05D006222 ORTHO05D007677 2.3e-58 229.9 296 48.3
Oeu034479.1 Olea europaea HOM05D006222 ORTHO05D007677 3.9e-58 229.2 314 49.0
Cc03_g10460 Coffea canephora HOM05D006222 ORTHO05D007677 5.0e-58 228.8 293 51.5
Ciclev10021532m.g Citrus clementina HOM05D006222 ORTHO05D007677 7.3e-57 224.9 219 57.5
GSVIVG01031673001 Vitis vinifera HOM05D006222 ORTHO05D007677 7.3e-57 224.9 250 52.8
CSS0005997 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 6.2e-56 221.9 227 54.6
Duzib268G0300 Durio zibethinus HOM05D006222 ORTHO05D007677 6.2e-56 221.9 236 53.0
CSS0002349 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 1.0e-55 221.1 227 54.6
COL.COLO4_07298 Corchorus olitorius HOM05D006222 ORTHO05D007677 1.8e-55 220.3 230 53.5
Atru.chr3.1674 Acer truncatum HOM05D006222 ORTHO05D007677 2.3e-55 219.9 228 54.8
Cfa008558 Carpinus fangiana HOM05D006222 ORTHO05D007677 4.0e-55 219.2 291 46.4
Duzib212G0460 Durio zibethinus HOM05D006222 ORTHO05D007677 5.2e-55 218.8 217 54.8
Rhsim09G0036800 Rhododendron simsii HOM05D006222 ORTHO05D007677 1.5e-54 217.2 277 49.1
RcHm_v2.0_Chr4g0409281 Rosa chinensis HOM05D006222 ORTHO05D007677 5.8e-54 215.3 237 51.9
Sc07g0007090 Simmondsia chinensis HOM05D006222 ORTHO05D007677 7.5e-54 214.9 279 47.7
Prupe.1G180600 Prunus persica HOM05D006222 ORTHO05D007677 1.7e-53 213.8 304 46.7
TWI63G0082 Tripterygium wilfordii HOM05D006222 ORTHO05D007677 1.7e-53 213.8 302 46.7
Manes.11G113101 Manihot esculenta HOM05D006222 ORTHO05D007677 3.7e-53 212.6 231 51.5
MD04G1034000 Malus domestica HOM05D006222 ORTHO05D007677 6.4e-53 211.8 234 53.0
CANSAT78G1479 Cannabis sativa HOM05D006222 ORTHO05D007677 1.1e-52 211.1 290 45.5
Gohir.A10G136100 Gossypium hirsutum HOM05D006222 ORTHO05D007677 1.1e-52 211.1 233 51.1
BraA05t19346Z Brassica rapa HOM05D006222 ORTHO05D007677 1.9e-52 210.3 233 50.6
Migut.N00436 Erythranthe guttata HOM05D006222 ORTHO05D007677 1.9e-52 210.3 311 44.4
PGR083G0744 Punica granatum HOM05D006222 ORTHO05D007677 2.4e-52 209.9 288 44.8
PGSC0003DMG400013073 Solanum tuberosum HOM05D006222 ORTHO05D007677 2.4e-52 209.9 250 50.4
Aqoxy5G00038 Aquilegia oxysepala HOM05D006222 ORTHO05D007677 3.2e-52 209.5 225 52.0
Hma1.2p1_1477F.1_g285900 Hydrangea macrophylla HOM05D006222 ORTHO05D007677 3.2e-52 209.5 169 63.9
EL10Ac5g11641 Beta vulgaris HOM05D006222 ORTHO05D007677 4.1e-52 209.1 269 45.7
Thhalv10017033m.g Eutrema salsugineum HOM05D006222 ORTHO05D007677 4.1e-52 209.1 233 51.1
Gohir.D10G130500 Gossypium hirsutum HOM05D006222 ORTHO05D007677 5.4e-52 208.8 233 50.6
Gorai.011G144300 Gossypium raimondii HOM05D006222 ORTHO05D007677 5.4e-52 208.8 233 50.6
Thecc.04G181000 Theobroma cacao HOM05D006222 ORTHO05D007677 7.0e-52 208.4 236 50.4
FvH4_4g11840 Fragaria vesca HOM05D006222 ORTHO05D007677 9.2e-52 208.0 289 45.3
CiPaw.02G058300 Carya illinoinensis HOM05D006222 ORTHO05D007677 1.2e-51 207.6 290 45.5
TAR362G1090 Trochodendron aralioides HOM05D006222 ORTHO05D007677 1.2e-51 207.6 252 49.2
Ah.12g060860 Amaranthus hybridus HOM05D006222 ORTHO05D007677 1.6e-51 207.2 251 47.8
Ah.12g062130 Amaranthus hybridus HOM05D006222 ORTHO05D007677 2.7e-51 206.5 274 43.8
BcaC02g12413 Brassica carinata HOM05D006222 ORTHO05D007677 4.6e-51 205.7 280 44.6
FAN12G2296 Fragaria x ananassa HOM05D006222 ORTHO05D007677 7.8e-51 204.9 289 45.0
Sed0019288 Sechium edule HOM05D006222 ORTHO05D007677 7.8e-51 204.9 225 50.2
Sp4g25240 Schrenkiella parvula HOM05D006222 ORTHO05D007677 1.0e-50 204.5 281 46.3
C04p04200 Brassica napus HOM05D006222 ORTHO05D007677 1.3e-50 204.1 284 45.4
BolC4t22057H Brassica oleracea HOM05D006222 ORTHO05D007677 1.3e-50 204.1 284 45.4
ClCG07G016700 Citrullus lanatus HOM05D006222 ORTHO05D007677 1.7e-50 203.8 242 48.3
FAN12G2611 Fragaria x ananassa HOM05D006222 ORTHO05D007677 3.9e-50 202.6 303 43.2
Lj3P863T15 Lonicera japonica HOM05D006222 ORTHO05D007677 3.9e-50 202.6 231 50.6
A05p03600 Brassica napus HOM05D006222 ORTHO05D007677 5.0e-50 202.2 286 44.4
Actinidia32943 Actinidia chinensis HOM05D006222 ORTHO05D007677 6.6e-50 201.8 174 60.3
Carub.0004s2559 Capsella rubella HOM05D006222 ORTHO05D007677 1.1e-49 201.1 302 43.7
MELO3C017672.2 Cucumis melo HOM05D006222 ORTHO05D007677 1.1e-49 201.1 240 48.3
Eucgr.A00219 Eucalyptus grandis HOM05D006222 ORTHO05D007677 1.1e-49 201.1 300 44.0
CsaV3_4G003830 Cucumis sativus L. HOM05D006222 ORTHO05D007677 1.5e-49 200.7 282 44.3
FAN17G0755 Fragaria x ananassa HOM05D006222 ORTHO05D007677 1.5e-49 200.7 253 47.8
HanXRQChr14g0432081 Helianthus annuus HOM05D006222 ORTHO05D007677 1.9e-49 200.3 229 50.2
DCAR_027540 Daucus carota HOM05D006222 ORTHO05D007677 2.5e-49 199.9 285 45.3
AL4G41770 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 5.6e-49 198.7 229 48.5
Aa31LG1G24920 Aethionema arabicum HOM05D006222 ORTHO05D007677 7.3e-49 198.4 306 42.2
AL401U10010 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 9.5e-49 198.0 229 48.5
PSO357G0657 Papaver somniferum HOM05D006222 ORTHO05D007677 9.5e-49 198.0 287 45.3
AT2G43110 Arabidopsis thaliana HOM05D006222 ORTHO05D007677 1.2e-48 197.6 230 47.8
Lalb_Chr06g0164621 Lupinus albus HOM05D006222 ORTHO05D007677 1.2e-48 197.6 268 45.9
CDE05G0624 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 4.7e-48 195.7 226 48.7
BcaNung03540 Brassica carinata HOM05D006222 ORTHO05D007677 6.2e-48 195.3 297 43.8
CAN.G1310.8 Capsicum annuum HOM05D006222 ORTHO05D007677 1.4e-47 194.1 170 60.0
THA.LOC104804896 Tarenaya hassleriana HOM05D006222 ORTHO05D007677 1.4e-47 194.1 263 44.9
CDE05G2371 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 2.3e-47 193.4 261 44.4
PSO170G0570 Papaver somniferum HOM05D006222 ORTHO05D007677 3.1e-47 193.0 287 44.6
Peaxi162Scf00423g00727 Petunia axillaris HOM05D006222 ORTHO05D007677 4.0e-47 192.6 166 60.8
Sopen05g032350 Solanum pennellii HOM05D006222 ORTHO05D007677 4.0e-47 192.6 288 44.1
PGSC0003DMG400023306 Solanum tuberosum HOM05D006222 ORTHO05D007677 5.2e-47 192.2 170 60.6
Medtr1g116820 Medicago truncatula HOM05D006222 ORTHO05D007677 6.8e-47 191.8 236 45.3
Hund13303 Selenicereus undatus HOM05D006222 ORTHO05D007677 6.8e-47 191.8 293 41.3
CARHR138180 Cardamine hirsuta HOM05D006222 ORTHO05D007677 8.9e-47 191.4 288 43.4
arahy.Tifrunner.gnm1.ann1.VRQF1E Arachis hypogaea HOM05D006222 ORTHO05D007677 1.2e-46 191.0 221 48.9
arahy.Tifrunner.gnm1.ann1.S0FJR3 Arachis hypogaea HOM05D006222 ORTHO05D007677 1.3e-45 187.6 223 48.0
Ca_11418_v3 Cicer arietinum L. HOM05D006222 ORTHO05D007677 1.3e-45 187.6 233 46.4
Dinv22662 Davidia involucrata HOM05D006222 ORTHO05D007677 1.7e-45 187.2 204 55.9
ECA232G0640 Erigeron canadensis HOM05D006222 ORTHO05D007677 2.9e-45 186.4 229 47.6
vmacro22720 Vaccinium macrocarpon HOM05D006222 ORTHO05D007677 2.9e-45 186.4 198 56.1
Nn3g20171 Nelumbo nucifera HOM05D006222 ORTHO05D007677 1.4e-44 184.1 219 47.9
Glyma.20G248400 Glycine max HOM05D006222 ORTHO05D007677 7.1e-44 181.8 157 58.6
Potri.014G150100 Populus trichocarpa HOM05D006222 ORTHO05D007677 6.0e-43 178.7 243 47.7
VMungo0720G0284 Vigna mungo HOM05D006222 ORTHO05D007677 3.0e-42 176.4 160 55.0
Lj5g0022978 Lotus japonicus HOM05D006222 ORTHO05D007677 5.1e-42 175.6 231 45.5
Psat0s4086g0080 Pisum sativum HOM05D006222 ORTHO05D007677 2.5e-41 173.3 260 39.6
TPR.G8895 Trifolium pratense HOM05D006222 ORTHO05D007677 5.6e-41 172.2 254 40.9
Phvul.007G002100 Phaseolus vulgaris HOM05D006222 ORTHO05D007677 7.3e-41 171.8 156 55.1
ATR1089G038 Amborella trichopoda HOM05D006222 ORTHO05D007677 9.5e-41 171.4 217 45.6
FvH4_6g25320 Fragaria vesca HOM05D006222 ORTHO05D007677 3.6e-40 169.5 272 40.8
Os04g0348100 Oryza sativa ssp. japonica HOM05D006222 ORTHO05D007677 8.9e-39 164.9 162 52.5
Lsat_1_v5_gn_2_38021 Lactuca sativa HOM05D006222 ORTHO05D007677 8.4e-37 158.3 231 47.2
SMO331G0016 Selaginella moellendorffii HOM05D006222 ORTHO05D007677 8.4e-37 158.3 273 38.5
Solyc05g053880.4 Solanum lycopersicum HOM05D006222 ORTHO05D007677 7.1e-36 155.2 194 50.5
FAN05G2938 Fragaria x ananassa HOM05D006222 ORTHO05D007677 1.5e-33 147.5 143 56.6
Actinidia35881 Actinidia chinensis HOM05D006222 ORTHO05D007677 9.6e-33 144.8 165 49.1
Zm00001eb086320 Zea mays HOM05D006222 ORTHO05D007677 3.1e-31 139.8 137 53.3
AUR62029129 Chenopodium quinoa HOM05D006222 ORTHO05D007677 6.4e-29 132.1 220 37.7
QL10p043792 Quercus lobata HOM05D006222 ORTHO05D007677 8.4e-29 131.7 93 68.8
QL10p047312 Quercus lobata HOM05D006222 ORTHO05D007677 1.9e-28 130.6 93 68.8
Haze_11067 Corylus avellana HOM05D006222 ORTHO05D007677 9.3e-28 128.3 94 66.0
Mapoly0037s0098 Marchantia polymorpha HOM05D006222 ORTHO05D007677 4.6e-27 125.9 142 42.3
CSS0048231 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 9.6e-25 118.2 91 63.7
Nitab4.5_0000161g0130 Nicotiana tabacum HOM05D006222 ORTHO05D007677 1.1e-23 114.8 236 35.2
RhsimUnG0147000 Rhododendron simsii HOM05D006222 ORTHO05D007677 5.3e-23 112.5 240 38.8
Rhsim04G0094000 Rhododendron simsii HOM05D006222 ORTHO05D007677 9.0e-23 111.7 269 36.4
QL10p043789 Quercus lobata HOM05D006222 ORTHO05D007677 4.5e-22 109.4 126 50.8
AUR62014992 Chenopodium quinoa HOM05D006222 ORTHO05D007677 9.9e-22 108.2 163 38.7
Pp3c6_17250 Physcomitrium patens HOM05D006222 ORTHO05D007677 9.9e-22 108.2 282 30.1
HPP92_024563 Vanilla planifolia HOM05D006222 ORTHO05D007677 9.9e-22 108.2 267 32.2
Nitab4.5_0007578g0020 Nicotiana tabacum HOM05D006222 ORTHO05D007677 1.3e-21 107.8 223 34.1
CBR_g19109 Chara braunii HOM05D006222 ORTHO05D007677 3.8e-21 106.3 145 39.3
Eucgr.L00544 Eucalyptus grandis HOM05D006222 ORTHO05D007677 3.5e-19 99.8 124 47.6
QL10p047309 Quercus lobata HOM05D006222 ORTHO05D007677 3.0e-18 96.7 181 39.8
MD13G1276400 Malus domestica HOM05D006222 ORTHO05D007677 1.6e-16 90.9 146 41.1
Ah.12g060290 Amaranthus hybridus HOM05D006222 ORTHO05D007677 1.4e-15 87.8 66 60.6
Actinidia27187 Actinidia chinensis HOM05D006222 ORTHO05D007677 3.1e-15 86.7 202 40.6
Haze_11066 Corylus avellana HOM05D006222 ORTHO05D007677 3.0e-10 70.1 157 36.3
Duzib268G0844 Durio zibethinus HOM05D006222 ORTHO05D007677 5.6e-09 65.9 97 42.3
A03p23980 Brassica napus HOM05D006222 ORTHO05D007677 5.8e-06 55.8 52 53.8


User provided reference genes

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