Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_578.g15927 Utricularia gibba HOM05D003644 ORTHO05D004305 3.5e-61 238.0 115 100.0
MSTRG.6013 Avicennia marina HOM05D003644 ORTHO05D004305 1.8e-17 92.8 132 43.9
unitig_8.g4489 Utricularia gibba HOM05D003644 ORTHO05D004305 3.1e-17 92.0 125 48.0
DCAR_012057 Daucus carota HOM05D003644 ORTHO05D004305 2.0e-16 89.4 124 42.7
Oeu002262.2 Olea europaea HOM05D003644 ORTHO05D004305 3.8e-15 85.1 131 42.0
Oeu015581.1 Olea europaea HOM05D003644 ORTHO05D004305 1.1e-14 83.6 131 41.2
PGSC0003DMG400003139 Solanum tuberosum HOM05D003644 ORTHO05D004305 1.4e-14 83.2 103 45.6
Dinv41640 Davidia involucrata HOM05D003644 ORTHO05D004305 1.9e-14 82.8 118 42.4
MSTRG.19571 Avicennia marina HOM05D003644 ORTHO05D004305 1.6e-13 79.7 131 41.2
CSS0010496 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 1.6e-13 79.7 137 39.4
CSS0033414 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 1.6e-13 79.7 137 39.4
Lj2g0017641 Lotus japonicus HOM05D003644 ORTHO05D004305 6.1e-13 77.8 126 39.7
SalBow6G0047 Salvia bowleyana HOM05D003644 ORTHO05D004305 6.1e-13 77.8 101 44.6
Medtr6g088280 Medicago truncatula HOM05D003644 ORTHO05D004305 7.9e-13 77.4 125 43.2
GSVIVG01015346001 Vitis vinifera HOM05D003644 ORTHO05D004305 1.0e-12 77.0 129 36.4
Duzib150G1566 Durio zibethinus HOM05D003644 ORTHO05D004305 1.8e-12 76.3 104 49.0
Psat1g044920 Pisum sativum HOM05D003644 ORTHO05D004305 2.3e-12 75.9 128 41.4
Glyma.09G193400 Glycine max HOM05D003644 ORTHO05D004305 8.8e-12 73.9 108 44.4
TAR636G2793 Trochodendron aralioides HOM05D003644 ORTHO05D004305 8.8e-12 73.9 122 38.5
Manes.16G112500 Manihot esculenta HOM05D003644 ORTHO05D004305 2.5e-11 72.4 119 42.0
PGSC0003DMG400000374 Solanum tuberosum HOM05D003644 ORTHO05D004305 2.5e-11 72.4 129 38.8
Migut.K00491 Erythranthe guttata HOM05D003644 ORTHO05D004305 3.3e-11 72.0 87 44.8
MBI04_g14930_MAGBIO Magnolia biondii HOM05D003644 ORTHO05D004305 4.3e-11 71.6 116 40.5
ECA234G2378 Erigeron canadensis HOM05D003644 ORTHO05D004305 5.7e-11 71.2 108 39.8
Lsat_1_v5_gn_8_96040 Lactuca sativa HOM05D003644 ORTHO05D004305 5.7e-11 71.2 105 40.0
Sopen07g007520 Solanum pennellii HOM05D003644 ORTHO05D004305 5.7e-11 71.2 113 40.7
TPR.G34913 Trifolium pratense HOM05D003644 ORTHO05D004305 5.7e-11 71.2 124 39.5
CiPaw.03G227900 Carya illinoinensis HOM05D003644 ORTHO05D004305 9.7e-11 70.5 122 39.3
Manes.03G024200 Manihot esculenta HOM05D003644 ORTHO05D004305 9.7e-11 70.5 125 40.0
Duzib168G0231 Durio zibethinus HOM05D003644 ORTHO05D004305 1.3e-10 70.1 124 41.1
Thecc.09G105500 Theobroma cacao HOM05D003644 ORTHO05D004305 1.3e-10 70.1 130 39.2
BcaC06g32601 Brassica carinata HOM05D003644 ORTHO05D004305 2.2e-10 69.3 119 41.2
Sopen12g003210 Solanum pennellii HOM05D003644 ORTHO05D004305 3.7e-10 68.6 127 38.6
TAR624G1421 Trochodendron aralioides HOM05D003644 ORTHO05D004305 3.7e-10 68.6 121 38.0
BcaC06g36690 Brassica carinata HOM05D003644 ORTHO05D004305 6.3e-10 67.8 86 47.7
BcaNung01359 Brassica carinata HOM05D003644 ORTHO05D004305 6.3e-10 67.8 84 48.8
BolC7t40541H Brassica oleracea HOM05D003644 ORTHO05D004305 6.3e-10 67.8 86 47.7
AUR62010940 Chenopodium quinoa HOM05D003644 ORTHO05D004305 6.3e-10 67.8 103 42.7
Gohir.D06G063400 Gossypium hirsutum HOM05D003644 ORTHO05D004305 6.3e-10 67.8 132 38.6
Gorai.010G073900 Gossypium raimondii HOM05D003644 ORTHO05D004305 6.3e-10 67.8 132 38.6
Gohir.A06G064800 Gossypium hirsutum HOM05D003644 ORTHO05D004305 8.2e-10 67.4 132 38.6
CAN.G1774.6 Capsicum annuum HOM05D003644 ORTHO05D004305 1.1e-09 67.0 97 41.2
Potri.006G161100 Populus trichocarpa HOM05D003644 ORTHO05D004305 1.1e-09 67.0 111 38.7
RcHm_v2.0_Chr2g0091291 Rosa chinensis HOM05D003644 ORTHO05D004305 1.1e-09 67.0 102 42.2
THA.LOC104814562 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 1.4e-09 66.6 141 33.3
A07p00580 Brassica napus HOM05D003644 ORTHO05D004305 1.8e-09 66.2 86 46.5
BraA07t27854Z Brassica rapa HOM05D003644 ORTHO05D004305 1.8e-09 66.2 86 46.5
VMungo0251G1747 Vigna mungo HOM05D003644 ORTHO05D004305 1.8e-09 66.2 111 38.7
Nn2g11654 Nelumbo nucifera HOM05D003644 ORTHO05D004305 2.4e-09 65.9 82 47.6
arahy.Tifrunner.gnm1.ann1.X7P2RE Arachis hypogaea HOM05D003644 ORTHO05D004305 3.1e-09 65.5 145 34.5
BcaB03g16807 Brassica carinata HOM05D003644 ORTHO05D004305 4.1e-09 65.1 72 54.2
A03p58450 Brassica napus HOM05D003644 ORTHO05D004305 4.1e-09 65.1 114 39.5
C07p56470 Brassica napus HOM05D003644 ORTHO05D004305 4.1e-09 65.1 114 39.5
BolC7t46126H Brassica oleracea HOM05D003644 ORTHO05D004305 4.1e-09 65.1 114 39.5
Peaxi162Scf00231g00061 Petunia axillaris HOM05D003644 ORTHO05D004305 4.1e-09 65.1 118 40.7
Phvul.002G311400 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 4.1e-09 65.1 126 38.1
A01p09070 Brassica napus HOM05D003644 ORTHO05D004305 5.3e-09 64.7 116 39.7
C07p01040 Brassica napus HOM05D003644 ORTHO05D004305 5.3e-09 64.7 86 46.5
Haze_25785 Corylus avellana HOM05D003644 ORTHO05D004305 5.3e-09 64.7 132 36.4
FAN26G0903 Fragaria x ananassa HOM05D003644 ORTHO05D004305 6.9e-09 64.3 98 42.9
FAN26G3023 Fragaria x ananassa HOM05D003644 ORTHO05D004305 6.9e-09 64.3 98 42.9
Glyma.05G229100 Glycine max HOM05D003644 ORTHO05D004305 6.9e-09 64.3 119 38.7
Lalb_Chr16g0388081 Lupinus albus HOM05D003644 ORTHO05D004305 6.9e-09 64.3 80 46.2
MD02G1057600 Malus domestica HOM05D003644 ORTHO05D004305 9.1e-09 63.9 101 42.6
C01p10620 Brassica napus HOM05D003644 ORTHO05D004305 1.2e-08 63.5 95 43.2
BraA01t00855Z Brassica rapa HOM05D003644 ORTHO05D004305 1.2e-08 63.5 95 43.2
Cpa.g.sc23.57 Carica papaya HOM05D003644 ORTHO05D004305 1.2e-08 63.5 123 38.2
FAN28G1311 Fragaria x ananassa HOM05D003644 ORTHO05D004305 1.2e-08 63.5 124 37.1
Nn3g18137 Nelumbo nucifera HOM05D003644 ORTHO05D004305 1.2e-08 63.5 123 37.4
FvH4_1g05660 Fragaria vesca HOM05D003644 ORTHO05D004305 1.5e-08 63.2 126 38.1
arahy.Tifrunner.gnm1.ann1.TDG8V6 Arachis hypogaea HOM05D003644 ORTHO05D004305 2.0e-08 62.8 146 36.3
A09p59020 Brassica napus HOM05D003644 ORTHO05D004305 2.0e-08 62.8 86 44.2
BraA09t41288Z Brassica rapa HOM05D003644 ORTHO05D004305 2.0e-08 62.8 86 44.2
CSS0008241 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 2.0e-08 62.8 126 36.5
CARHR110580 Cardamine hirsuta HOM05D003644 ORTHO05D004305 2.0e-08 62.8 111 39.6
FAN19G0617 Fragaria x ananassa HOM05D003644 ORTHO05D004305 2.0e-08 62.8 126 38.1
VMungo0464G0020 Vigna mungo HOM05D003644 ORTHO05D004305 2.0e-08 62.8 99 41.4
Atru.chr7.1390 Acer truncatum HOM05D003644 ORTHO05D004305 2.6e-08 62.4 109 39.4
Prupe.7G225200 Prunus persica HOM05D003644 ORTHO05D004305 2.6e-08 62.4 112 39.3
BolC1t01024H Brassica oleracea HOM05D003644 ORTHO05D004305 3.4e-08 62.0 95 43.2
Ciclev10010512m.g Citrus clementina HOM05D003644 ORTHO05D004305 3.4e-08 62.0 131 36.6
Sabra18G0072500 Salix brachista HOM05D003644 ORTHO05D004305 3.4e-08 62.0 78 46.2
BcaC09g51666 Brassica carinata HOM05D003644 ORTHO05D004305 4.5e-08 61.6 83 45.8
BcaC07g41224 Brassica carinata HOM05D003644 ORTHO05D004305 7.7e-08 60.8 86 44.2
Duzib187G1156 Durio zibethinus HOM05D003644 ORTHO05D004305 7.7e-08 60.8 86 46.5
Peaxi162Scf00665g00003 Petunia axillaris HOM05D003644 ORTHO05D004305 7.7e-08 60.8 120 37.5
Phvul.004G168350 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 7.7e-08 60.8 98 40.8
Actinidia20403 Actinidia chinensis HOM05D003644 ORTHO05D004305 1.0e-07 60.5 86 40.7
AL3G48010 Arabidopsis lyrata HOM05D003644 ORTHO05D004305 1.0e-07 60.5 88 42.0
DCAR_010477 Daucus carota HOM05D003644 ORTHO05D004305 1.0e-07 60.5 111 41.4
FAN23G2152 Fragaria x ananassa HOM05D003644 ORTHO05D004305 1.0e-07 60.5 94 42.6
Thhalv10002311m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 1.3e-07 60.1 88 42.0
Sc18g0001380 Simmondsia chinensis HOM05D003644 ORTHO05D004305 1.3e-07 60.1 128 34.4
BcaB08g34898 Brassica carinata HOM05D003644 ORTHO05D004305 1.7e-07 59.7 90 43.3
BcaC07g41225 Brassica carinata HOM05D003644 ORTHO05D004305 1.7e-07 59.7 90 43.3
C08p42300 Brassica napus HOM05D003644 ORTHO05D004305 1.7e-07 59.7 86 43.0
BolC8t51790H Brassica oleracea HOM05D003644 ORTHO05D004305 1.7e-07 59.7 86 43.0
Carub.0007s1180 Capsella rubella HOM05D003644 ORTHO05D004305 1.7e-07 59.7 90 42.2
ClCG06G008860 Citrullus lanatus HOM05D003644 ORTHO05D004305 1.7e-07 59.7 102 35.3
MD15G1192000 Malus domestica HOM05D003644 ORTHO05D004305 1.7e-07 59.7 127 36.2
Potri.018G084100 Populus trichocarpa HOM05D003644 ORTHO05D004305 2.2e-07 59.3 66 51.5
PGR142G1369 Punica granatum HOM05D003644 ORTHO05D004305 2.2e-07 59.3 79 46.8
QL02p044635 Quercus lobata HOM05D003644 ORTHO05D004305 2.2e-07 59.3 129 35.7
BraA09t36915Z Brassica rapa HOM05D003644 ORTHO05D004305 2.9e-07 58.9 99 39.4
Lsat_1_v5_gn_5_147641 Lactuca sativa HOM05D003644 ORTHO05D004305 2.9e-07 58.9 95 38.9
Sp3g33380 Schrenkiella parvula HOM05D003644 ORTHO05D004305 2.9e-07 58.9 88 40.9
Actinidia09436 Actinidia chinensis HOM05D003644 ORTHO05D004305 3.8e-07 58.5 79 40.5
BcaB03g16801 Brassica carinata HOM05D003644 ORTHO05D004305 3.8e-07 58.5 54 57.4
Carub.0003s3436 Capsella rubella HOM05D003644 ORTHO05D004305 3.8e-07 58.5 102 38.2
TWI32G0193 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 3.8e-07 58.5 129 34.1
Thhalv10026355m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 5.0e-07 58.2 74 50.0
BcaC04g22808 Brassica carinata HOM05D003644 ORTHO05D004305 6.5e-07 57.8 67 47.8
BcaNung04091 Brassica carinata HOM05D003644 ORTHO05D004305 6.5e-07 57.8 71 46.5
C09p15050 Brassica napus HOM05D003644 ORTHO05D004305 6.5e-07 57.8 67 47.8
BolC9t54408H Brassica oleracea HOM05D003644 ORTHO05D004305 6.5e-07 57.8 67 47.8
Cc06_g10070 Coffea canephora HOM05D003644 ORTHO05D004305 6.5e-07 57.8 124 37.9
Glyma.01G145600 Glycine max HOM05D003644 ORTHO05D004305 6.5e-07 57.8 99 40.4
Gohir.D07G007600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 6.5e-07 57.8 82 46.3
Gorai.001G007300 Gossypium raimondii HOM05D003644 ORTHO05D004305 6.5e-07 57.8 82 46.3
HanXRQChr12g0358181 Helianthus annuus HOM05D003644 ORTHO05D004305 6.5e-07 57.8 40 65.0
Lalb_Chr22g0352641 Lupinus albus HOM05D003644 ORTHO05D004305 6.5e-07 57.8 102 40.2
A09p12690 Brassica napus HOM05D003644 ORTHO05D004305 8.5e-07 57.4 67 47.8
AT2G20080 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 1.1e-06 57.0 43 60.5
Gohir.A07G004600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.1e-06 57.0 55 61.8
Aa31LG8G17030 Aethionema arabicum HOM05D003644 ORTHO05D004305 1.9e-06 56.2 61 50.8
Aqoxy7G01525 Aquilegia oxysepala HOM05D003644 ORTHO05D004305 2.5e-06 55.8 80 40.0
CANSAT56G0200 Cannabis sativa HOM05D003644 ORTHO05D004305 2.5e-06 55.8 122 34.4
Glyma.08G036100 Glycine max HOM05D003644 ORTHO05D004305 2.5e-06 55.8 121 40.5
TWI34G1832 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 2.5e-06 55.8 112 35.7
Oeu018442.1 Olea europaea HOM05D003644 ORTHO05D004305 3.2e-06 55.5 95 43.2
Aa31LG2G21540 Aethionema arabicum HOM05D003644 ORTHO05D004305 5.5e-06 54.7 48 54.2
Os05g0559316 Oryza sativa ssp. japonica HOM05D003644 ORTHO05D004305 7.2e-06 54.3 84 42.9
Sc08g0007690 Simmondsia chinensis HOM05D003644 ORTHO05D004305 7.2e-06 54.3 122 31.1


User provided reference genes

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