Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_578.g15900 Utricularia gibba HOM05D002100 ORTHO05D034827 6.5e-67 257.3 133 100.0
Oeu038756.1 Olea europaea HOM05D002100 ORTHO05D002310 2.0e-12 76.3 127 43.3
Oeu028413.2 Olea europaea HOM05D002100 ORTHO05D002310 1.0e-11 73.9 122 42.6
MSTRG.10210 Avicennia marina HOM05D002100 ORTHO05D002310 3.9e-11 72.0 117 41.9
Cc06_g01130 Coffea canephora HOM05D002100 ORTHO05D002310 5.6e-10 68.2 123 39.0
TAR369G1037 Trochodendron aralioides HOM05D002100 ORTHO05D002310 5.6e-10 68.2 127 40.9
CiPaw.09G211200 Carya illinoinensis HOM05D002100 ORTHO05D002310 9.5e-10 67.4 123 39.8
SGA_v2.0_scaffold240G44082 Striga asiatica HOM05D002100 ORTHO05D002310 9.5e-10 67.4 82 51.2
MSTRG.26820 Avicennia marina HOM05D002100 ORTHO05D002310 1.6e-09 66.6 126 40.5
CSS0012400 Camellia sinensis var. sinensis HOM05D002100 ORTHO05D002310 1.6e-09 66.6 122 37.7
Duzib093G1500 Durio zibethinus HOM05D002100 ORTHO05D002310 1.6e-09 66.6 119 41.2
Potri.006G102000 Populus trichocarpa HOM05D002100 ORTHO05D002310 1.6e-09 66.6 116 42.2
Prupe.6G280000 Prunus persica HOM05D002100 ORTHO05D002310 2.1e-09 66.2 120 40.0
Duzib106G1491 Durio zibethinus HOM05D002100 ORTHO05D002310 3.6e-09 65.5 132 38.6
unitig_37.g12654 Utricularia gibba HOM05D002100 ORTHO05D002310 4.7e-09 65.1 127 40.2
vmacro08886 Vaccinium macrocarpon HOM05D002100 ORTHO05D002310 8.0e-09 64.3 130 37.7
TAR633G0418 Trochodendron aralioides HOM05D002100 ORTHO05D002310 1.0e-08 63.9 127 40.2
AUR62030813 Chenopodium quinoa HOM05D002100 ORTHO05D002310 1.4e-08 63.5 122 42.6
Dinv13160 Davidia involucrata HOM05D002100 ORTHO05D002310 1.4e-08 63.5 124 37.1
QL07p035112 Quercus lobata HOM05D002100 ORTHO05D002310 1.4e-08 63.5 129 37.2
Migut.J00142 Erythranthe guttata HOM05D002100 ORTHO05D002310 1.8e-08 63.2 51 64.7
Cpa.g.sc11.84 Carica papaya HOM05D002100 ORTHO05D002310 2.3e-08 62.8 95 44.2
PGR031G1388 Punica granatum HOM05D002100 ORTHO05D002310 5.2e-08 61.6 119 37.0
Lsat_1_v5_gn_9_35140 Lactuca sativa HOM05D002100 ORTHO05D002310 6.8e-08 61.2 121 39.7
Sabra06G0078300 Salix brachista HOM05D002100 ORTHO05D002310 6.8e-08 61.2 122 38.5
Sabra16G0115200 Salix brachista HOM05D002100 ORTHO05D002310 6.8e-08 61.2 131 40.5
Sopen09g007630 Solanum pennellii HOM05D002100 ORTHO05D002310 6.8e-08 61.2 123 39.0
EL10Ac5g12541 Beta vulgaris HOM05D002100 ORTHO05D002310 8.9e-08 60.8 101 45.5
Gohir.A04G092600 Gossypium hirsutum HOM05D002100 ORTHO05D002310 8.9e-08 60.8 123 39.0
Ciclev10011058m.g Citrus clementina HOM05D002100 ORTHO05D002310 1.2e-07 60.5 124 39.5
Ah.12g058790 Amaranthus hybridus HOM05D002100 ORTHO05D002310 1.5e-07 60.1 97 41.2
AUR62030481 Chenopodium quinoa HOM05D002100 ORTHO05D002310 1.5e-07 60.1 121 41.3
Haze_21024 Corylus avellana HOM05D002100 ORTHO05D002310 1.5e-07 60.1 122 38.5
Solyc09g014770.3 Solanum lycopersicum HOM05D002100 ORTHO05D002310 2.0e-07 59.7 123 38.2
GSVIVG01011185001 Vitis vinifera HOM05D002100 ORTHO05D002310 2.0e-07 59.7 127 37.8
Thecc.05G013200 Theobroma cacao HOM05D002100 ORTHO05D002310 2.6e-07 59.3 123 38.2
Eucgr.A00534 Eucalyptus grandis HOM05D002100 ORTHO05D002310 4.4e-07 58.5 43 69.8
Hund14872 Selenicereus undatus HOM05D002100 ORTHO05D002310 4.4e-07 58.5 89 44.9
Duzib128G2033 Durio zibethinus HOM05D002100 ORTHO05D002310 5.8e-07 58.2 120 35.0
Gohir.D04G131900 Gossypium hirsutum HOM05D002100 ORTHO05D002310 5.8e-07 58.2 122 38.5
Gorai.012G115700 Gossypium raimondii HOM05D002100 ORTHO05D002310 5.8e-07 58.2 122 38.5
PGSC0003DMG400008496 Solanum tuberosum HOM05D002100 ORTHO05D002310 7.5e-07 57.8 128 38.3
Ah.02g115630 Amaranthus hybridus HOM05D002100 ORTHO05D002310 9.8e-07 57.4 102 40.2
CSS0017895 Camellia sinensis var. sinensis HOM05D002100 ORTHO05D002310 9.8e-07 57.4 82 46.3
CSS0031024 Camellia sinensis var. sinensis HOM05D002100 ORTHO05D002310 9.8e-07 57.4 82 46.3
CDE08G1256 Ceratophyllum demersum HOM05D002100 ORTHO05D002310 9.8e-07 57.4 111 39.6
ClCG04G006930 Citrullus lanatus HOM05D002100 ORTHO05D002310 9.8e-07 57.4 128 39.8
Sed0010553 Sechium edule HOM05D002100 ORTHO05D002310 9.8e-07 57.4 122 36.9
MD12G1171800 Malus domestica HOM05D002100 ORTHO05D002310 1.3e-06 57.0 118 37.3
Potri.016G119300 Populus trichocarpa HOM05D002100 ORTHO05D002310 1.3e-06 57.0 127 37.0
Rhsim04G0126600 Rhododendron simsii HOM05D002100 ORTHO05D002310 1.3e-06 57.0 129 36.4
Sc01g0006900 Simmondsia chinensis HOM05D002100 ORTHO05D002310 1.3e-06 57.0 75 49.3
HanXRQChr10g0294081 Helianthus annuus HOM05D002100 ORTHO05D002310 1.7e-06 56.6 100 41.0
THA.LOC104823377 Tarenaya hassleriana HOM05D002100 ORTHO05D002310 1.7e-06 56.6 93 43.0
TWI74G0675 Tripterygium wilfordii HOM05D002100 ORTHO05D002310 1.7e-06 56.6 60 51.7
Glyma.01G119500 Glycine max HOM05D002100 ORTHO05D002310 2.2e-06 56.2 115 38.3
PSO339G2369 Papaver somniferum HOM05D002100 ORTHO05D002310 2.2e-06 56.2 50 56.0
PSO384G0317 Papaver somniferum HOM05D002100 ORTHO05D002310 2.2e-06 56.2 50 56.0
MELO3C025998.2 Cucumis melo HOM05D002100 ORTHO05D002310 2.9e-06 55.8 129 38.0
CsaV3_4G026330 Cucumis sativus L. HOM05D002100 ORTHO05D002310 2.9e-06 55.8 129 38.0
Manes.09G107100 Manihot esculenta HOM05D002100 ORTHO05D002310 2.9e-06 55.8 124 37.9
Atru.chr8.2268 Acer truncatum HOM05D002100 ORTHO05D002310 3.7e-06 55.5 127 37.0
Dinv01712 Davidia involucrata HOM05D002100 ORTHO05D002310 3.7e-06 55.5 86 45.3
arahy.Tifrunner.gnm1.ann1.W35S2M Arachis hypogaea HOM05D002100 ORTHO05D002310 4.9e-06 55.1 90 42.2
HanXRQChr13g0406591 Helianthus annuus HOM05D002100 ORTHO05D002310 4.9e-06 55.1 48 56.2
TWI53G0714 Tripterygium wilfordii HOM05D002100 ORTHO05D002310 4.9e-06 55.1 122 35.2
Aqoxy2G00848 Aquilegia oxysepala HOM05D002100 ORTHO05D002310 6.4e-06 54.7 76 43.4
Migut.L02027 Erythranthe guttata HOM05D002100 ORTHO05D002310 6.4e-06 54.7 80 51.2
Gohir.D09G161800 Gossypium hirsutum HOM05D002100 ORTHO05D002310 6.4e-06 54.7 123 39.8
MBI16_g08501_MAGBIO Magnolia biondii HOM05D002100 ORTHO05D002310 6.4e-06 54.7 56 50.0
Nitab4.5_0000261g0090 Nicotiana tabacum HOM05D002100 ORTHO05D002310 6.4e-06 54.7 85 42.4
arahy.Tifrunner.gnm1.ann1.7LSJ26 Arachis hypogaea HOM05D002100 ORTHO05D002310 8.3e-06 54.3 53 49.1
FvH4_6g11200 Fragaria vesca HOM05D002100 ORTHO05D002310 8.3e-06 54.3 120 35.8
FAN14G5440 Fragaria x ananassa HOM05D002100 ORTHO05D002310 8.3e-06 54.3 120 35.8
SHI12840 Sapria himalayana HOM05D002100 ORTHO05D002310 8.3e-06 54.3 49 55.1


User provided reference genes

Program Settings