Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_578.g15872 Utricularia gibba HOM05D005195 ORTHO05D006088 1.4e-181 639.4 309 100.0
SalBow6G3026 Salvia bowleyana HOM05D005195 ORTHO05D006088 2.0e-103 379.8 334 62.0
MSTRG.19420 Avicennia marina HOM05D005195 ORTHO05D006088 2.6e-103 379.4 334 61.4
MSTRG.26504 Avicennia marina HOM05D005195 ORTHO05D006088 5.7e-98 361.7 331 57.4
TPR.G12689 Trifolium pratense HOM05D005195 ORTHO05D006088 9.0e-96 354.4 222 73.0
Migut.J00869 Erythranthe guttata HOM05D005195 ORTHO05D006088 1.2e-95 354.0 319 57.1
Psat4g019920 Pisum sativum HOM05D005195 ORTHO05D006088 1.2e-95 354.0 222 74.3
Glyma.13G115600 Glycine max HOM05D005195 ORTHO05D006088 1.7e-94 350.1 222 74.8
Oeu010852.1 Olea europaea HOM05D005195 ORTHO05D006088 1.7e-94 350.1 326 58.9
Oeu010853.1 Olea europaea HOM05D005195 ORTHO05D006088 2.2e-94 349.7 326 58.6
Ciclev10008817m.g Citrus clementina HOM05D005195 ORTHO05D006088 5.0e-94 348.6 225 72.9
Medtr4g124450 Medicago truncatula HOM05D005195 ORTHO05D006088 5.0e-94 348.6 242 69.8
TWI34G1666 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 6.5e-94 348.2 235 70.2
Ca_21349_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 1.1e-93 347.4 222 73.0
CiPaw.03G199200 Carya illinoinensis HOM05D005195 ORTHO05D006088 2.5e-93 346.3 278 63.3
Dinv25492 Davidia involucrata HOM05D005195 ORTHO05D006088 3.2e-93 345.9 221 73.8
Glyma.17G044200 Glycine max HOM05D005195 ORTHO05D006088 4.2e-93 345.5 222 73.4
Lj4g0025754 Lotus japonicus HOM05D005195 ORTHO05D006088 5.5e-93 345.1 223 73.1
Nitab4.5_0000055g0120 Nicotiana tabacum HOM05D005195 ORTHO05D006088 7.2e-93 344.7 329 54.4
Lalb_Chr13g0299131 Lupinus albus HOM05D005195 ORTHO05D006088 1.6e-92 343.6 224 72.3
Haze_26081 Corylus avellana HOM05D005195 ORTHO05D006088 2.1e-92 343.2 216 75.5
TAR383G0985 Trochodendron aralioides HOM05D005195 ORTHO05D006088 2.1e-92 343.2 281 63.3
Cc00_g13790 Coffea canephora HOM05D005195 ORTHO05D006088 6.1e-92 341.7 201 78.6
TWI63G0336 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 6.1e-92 341.7 235 68.9
Eucgr.C00758 Eucalyptus grandis HOM05D005195 ORTHO05D006088 7.9e-92 341.3 255 64.7
PGR142G1085 Punica granatum HOM05D005195 ORTHO05D006088 7.9e-92 341.3 276 62.7
Cfa002928 Carpinus fangiana HOM05D005195 ORTHO05D006088 1.0e-91 340.9 224 73.7
Phvul.003G126200 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 1.8e-91 340.1 222 72.1
GSVIVG01014997001 Vitis vinifera HOM05D005195 ORTHO05D006088 1.8e-91 340.1 203 78.8
VMungo1215G2768 Vigna mungo HOM05D005195 ORTHO05D006088 3.0e-91 339.3 222 72.5
Lalb_Chr12g0200391 Lupinus albus HOM05D005195 ORTHO05D006088 3.9e-91 339.0 224 70.1
Nitab4.5_0001114g0020 Nicotiana tabacum HOM05D005195 ORTHO05D006088 3.9e-91 339.0 287 59.2
Sabra06G0166900 Salix brachista HOM05D005195 ORTHO05D006088 5.1e-91 338.6 265 63.0
Lalb_Chr07g0181481 Lupinus albus HOM05D005195 ORTHO05D006088 8.7e-91 337.8 234 70.5
Actinidia39605 Actinidia chinensis HOM05D005195 ORTHO05D006088 1.1e-90 337.4 232 69.8
Duzib150G0538 Durio zibethinus HOM05D005195 ORTHO05D006088 1.1e-90 337.4 208 74.5
Potri.006G216500 Populus trichocarpa HOM05D005195 ORTHO05D006088 1.1e-90 337.4 265 62.6
CSS0045452 Camellia sinensis var. sinensis HOM05D005195 ORTHO05D006088 1.5e-90 337.0 259 64.9
Lj6g0001650 Lotus japonicus HOM05D005195 ORTHO05D006088 1.5e-90 337.0 257 65.4
arahy.Tifrunner.gnm1.ann1.EYB30S Arachis hypogaea HOM05D005195 ORTHO05D006088 2.5e-90 336.3 223 70.4
QL11p003443 Quercus lobata HOM05D005195 ORTHO05D006088 2.5e-90 336.3 211 75.4
Manes.16G088800 Manihot esculenta HOM05D005195 ORTHO05D006088 3.3e-90 335.9 222 70.3
Nn6g35744 Nelumbo nucifera HOM05D005195 ORTHO05D006088 3.3e-90 335.9 226 69.9
Thecc.09G067900 Theobroma cacao HOM05D005195 ORTHO05D006088 3.3e-90 335.9 208 74.5
FAN26G2084 Fragaria x ananassa HOM05D005195 ORTHO05D006088 4.3e-90 335.5 274 62.8
AL7G18430 Arabidopsis lyrata HOM05D005195 ORTHO05D006088 7.4e-90 334.7 263 62.7
CANSAT56G1537 Cannabis sativa HOM05D005195 ORTHO05D006088 7.4e-90 334.7 204 75.0
FAN26G0153 Fragaria x ananassa HOM05D005195 ORTHO05D006088 9.7e-90 334.3 274 62.8
FAN19G0176 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.3e-89 334.0 274 62.4
Gohir.A06G082100 Gossypium hirsutum HOM05D005195 ORTHO05D006088 1.6e-89 333.6 265 62.3
Gohir.D06G081300 Gossypium hirsutum HOM05D005195 ORTHO05D006088 2.2e-89 333.2 247 66.8
PSO421G0417 Papaver somniferum HOM05D005195 ORTHO05D006088 2.2e-89 333.2 213 72.8
Sopen07g006530 Solanum pennellii HOM05D005195 ORTHO05D006088 2.2e-89 333.2 283 58.7
ATR0099G089 Amborella trichopoda HOM05D005195 ORTHO05D006088 2.8e-89 332.8 222 70.7
AT4G33140 Arabidopsis thaliana HOM05D005195 ORTHO05D006088 2.8e-89 332.8 272 61.4
Gorai.010G094600 Gossypium raimondii HOM05D005195 ORTHO05D006088 2.8e-89 332.8 247 66.4
Phvul.009G221900 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 2.8e-89 332.8 220 72.3
Lj7A694G45 Lonicera japonica HOM05D005195 ORTHO05D006088 3.7e-89 332.4 217 72.4
FvH4_1g09650 Fragaria vesca HOM05D005195 ORTHO05D006088 4.8e-89 332.0 274 62.0
Carub.0007s0732 Capsella rubella HOM05D005195 ORTHO05D006088 8.2e-89 331.3 203 74.9
Atru.chr7.1799 Acer truncatum HOM05D005195 ORTHO05D006088 1.1e-88 330.9 225 70.2
EL10Ac8g18946 Beta vulgaris HOM05D005195 ORTHO05D006088 1.1e-88 330.9 278 57.9
Cpa.g.sc82.43 Carica papaya HOM05D005195 ORTHO05D006088 1.8e-88 330.1 282 60.3
Duzib168G1130 Durio zibethinus HOM05D005195 ORTHO05D006088 1.8e-88 330.1 206 73.3
VMungo1309G1826 Vigna mungo HOM05D005195 ORTHO05D006088 1.8e-88 330.1 220 71.8
CAN.G88.12 Capsicum annuum HOM05D005195 ORTHO05D006088 5.3e-88 328.6 229 69.4
MD15G1225300 Malus domestica HOM05D005195 ORTHO05D006088 5.3e-88 328.6 202 73.3
Sc14g0000920 Simmondsia chinensis HOM05D005195 ORTHO05D006088 9.0e-88 327.8 193 78.2
Aa31sc810G10 Aethionema arabicum HOM05D005195 ORTHO05D006088 1.2e-87 327.4 203 74.4
Duzib187G0988 Durio zibethinus HOM05D005195 ORTHO05D006088 1.2e-87 327.4 200 75.0
arahy.Tifrunner.gnm1.ann1.QID06X Arachis hypogaea HOM05D005195 ORTHO05D006088 1.5e-87 327.0 223 69.1
THA.LOC104804446 Tarenaya hassleriana HOM05D005195 ORTHO05D006088 1.5e-87 327.0 212 73.1
BcaNung02154 Brassica carinata HOM05D005195 ORTHO05D006088 2.0e-87 326.6 203 72.9
C07p59500 Brassica napus HOM05D005195 ORTHO05D006088 2.0e-87 326.6 203 72.9
Prupe.7G189700 Prunus persica HOM05D005195 ORTHO05D006088 2.6e-87 326.2 198 75.3
MBI19_g32876_MAGBIO Magnolia biondii HOM05D005195 ORTHO05D006088 4.5e-87 325.5 292 61.0
Hund08917 Selenicereus undatus HOM05D005195 ORTHO05D006088 4.5e-87 325.5 200 75.0
BolC7t46394H Brassica oleracea HOM05D005195 ORTHO05D006088 5.9e-87 325.1 253 62.8
Glyma.09G077400 Glycine max HOM05D005195 ORTHO05D006088 7.7e-87 324.7 220 70.5
BcaC09g52118 Brassica carinata HOM05D005195 ORTHO05D006088 1.0e-86 324.3 219 68.5
MELO3C015557.2 Cucumis melo HOM05D005195 ORTHO05D006088 1.3e-86 323.9 208 72.6
RcHm_v2.0_Chr2g0096491 Rosa chinensis HOM05D005195 ORTHO05D006088 1.3e-86 323.9 243 65.8
Medtr2g044900 Medicago truncatula HOM05D005195 ORTHO05D006088 2.2e-86 323.2 217 71.4
Aqoxy7G00925 Aquilegia oxysepala HOM05D005195 ORTHO05D006088 2.9e-86 322.8 226 68.1
Gohir.D07G017700 Gossypium hirsutum HOM05D005195 ORTHO05D006088 3.8e-86 322.4 208 71.2
C01p05540 Brassica napus HOM05D005195 ORTHO05D006088 5.0e-86 322.0 204 72.5
BolC1t00534H Brassica oleracea HOM05D005195 ORTHO05D006088 5.0e-86 322.0 204 72.5
Thhalv10025620m.g Eutrema salsugineum HOM05D005195 ORTHO05D006088 5.0e-86 322.0 203 71.9
A03p61820 Brassica napus HOM05D005195 ORTHO05D006088 6.5e-86 321.6 291 55.7
BraA03t15220Z Brassica rapa HOM05D005195 ORTHO05D006088 6.5e-86 321.6 291 55.7
ClCG03G014710 Citrullus lanatus HOM05D005195 ORTHO05D006088 6.5e-86 321.6 208 72.1
Gorai.001G018400 Gossypium raimondii HOM05D005195 ORTHO05D006088 6.5e-86 321.6 208 71.2
Psat1g139120 Pisum sativum HOM05D005195 ORTHO05D006088 6.5e-86 321.6 271 59.8
Sp7g30880 Schrenkiella parvula HOM05D005195 ORTHO05D006088 6.5e-86 321.6 203 72.9
TPR.G25386 Trifolium pratense HOM05D005195 ORTHO05D006088 8.5e-86 321.2 209 71.8
A01p05070 Brassica napus HOM05D005195 ORTHO05D006088 1.9e-85 320.1 204 72.1
BraA01t00489Z Brassica rapa HOM05D005195 ORTHO05D006088 7.2e-85 318.2 204 72.1
CsaV3_1G041450 Cucumis sativus L. HOM05D005195 ORTHO05D006088 7.2e-85 318.2 208 71.6
Gohir.A07G017900 Gossypium hirsutum HOM05D005195 ORTHO05D006088 1.2e-84 317.4 215 69.8
Sed0003985 Sechium edule HOM05D005195 ORTHO05D006088 1.6e-84 317.0 209 70.3
Actinidia33513 Actinidia chinensis HOM05D000417 ORTHO05D006088 3.6e-84 315.8 229 67.7
PSO104G0051 Papaver somniferum HOM05D005195 ORTHO05D006088 3.6e-84 315.8 214 69.6
AUR62028337 Chenopodium quinoa HOM05D005195 ORTHO05D006088 6.7e-83 311.6 190 73.7
FAN23G0045 Fragaria x ananassa HOM05D005195 ORTHO05D006088 6.7e-83 311.6 302 55.0
AUR62025326 Chenopodium quinoa HOM05D005195 ORTHO05D006088 8.8e-83 311.2 190 73.7
CDE05G1368 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 2.5e-82 309.7 209 67.5
Oeu055315.1 Olea europaea HOM05D005195 ORTHO05D006088 3.3e-82 309.3 325 54.8
MD02G1105400 Malus domestica HOM05D005195 ORTHO05D006088 4.3e-82 308.9 201 69.7
Os06g0192900 Oryza sativa ssp. japonica HOM05D005195 ORTHO05D006088 1.7e-81 307.0 237 61.6
Zm00001eb374160 Zea mays HOM05D005195 ORTHO05D006088 3.7e-81 305.8 222 64.9
HPP92_002369 Vanilla planifolia HOM05D005195 ORTHO05D006088 1.1e-80 304.3 214 66.4
HPP92_027596 Vanilla planifolia HOM05D005195 ORTHO05D006088 6.9e-80 301.6 243 61.3
CDE07G0654 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 9.1e-80 301.2 200 68.0
HPP92_019108 Vanilla planifolia HOM05D005195 ORTHO05D006088 4.5e-79 298.9 259 56.8
CDE06G1243 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 7.7e-79 298.1 200 67.5
Rhsim05G0001200 Rhododendron simsii HOM05D005195 ORTHO05D006088 2.9e-78 296.2 257 58.0
SHI27969 Sapria himalayana HOM05D005195 ORTHO05D006088 1.1e-77 294.3 203 68.0
SEGI_21946 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 1.8e-72 276.9 202 60.9
Mapoly0181s0009 Marchantia polymorpha HOM05D005195 ORTHO05D006088 2.6e-71 273.1 198 60.6
CARHR241160 Cardamine hirsuta HOM05D005195 ORTHO05D006088 8.5e-70 268.1 161 74.5
Pp3c5_26930 Physcomitrium patens HOM05D005195 ORTHO05D006088 2.5e-69 266.5 195 61.0
Migut.L00513 Erythranthe guttata HOM05D005195 ORTHO05D006088 2.1e-68 263.5 162 72.8
Ca_02313_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 8.2e-65 251.5 159 71.7
vmacro06379 Vaccinium macrocarpon HOM05D005195 ORTHO05D006088 1.7e-62 243.8 225 56.9
Solyc07g017700.3 Solanum lycopersicum HOM05D005195 ORTHO05D006088 2.5e-61 240.0 151 71.5
Cre16.g661550 Chlamydomonas reinhardtii HOM05D005195 ORTHO05D006088 4.2e-61 239.2 220 52.3
DCAR_024788 Daucus carota HOM05D005195 ORTHO05D006088 2.0e-58 230.3 136 77.9
Dinv42438 Davidia involucrata HOM05D005195 ORTHO05D006088 2.6e-58 229.9 144 75.0
Glyma.17G255700 Glycine max HOM05D005195 ORTHO05D006088 5.7e-58 228.8 141 72.3
Peaxi162Scf00452g00117 Petunia axillaris HOM05D005195 ORTHO05D006088 1.4e-48 197.6 122 73.0
EL10Ac7g16303 Beta vulgaris HOM05D005195 ORTHO05D006088 2.3e-43 180.3 148 58.1
RcHm_v2.0_Chr2g0117071 Rosa chinensis HOM05D005195 ORTHO05D006088 2.6e-42 176.8 155 54.8
PRCOL_00003934 Prasinoderma coloniale HOM05D005195 ORTHO05D006088 3.7e-41 172.9 174 46.0
Pp3c6_3390 Physcomitrium patens HOM05D005195 ORTHO05D006088 2.0e-31 140.6 111 57.7
SGA_v2.0_scaffold31G12703 Striga asiatica HOM05D005195 ORTHO05D006088 3.0e-22 110.2 186 40.9
SEGI_31296 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 1.1e-21 108.2 83 55.4
Solyc07g017710.1 Solanum lycopersicum HOM05D005195 ORTHO05D006088 3.4e-18 96.7 131 44.3
Migut.L01605 Erythranthe guttata HOM05D005195 ORTHO05D006088 9.2e-16 88.6 154 39.6
Ca_29779_v3 Cicer arietinum L. HOM05D000417 ORTHO05D000342 8.6e-14 82.0 69 62.3
PGSC0003DMG400002304 Solanum tuberosum HOM05D005195 ORTHO05D006088 1.5e-13 81.3 126 42.1
COL.COLO4_21182 Corchorus olitorius HOM05D005195 ORTHO05D006088 4.3e-13 79.7 76 56.6
Peaxi162Scf00452g00122 Petunia axillaris HOM05D005195 ORTHO05D006088 9.6e-13 78.6 67 62.7
Zm00001eb045610 Zea mays HOM05D005195 ORTHO05D006088 2.7e-07 60.5 43 65.1


User provided reference genes

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