Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_52.g17640 Utricularia gibba HOM05D006007 ORTHO05D007518 2.0e-292 1008.4 546 100.0
MSTRG.23885 Avicennia marina HOM05D006007 ORTHO05D007518 1.4e-163 580.5 559 60.6
Migut.H00628 Erythranthe guttata HOM05D006007 ORTHO05D007518 2.0e-154 550.1 462 66.0
SalBow1G7079 Salvia bowleyana HOM05D006007 ORTHO05D007518 1.7e-150 537.0 453 67.1
Cc07_g04190 Coffea canephora HOM05D006007 ORTHO05D007518 2.0e-138 496.9 574 54.4
CSS0007202 Camellia sinensis var. sinensis HOM05D006007 ORTHO05D007518 1.6e-132 477.2 571 55.2
Oeu004412.3 Olea europaea HOM05D006007 ORTHO05D007518 4.7e-132 475.7 639 52.9
CSS0026219 Camellia sinensis var. sinensis HOM05D006007 ORTHO05D007518 1.1e-131 474.6 575 54.6
Nitab4.5_0000212g0230 Nicotiana tabacum HOM05D006007 ORTHO05D007518 1.1e-131 474.6 569 53.6
Dinv34943 Davidia involucrata HOM05D006007 ORTHO05D007518 8.4e-129 464.9 501 56.5
CAN.G398.20 Capsicum annuum HOM05D006007 ORTHO05D007518 6.2e-124 448.7 568 53.0
Solyc02g066940.4 Solanum lycopersicum HOM05D006007 ORTHO05D007518 4.0e-123 446.0 573 52.9
PGSC0003DMG400025145 Solanum tuberosum HOM05D006007 ORTHO05D007518 1.5e-122 444.1 576 53.0
Peaxi162Scf00991g00329 Petunia axillaris HOM05D006007 ORTHO05D007518 1.7e-121 440.7 463 55.3
Sopen02g016130 Solanum pennellii HOM05D006007 ORTHO05D007518 4.9e-121 439.1 478 55.2
GSVIVG01032902001 Vitis vinifera HOM05D006007 ORTHO05D007518 8.4e-121 438.3 598 52.7
TAR264G0002 Trochodendron aralioides HOM05D006007 ORTHO05D007518 6.7e-118 428.7 606 50.0
Manes.02G054700 Manihot esculenta HOM05D006007 ORTHO05D007518 4.3e-117 426.0 617 48.5
RcHm_v2.0_Chr2g0165881 Rosa chinensis HOM05D006007 ORTHO05D007518 1.5e-114 417.5 591 49.4
Ciclev10011374m.g Citrus clementina HOM05D006007 ORTHO05D007518 3.4e-114 416.4 582 50.0
FAN09G0451 Fragaria x ananassa HOM05D006007 ORTHO05D007518 9.9e-114 414.8 596 47.5
Potri.017G093600 Populus trichocarpa HOM05D006007 ORTHO05D007518 1.3e-113 414.5 589 49.1
Atru.chr8.458 Acer truncatum HOM05D006007 ORTHO05D007518 1.7e-113 414.1 581 49.6
FvH4_6g46910 Fragaria vesca HOM05D006007 ORTHO05D007518 3.8e-113 412.9 597 49.6
HanXRQChr17g0546081 Helianthus annuus HOM05D006007 ORTHO05D007518 1.9e-112 410.6 558 51.8
Gorai.007G082800 Gossypium raimondii HOM05D006007 ORTHO05D007518 3.2e-112 409.8 611 48.6
ECA246G0757 Erigeron canadensis HOM05D006007 ORTHO05D007518 4.2e-112 409.5 557 50.6
Cfa007665 Carpinus fangiana HOM05D006007 ORTHO05D007518 9.3e-112 408.3 595 47.2
FAN05G3222 Fragaria x ananassa HOM05D006007 ORTHO05D007518 6.0e-111 405.6 607 46.8
Sabra17G0082500 Salix brachista HOM05D006007 ORTHO05D007518 6.0e-111 405.6 576 50.2
QL02p067640 Quercus lobata HOM05D006007 ORTHO05D007518 7.9e-111 405.2 616 47.9
Nn4g23426 Nelumbo nucifera HOM05D006007 ORTHO05D007518 1.3e-110 404.4 605 48.4
Aqoxy3G03693 Aquilegia oxysepala HOM05D006007 ORTHO05D007518 2.3e-110 403.7 574 49.5
CiPaw.03G088800 Carya illinoinensis HOM05D006007 ORTHO05D007518 2.3e-110 403.7 597 47.6
Gohir.A11G072800 Gossypium hirsutum HOM05D006007 ORTHO05D007518 2.3e-110 403.7 608 48.5
Prupe.3G255200 Prunus persica HOM05D006007 ORTHO05D007518 1.5e-109 401.0 480 53.1
CiPaw.04G055900 Carya illinoinensis HOM05D006007 ORTHO05D007518 2.5e-109 400.2 460 54.3
Hund15552 Selenicereus undatus HOM05D006007 ORTHO05D007518 2.5e-109 400.2 476 54.2
Thecc.04G095300 Theobroma cacao HOM05D006007 ORTHO05D007518 2.5e-109 400.2 579 49.2
FAN02G0083 Fragaria x ananassa HOM05D006007 ORTHO05D007518 3.3e-109 399.8 606 47.9
Gohir.D11G077100 Gossypium hirsutum HOM05D006007 ORTHO05D007518 3.3e-109 399.8 611 48.3
Duzib264G0491 Durio zibethinus HOM05D006007 ORTHO05D007518 9.6e-109 398.3 582 49.0
PSO017G6380 Papaver somniferum HOM05D006007 ORTHO05D007518 4.8e-108 396.0 592 44.8
Haze_14433 Corylus avellana HOM05D006007 ORTHO05D007518 1.1e-107 394.8 514 51.6
Rhsim10G0048800 Rhododendron simsii HOM05D006007 ORTHO05D007518 1.4e-107 394.4 551 46.8
THA.LOC104823889 Tarenaya hassleriana HOM05D006007 ORTHO05D007518 1.4e-107 394.4 596 47.7
DCAR_005549 Daucus carota HOM05D006007 ORTHO05D007518 1.8e-107 394.0 550 48.0
PSO478G1877 Papaver somniferum HOM05D006007 ORTHO05D007518 1.2e-106 391.3 587 47.7
AUR62018183 Chenopodium quinoa HOM05D006007 ORTHO05D007518 1.5e-106 391.0 455 52.3
EL10Ac2g03139 Beta vulgaris HOM05D006007 ORTHO05D007518 2.0e-106 390.6 581 48.7
CANSAT64G1701 Cannabis sativa HOM05D006007 ORTHO05D007518 3.4e-106 389.8 601 46.6
vmacro05632 Vaccinium macrocarpon HOM05D006007 ORTHO05D007518 1.0e-105 388.3 574 47.6
Ah.10g032260 Amaranthus hybridus HOM05D006007 ORTHO05D007518 2.2e-105 387.1 480 52.1
FAN05G2596 Fragaria x ananassa HOM05D006007 ORTHO05D007518 2.2e-105 387.1 482 51.0
FAN14G4567 Fragaria x ananassa HOM05D006007 ORTHO05D007518 6.5e-105 385.6 628 46.5
Thhalv10003901m.g Eutrema salsugineum HOM05D006007 ORTHO05D007518 4.2e-104 382.9 562 47.3
Lsat_1_v5_gn_3_97780 Lactuca sativa HOM05D006007 ORTHO05D007518 3.5e-103 379.8 560 46.4
A02p36640 Brassica napus HOM05D006007 ORTHO05D007518 4.6e-103 379.4 590 47.1
Glyma.18G266400 Glycine max HOM05D006007 ORTHO05D007518 6.0e-103 379.0 643 46.8
Lalb_Chr17g0337001 Lupinus albus HOM05D006007 ORTHO05D007518 7.9e-103 378.6 628 44.9
COL.COLO4_07027 Corchorus olitorius HOM05D006007 ORTHO05D007518 1.3e-102 377.9 482 51.9
BraA02t08659Z Brassica rapa HOM05D006007 ORTHO05D007518 3.0e-102 376.7 590 46.8
Sp2g17990 Schrenkiella parvula HOM05D006007 ORTHO05D007518 6.7e-102 375.6 585 47.9
ATR0177G014 Amborella trichopoda HOM05D006007 ORTHO05D007518 8.7e-102 375.2 618 44.7
CDE02G4269 Ceratophyllum demersum HOM05D006007 ORTHO05D007518 1.1e-101 374.8 599 43.4
Lj4A118G52 Lonicera japonica HOM05D006007 ORTHO05D007518 1.1e-101 374.8 548 47.3
HPP92_007829 Vanilla planifolia HOM05D006007 ORTHO05D007518 7.4e-101 372.1 529 46.5
Aa31LG2G3900 Aethionema arabicum HOM05D006007 ORTHO05D007518 1.3e-100 371.3 579 46.6
C02p55600 Brassica napus HOM05D006007 ORTHO05D007518 3.7e-100 369.8 582 47.3
BolC2t11616H Brassica oleracea HOM05D006007 ORTHO05D007518 3.7e-100 369.8 582 47.3
Medtr7g013700 Medicago truncatula HOM05D006007 ORTHO05D007518 4.8e-100 369.4 610 46.2
BcaC03g17580 Brassica carinata HOM05D006007 ORTHO05D007518 1.1e-99 368.2 582 46.7
TWI32G0586 Tripterygium wilfordii HOM05D006007 ORTHO05D007518 2.4e-99 367.1 583 46.7
PGR004G1158 Punica granatum HOM05D006007 ORTHO05D007518 3.1e-99 366.7 499 48.9
BcaB07g30079 Brassica carinata HOM05D006007 ORTHO05D007518 9.0e-99 365.2 586 45.7
Zm00001eb008620 Zea mays HOM05D006007 ORTHO05D007518 1.2e-98 364.8 476 48.9
Ca_04352_v3 Cicer arietinum L. HOM05D006007 ORTHO05D007518 2.0e-98 364.0 543 46.4
Ca_30479_v3 Cicer arietinum L. HOM05D006007 ORTHO05D007518 2.0e-98 364.0 543 46.4
Glyma.08G245100 Glycine max HOM05D006007 ORTHO05D007518 4.5e-98 362.8 527 47.8
Nitab4.5_0010627g0030 Nicotiana tabacum HOM05D006007 ORTHO05D007518 5.0e-97 359.4 569 47.3
AT3G29390 Arabidopsis thaliana HOM05D006007 ORTHO05D007518 8.5e-97 358.6 480 49.0
Cpa.g.sc14.172 Carica papaya HOM05D006007 ORTHO05D007518 8.5e-97 358.6 370 57.0
Carub.0005s0814 Capsella rubella HOM05D006007 ORTHO05D007518 5.5e-96 355.9 605 46.1
Lj1g0023913 Lotus japonicus HOM05D006007 ORTHO05D007518 4.6e-95 352.8 636 43.4
AL5G19590 Arabidopsis lyrata HOM05D006007 ORTHO05D007518 7.9e-95 352.1 607 44.6
Phvul.008G033600 Phaseolus vulgaris HOM05D006007 ORTHO05D007518 1.1e-93 348.2 590 42.9
MELO3C022635.2 Cucumis melo HOM05D006007 ORTHO05D007518 2.2e-92 344.0 637 39.4
arahy.Tifrunner.gnm1.ann1.EQE0CJ Arachis hypogaea HOM05D006007 ORTHO05D007518 3.1e-91 340.1 544 45.4
arahy.Tifrunner.gnm1.ann1.J3LTHX Arachis hypogaea HOM05D006007 ORTHO05D007518 6.9e-91 339.0 544 45.2
Sed0005820 Sechium edule HOM05D006007 ORTHO05D007518 3.8e-89 333.2 621 41.2
ClCG07G016350 Citrullus lanatus HOM05D006007 ORTHO05D007518 1.1e-88 331.6 542 42.1
CsaV3_4G009190 Cucumis sativus L. HOM05D006007 ORTHO05D007518 9.4e-88 328.6 532 43.2
AUR62038668 Chenopodium quinoa HOM05D006007 ORTHO05D007518 2.0e-85 320.9 342 53.8
SEGI_40404 Sequoiadendron giganteum HOM05D006007 ORTHO05D007518 2.9e-81 307.0 614 39.1
Psat3g201920 Pisum sativum HOM05D006007 ORTHO05D007518 4.2e-80 303.1 391 48.1
TPR.G33475 Trifolium pratense HOM05D006007 ORTHO05D007518 5.9e-74 282.7 234 64.5
MBI19_g00631_MAGBIO Magnolia biondii HOM05D006007 ORTHO05D007518 3.6e-71 273.5 255 59.6
HPP92_007749 Vanilla planifolia HOM05D006007 ORTHO05D007518 4.8e-68 263.1 303 51.5
Mapoly0218s0012 Marchantia polymorpha HOM05D006007 ORTHO05D007518 2.7e-66 257.3 308 51.6
Sc10g0004660 Simmondsia chinensis HOM05D006007 ORTHO05D007518 1.7e-60 238.0 249 57.8
Pp3c3_22820 Physcomitrium patens HOM05D006007 ORTHO05D007518 3.7e-60 236.9 306 48.7
Hma1.2p1_0481F.1_g162150 Hydrangea macrophylla HOM05D006007 ORTHO05D007518 6.3e-60 236.1 355 49.0
Hma1.2p1_0481F.1_g162140 Hydrangea macrophylla HOM05D006007 ORTHO05D007518 1.1e-59 235.3 350 49.4
MD09G1066300 Malus domestica HOM05D006007 ORTHO05D007518 2.4e-59 234.2 238 59.2
Eucgr.J01380 Eucalyptus grandis HOM05D006007 ORTHO05D007518 1.5e-56 224.9 398 45.5
CBR_g19543 Chara braunii HOM05D006007 ORTHO05D007518 1.7e-44 184.9 462 32.5
MD09G1066400 Malus domestica HOM05D006007 ORTHO05D007518 1.9e-43 181.4 335 46.9
CDE05G1269 Ceratophyllum demersum HOM05D006007 ORTHO05D007518 4.1e-43 180.3 243 46.5
Hma1.2p1_0481F.1_g162130 Hydrangea macrophylla HOM05D006007 ORTHO05D007518 1.3e-41 175.3 177 56.5
Oeu051018.1 Olea europaea HOM05D006007 ORTHO05D007518 1.1e-38 165.6 242 47.5
Os03g0213900 Oryza sativa ssp. japonica HOM05D006007 ORTHO05D007518 3.2e-35 154.1 158 57.0
Sc10g0004670 Simmondsia chinensis HOM05D006007 ORTHO05D007518 9.2e-35 152.5 353 35.4
SEGI_00365 Sequoiadendron giganteum HOM05D006007 ORTHO05D007518 1.9e-32 144.8 131 58.8
MBI19_g00630_MAGBIO Magnolia biondii HOM05D006007 ORTHO05D007518 1.2e-31 142.1 226 44.2
SHI25685 Sapria himalayana HOM05D006007 ORTHO05D007518 1.5e-29 135.2 134 56.7
BraA09t36042Z Brassica rapa HOM05D006007 ORTHO05D007518 4.4e-29 133.7 99 72.7
A09p04060 Brassica napus HOM05D006007 ORTHO05D010543 1.9e-27 128.3 99 70.7
SHI25684 Sapria himalayana HOM05D006007 ORTHO05D007518 1.5e-21 108.6 175 44.0
Cre09.g389900 Chlamydomonas reinhardtii HOM05D006007 ORTHO05D007518 6.4e-20 103.2 374 28.1
CDE05G3437 Ceratophyllum demersum HOM05D006007 ORTHO05D007518 7.6e-13 79.7 209 31.1
BolC2t11584H Brassica oleracea HOM05D006007 ORTHO05D007518 1.7e-12 78.6 70 62.9
BcaC03g17562 Brassica carinata HOM05D006007 ORTHO05D007518 2.9e-12 77.8 242 32.2
HPP92_007750 Vanilla planifolia HOM05D006007 ORTHO05D007518 7.8e-10 69.7 80 53.8
CARHR153030 Cardamine hirsuta HOM05D006007 ORTHO05D007518 2.3e-09 68.2 65 55.4
Cpa.g.sc14.174 Carica papaya HOM05D006007 ORTHO05D007518 9.6e-08 62.8 106 40.6
MBI15_g14467_MAGBIO Magnolia biondii HOM05D003623 ORTHO05D007518 4.0e-06 57.4 129 35.7


User provided reference genes

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