Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_52.g17636 Utricularia gibba HOM05D055833 ORTHO05D051526 0.0e+00 1144.0 590 100.0
unitig_62.g23387 Utricularia gibba HOM05D055833 ORTHO05D051526 3.0e-124 449.9 547 51.2
Migut.H00615 Erythranthe guttata HOM05D001693 ORTHO05D001588 2.6e-19 101.3 597 25.6
SGA_v2.0_scaffold52G19126 Striga asiatica HOM05D001693 ORTHO05D001588 5.9e-19 100.1 746 25.3
SalBow1G3500 Salvia bowleyana HOM05D001693 ORTHO05D001588 1.3e-18 99.0 504 28.0
unitig_21.g20944 Utricularia gibba HOM05D001693 ORTHO05D001588 1.1e-17 95.9 647 26.9
GSVIVG01032914001 Vitis vinifera HOM05D001693 ORTHO05D001588 2.3e-15 88.2 203 36.5
SalBow1G8326 Salvia bowleyana HOM05D001693 ORTHO05D001588 1.1e-14 85.9 619 25.0
Migut.K01268 Erythranthe guttata HOM05D001693 ORTHO05D001588 3.7e-13 80.9 253 32.4
SGA_v2.0_scaffold4G02373 Striga asiatica HOM05D001693 ORTHO05D001588 1.1e-12 79.3 481 24.7
BraA03t12452Z Brassica rapa HOM05D001693 ORTHO05D001588 3.1e-12 77.8 154 35.7
C09p75560 Brassica napus HOM05D001693 ORTHO05D001588 6.9e-12 76.6 171 36.8
BolC5t35102H Brassica oleracea HOM05D001693 ORTHO05D001588 6.9e-12 76.6 171 36.8
BraA05t23155Z Brassica rapa HOM05D001693 ORTHO05D001588 1.2e-11 75.9 169 37.9
Ciclev10010955m.g Citrus clementina HOM05D001693 ORTHO05D001588 1.2e-11 75.9 348 24.4
vmacro18144 Vaccinium macrocarpon HOM05D001693 ORTHO05D001588 1.2e-11 75.9 209 32.1
A05p45060 Brassica napus HOM05D001693 ORTHO05D001588 2.0e-11 75.1 328 29.0
ECA238G2570 Erigeron canadensis HOM05D001693 ORTHO05D001588 1.0e-10 72.8 218 30.7
SalBow1G0566 Salvia bowleyana HOM05D001693 ORTHO05D001588 1.0e-10 72.8 327 29.1
HanXRQChr07g0199721 Helianthus annuus HOM05D001693 ORTHO05D001588 1.7e-10 72.0 300 28.0
Potri.017G095000 Populus trichocarpa HOM05D001693 ORTHO05D001588 1.7e-10 72.0 168 36.9
C03p39940 Brassica napus HOM05D001693 ORTHO05D001588 2.2e-10 71.6 248 30.2
Peaxi162Scf00166g00419 Petunia axillaris HOM05D001693 ORTHO05D001588 2.2e-10 71.6 227 29.1
Sabra17G0084200 Salix brachista HOM05D001693 ORTHO05D001588 2.2e-10 71.6 179 35.8
AL3G11420 Arabidopsis lyrata HOM05D001693 ORTHO05D001588 2.9e-10 71.2 149 35.6
AT3G02170 Arabidopsis thaliana HOM05D001693 ORTHO05D001588 2.9e-10 71.2 149 36.9
BcaC01g04479 Brassica carinata HOM05D001693 ORTHO05D001588 3.8e-10 70.9 160 34.4
CSS0000385 Camellia sinensis var. sinensis HOM05D001693 ORTHO05D001588 3.8e-10 70.9 157 36.3
BcaC01g04472 Brassica carinata HOM05D001693 ORTHO05D001588 5.0e-10 70.5 248 30.2
CARHR076140 Cardamine hirsuta HOM05D001693 ORTHO05D001588 6.5e-10 70.1 145 37.9
DCAR_025439 Daucus carota HOM05D001693 ORTHO05D001588 6.5e-10 70.1 192 30.2
QL02p067404 Quercus lobata HOM05D001693 ORTHO05D001588 6.5e-10 70.1 219 31.5
BolC3t16259H Brassica oleracea HOM05D001693 ORTHO05D001588 8.5e-10 69.7 248 30.2
Carub.0003s0129 Capsella rubella HOM05D001693 ORTHO05D001588 8.5e-10 69.7 149 34.9
PGSC0003DMG400001462 Solanum tuberosum HOM05D001693 ORTHO05D001588 8.5e-10 69.7 183 31.1
Sp3g01250 Schrenkiella parvula HOM05D001693 ORTHO05D001588 1.1e-09 69.3 158 34.2
Lju41C2T9 Lonicera japonica HOM05D001693 ORTHO05D001588 1.4e-09 68.9 166 31.3
Rhsim08G0075400 Rhododendron simsii HOM05D001693 ORTHO05D001588 1.4e-09 68.9 354 26.0
A03p32820 Brassica napus HOM05D001693 ORTHO05D001588 3.2e-09 67.8 229 30.6
Lj4C120T11 Lonicera japonica HOM05D001693 ORTHO05D001588 4.2e-09 67.4 143 35.0
Oeu033398.1 Olea europaea HOM05D001693 ORTHO05D001588 4.2e-09 67.4 345 26.7
Cpa.g.sc14.190 Carica papaya HOM05D001693 ORTHO05D001588 5.5e-09 67.0 200 29.5
Glyma.19G031100 Glycine max HOM05D001693 ORTHO05D001588 7.2e-09 66.6 190 30.5
MSTRG.2993 Avicennia marina HOM05D001693 ORTHO05D001588 2.1e-08 65.1 464 24.4
Oeu062168.1 Olea europaea HOM05D001693 ORTHO05D001588 2.1e-08 65.1 285 24.9
ECA246G4455 Erigeron canadensis HOM05D001693 ORTHO05D001588 4.7e-08 63.9 194 31.4
Glyma.06G204400 Glycine max HOM05D001693 ORTHO05D001588 4.7e-08 63.9 166 31.3
Glyma.18G268900 Glycine max HOM05D001693 ORTHO05D001588 4.7e-08 63.9 147 34.0
Hma1.2p1_0029F.1_g018050 Hydrangea macrophylla HOM05D001693 ORTHO05D001588 4.7e-08 63.9 187 28.3
THA.LOC104820992 Tarenaya hassleriana HOM05D001693 ORTHO05D001588 1.0e-07 62.8 283 26.1
arahy.Tifrunner.gnm1.ann1.8G7WAE Arachis hypogaea HOM05D001693 ORTHO05D001588 1.4e-07 62.4 198 30.3
HanXRQChr14g0449791 Helianthus annuus HOM05D001693 ORTHO05D001588 1.4e-07 62.4 258 26.7
Lsat_1_v5_gn_2_89521 Lactuca sativa HOM05D001693 ORTHO05D001588 1.4e-07 62.4 171 31.0
TWI60G1021 Tripterygium wilfordii HOM05D001693 ORTHO05D001588 1.4e-07 62.4 183 31.1
TPR.G4312 Trifolium pratense HOM05D001693 ORTHO05D001588 1.8e-07 62.0 127 35.4
VMungo1383G0207 Vigna mungo HOM05D001693 ORTHO05D001588 1.8e-07 62.0 139 30.9
Aa31LG5G12700 Aethionema arabicum HOM05D001693 ORTHO05D001588 2.3e-07 61.6 286 26.9
CANSAT64G1243 Cannabis sativa HOM05D001693 ORTHO05D001588 3.0e-07 61.2 123 36.6
Psat5g202520 Pisum sativum HOM05D001693 ORTHO05D001588 3.0e-07 61.2 191 29.8
arahy.Tifrunner.gnm1.ann1.07JFIQ Arachis hypogaea HOM05D001693 ORTHO05D001588 3.9e-07 60.8 149 33.6
MSTRG.3361 Avicennia marina HOM05D001693 ORTHO05D001588 3.9e-07 60.8 515 24.3
HanXRQChr04g0110051 Helianthus annuus HOM05D001693 ORTHO05D001588 3.9e-07 60.8 172 29.1
Nitab4.5_0010535g0010 Nicotiana tabacum HOM05D001693 ORTHO05D001588 3.9e-07 60.8 383 25.6
Thecc.04G097400 Theobroma cacao HOM05D001693 ORTHO05D001588 3.9e-07 60.8 113 37.2
Lalb_Chr07g0178331 Lupinus albus HOM05D001693 ORTHO05D001588 5.1e-07 60.5 163 30.1
Glyma.04G161000 Glycine max HOM05D001693 ORTHO05D001588 6.7e-07 60.1 166 30.1
Medtr6g015370 Medicago truncatula HOM05D001693 ORTHO05D001588 6.7e-07 60.1 129 35.7
EL10Ac5g11155 Beta vulgaris HOM05D001693 ORTHO05D001588 8.8e-07 59.7 185 29.2
HanXRQChr17g0546021 Helianthus annuus HOM05D001693 ORTHO05D001588 8.8e-07 59.7 199 31.2
Lj1g0002041 Lotus japonicus HOM05D001693 ORTHO05D001588 8.8e-07 59.7 156 32.7
Actinidia17589 Actinidia chinensis HOM05D001693 ORTHO05D001588 1.1e-06 59.3 456 23.2
COL.COLO4_37967 Corchorus olitorius HOM05D001693 ORTHO05D001588 1.1e-06 59.3 190 31.6
Thhalv10020021m.g Eutrema salsugineum HOM05D001693 ORTHO05D001588 1.1e-06 59.3 244 28.3
Lalb_Chr12g0197281 Lupinus albus HOM05D001693 ORTHO05D001588 1.1e-06 59.3 208 28.8
EL10Ac2g03148 Beta vulgaris HOM05D001693 ORTHO05D001588 1.5e-06 58.9 178 30.3
Cc07_g04320 Coffea canephora HOM05D001693 ORTHO05D001588 1.5e-06 58.9 178 30.9
Psat1g066800 Pisum sativum HOM05D001693 ORTHO05D001588 1.5e-06 58.9 115 34.8
AL6G26440 Arabidopsis lyrata HOM05D001693 ORTHO05D001588 2.0e-06 58.5 125 36.0
MSTRG.23879 Avicennia marina HOM05D001693 ORTHO05D001588 2.0e-06 58.5 565 22.5
Dinv34934 Davidia involucrata HOM05D001693 ORTHO05D001588 2.0e-06 58.5 274 27.7
Lsat_1_v5_gn_3_96320 Lactuca sativa HOM05D001693 ORTHO05D001588 2.0e-06 58.5 205 30.7
ClCG11G004820 Citrullus lanatus HOM05D001693 ORTHO05D001588 2.6e-06 58.2 159 33.3
FAN14G0699 Fragaria x ananassa HOM05D001693 ORTHO05D001588 2.6e-06 58.2 239 29.3
TPR.G12178 Trifolium pratense HOM05D001693 ORTHO05D001588 2.6e-06 58.2 201 28.9
Migut.D01631 Erythranthe guttata HOM05D001693 ORTHO05D001588 3.3e-06 57.8 142 32.4
Nitab4.5_0007160g0020 Nicotiana tabacum HOM05D001693 ORTHO05D001588 3.3e-06 57.8 266 27.1
THA.LOC104802976 Tarenaya hassleriana HOM05D001693 ORTHO05D001588 3.3e-06 57.8 285 26.3
VMungo1309G2921 Vigna mungo HOM05D001693 ORTHO05D001588 3.3e-06 57.8 85 40.0
Aqoxy3G03674 Aquilegia oxysepala HOM05D001693 ORTHO05D001588 4.4e-06 57.4 149 32.9
Carub.0006s1375 Capsella rubella HOM05D001693 ORTHO05D001588 4.4e-06 57.4 125 35.2
TAR622G1027 Trochodendron aralioides HOM05D001693 ORTHO05D001588 4.4e-06 57.4 163 30.7
arahy.Tifrunner.gnm1.ann1.AX54M2 Arachis hypogaea HOM05D001693 ORTHO05D001588 5.7e-06 57.0 157 31.2
Glyma.05G019800 Glycine max HOM05D001693 ORTHO05D001588 5.7e-06 57.0 204 27.5
Glyma.08G247500 Glycine max HOM05D001693 ORTHO05D001588 5.7e-06 57.0 309 26.9
Gohir.A09G243600 Gossypium hirsutum HOM05D001693 ORTHO05D001588 5.7e-06 57.0 338 25.4
Phvul.004G037800 Phaseolus vulgaris HOM05D001693 ORTHO05D001588 5.7e-06 57.0 214 29.4
Phvul.009G202300 Phaseolus vulgaris HOM05D001693 ORTHO05D001588 5.7e-06 57.0 166 29.5
AT5G15580 Arabidopsis thaliana HOM05D001693 ORTHO05D001588 7.4e-06 56.6 125 36.0
arahy.Tifrunner.gnm1.ann1.96TMTR Arachis hypogaea HOM05D001693 ORTHO05D001588 7.4e-06 56.6 90 38.9
Haze_14419 Corylus avellana HOM05D001693 ORTHO05D001588 7.4e-06 56.6 236 29.7
Medtr3g026110 Medicago truncatula HOM05D001693 ORTHO05D001588 7.4e-06 56.6 85 40.0
Nitab4.5_0001485g0020 Nicotiana tabacum HOM05D001693 ORTHO05D001588 7.4e-06 56.6 266 26.7
PGR083G1685 Punica granatum HOM05D001693 ORTHO05D001588 7.4e-06 56.6 180 26.7
Sp6g28510 Schrenkiella parvula HOM05D001693 ORTHO05D001588 7.4e-06 56.6 126 35.7
Hund02574 Selenicereus undatus HOM05D001693 ORTHO05D001588 7.4e-06 56.6 78 39.7
Actinidia26255 Actinidia chinensis HOM05D001693 ORTHO05D001588 9.7e-06 56.2 279 28.0
arahy.Tifrunner.gnm1.ann1.6FF65R Arachis hypogaea HOM05D001693 ORTHO05D001588 9.7e-06 56.2 120 34.2
arahy.Tifrunner.gnm1.ann1.AFC50C Arachis hypogaea HOM05D001693 ORTHO05D001588 9.7e-06 56.2 75 42.7
Gohir.D09G244300 Gossypium hirsutum HOM05D001693 ORTHO05D001588 9.7e-06 56.2 202 29.7
TAR374G0883 Trochodendron aralioides HOM05D001693 ORTHO05D001588 9.7e-06 56.2 166 32.5
VMungo0464G0046 Vigna mungo HOM05D001693 ORTHO05D001588 9.7e-06 56.2 143 33.6


User provided reference genes

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