Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_52.g17581 Utricularia gibba HOM05D006345 ORTHO05D007428 3.8e-145 518.1 252 100.0
Migut.D00572 Erythranthe guttata HOM05D006345 ORTHO05D007428 1.1e-102 377.1 251 70.5
MSTRG.21400 Avicennia marina HOM05D006345 ORTHO05D007428 2.9e-100 369.0 253 69.2
SalBow2G1193 Salvia bowleyana HOM05D006345 ORTHO05D007428 4.9e-100 368.2 256 68.8
SalBow7G0027 Salvia bowleyana HOM05D006345 ORTHO05D007428 1.4e-99 366.7 256 69.1
Nitab4.5_0001925g0110 Nicotiana tabacum HOM05D006345 ORTHO05D007428 3.7e-95 352.1 228 72.8
Ca_19950_v3 Cicer arietinum L. HOM05D006345 ORTHO05D007428 8.1e-95 350.9 241 68.5
Nitab4.5_0008647g0020 Nicotiana tabacum HOM05D006345 ORTHO05D007428 1.1e-94 350.5 234 72.2
PGSC0003DMG400023836 Solanum tuberosum HOM05D006345 ORTHO05D007428 3.1e-94 349.0 223 74.4
CAN.G575.62 Capsicum annuum HOM05D006345 ORTHO05D007428 6.9e-94 347.8 234 71.8
Cc09_g04580 Coffea canephora HOM05D006345 ORTHO05D007428 9.0e-94 347.4 248 67.3
MELO3C018575.2 Cucumis melo HOM05D006345 ORTHO05D007428 1.2e-93 347.1 256 66.8
CsaV3_7G007230 Cucumis sativus L. HOM05D006345 ORTHO05D007428 2.0e-93 346.3 256 66.4
Dinv19690 Davidia involucrata HOM05D006345 ORTHO05D007428 3.4e-93 345.5 259 64.9
Prupe.4G121300 Prunus persica HOM05D006345 ORTHO05D007428 3.4e-93 345.5 222 74.3
Psat7g230920 Pisum sativum HOM05D006345 ORTHO05D007428 4.5e-93 345.1 251 66.1
Cc06_g02140 Coffea canephora HOM05D006345 ORTHO05D007428 9.9e-93 344.0 256 64.8
QL08p052794 Quercus lobata HOM05D006345 ORTHO05D007428 9.9e-93 344.0 259 65.6
ClCG02G007550 Citrullus lanatus HOM05D006345 ORTHO05D007428 1.3e-92 343.6 258 65.1
Lj3g0013440 Lotus japonicus HOM05D006345 ORTHO05D007428 1.3e-92 343.6 249 66.7
Manes.16G061100 Manihot esculenta HOM05D006345 ORTHO05D007428 1.3e-92 343.6 256 65.2
Medtr4g024860 Medicago truncatula HOM05D000001 ORTHO05D000003 1.7e-92 343.2 248 66.5
Sed0017834 Sechium edule HOM05D006345 ORTHO05D007428 1.7e-92 343.2 256 64.5
Lalb_Chr07g0189941 Lupinus albus HOM05D006345 ORTHO05D007428 2.9e-92 342.4 251 67.3
Sopen12g034690 Solanum pennellii HOM05D006345 ORTHO05D007428 2.9e-92 342.4 223 72.6
Cpa.g.sc12.137 Carica papaya HOM05D006345 ORTHO05D007428 3.8e-92 342.0 245 65.3
Peaxi162Scf00062g10131 Petunia axillaris HOM05D006345 ORTHO05D007428 3.8e-92 342.0 234 70.9
Sed0021159 Sechium edule HOM05D006345 ORTHO05D007428 6.4e-92 341.3 257 65.8
SGA_v2.0_scaffold8G04616 Striga asiatica HOM05D006345 ORTHO05D007428 8.4e-92 340.9 249 66.3
TPR.G7580 Trifolium pratense HOM05D006345 ORTHO05D007428 8.4e-92 340.9 248 67.3
CSS0008102 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 1.4e-91 340.1 250 65.2
Oeu012935.1 Olea europaea HOM05D006345 ORTHO05D007428 1.4e-91 340.1 221 72.9
Sc05g0003040 Simmondsia chinensis HOM05D006345 ORTHO05D007428 1.4e-91 340.1 228 71.1
Ciclev10016345m.g Citrus clementina HOM05D006345 ORTHO05D007428 1.9e-91 339.7 258 63.2
CiPaw.01G263700 Carya illinoinensis HOM05D006345 ORTHO05D007428 2.5e-91 339.3 255 63.9
FvH4_3g13390 Fragaria vesca HOM05D006345 ORTHO05D007428 2.5e-91 339.3 222 71.6
FAN21G0075 Fragaria x ananassa HOM05D006345 ORTHO05D007428 2.5e-91 339.3 222 71.6
RcHm_v2.0_Chr5g0022101 Rosa chinensis HOM05D006345 ORTHO05D007428 2.5e-91 339.3 258 65.1
MD05G1242200 Malus domestica HOM05D006345 ORTHO05D007428 3.2e-91 339.0 255 65.5
Phvul.003G037201 Phaseolus vulgaris HOM05D006345 ORTHO05D007428 4.2e-91 338.6 249 67.5
MBI16_g30839_MAGBIO Magnolia biondii HOM05D006345 ORTHO05D007428 7.1e-91 337.8 242 65.7
Rhsim13G0136400 Rhododendron simsii HOM05D006345 ORTHO05D007428 7.1e-91 337.8 259 64.5
Duzib212G0272 Durio zibethinus HOM05D006345 ORTHO05D007428 1.2e-90 337.0 250 63.6
FAN11G3812 Fragaria x ananassa HOM05D006345 ORTHO05D007428 1.6e-90 336.7 222 71.2
COL.COLO4_13882 Corchorus olitorius HOM05D006345 ORTHO05D007428 2.7e-90 335.9 256 64.1
FAN25G2350 Fragaria x ananassa HOM05D006345 ORTHO05D007428 2.7e-90 335.9 221 71.5
Nn3g17198 Nelumbo nucifera HOM05D006345 ORTHO05D007428 2.7e-90 335.9 258 64.0
TAR624G0710 Trochodendron aralioides HOM05D006345 ORTHO05D007428 2.7e-90 335.9 255 63.9
FAN16G3736 Fragaria x ananassa HOM05D006345 ORTHO05D007428 6.0e-90 334.7 222 71.2
Glyma.03G027700 Glycine max HOM05D006345 ORTHO05D007428 7.9e-90 334.3 249 66.3
Thecc.04G283900 Theobroma cacao HOM05D006345 ORTHO05D007428 7.9e-90 334.3 258 63.2
VMungo1383G2204 Vigna mungo HOM05D006345 ORTHO05D007428 7.9e-90 334.3 249 65.9
arahy.Tifrunner.gnm1.ann1.G9BQRV Arachis hypogaea HOM05D006345 ORTHO05D007428 1.3e-89 333.6 250 65.2
ECA238G2485 Erigeron canadensis HOM05D006345 ORTHO05D007428 2.3e-89 332.8 229 68.1
CANSAT11G1250 Cannabis sativa HOM05D006345 ORTHO05D007428 3.0e-89 332.4 219 69.9
arahy.Tifrunner.gnm1.ann1.P3RVZQ Arachis hypogaea HOM05D006345 ORTHO05D007428 3.9e-89 332.0 250 64.8
Oeu017184.1 Olea europaea HOM05D006345 ORTHO05D007428 3.9e-89 332.0 226 70.8
HanXRQChr14g0447431 Helianthus annuus HOM05D006345 ORTHO05D007428 5.1e-89 331.6 229 67.7
Lalb_Chr13g0291791 Lupinus albus HOM05D006345 ORTHO05D007428 5.1e-89 331.6 252 65.1
Glyma.01G139633 Glycine max HOM05D006345 ORTHO05D007428 1.5e-88 330.1 248 64.5
arahy.Tifrunner.gnm1.ann1.W97VC3 Arachis hypogaea HOM05D006345 ORTHO05D007428 2.5e-88 329.3 250 64.4
arahy.Tifrunner.gnm1.ann1.S1VR06 Arachis hypogaea HOM05D006345 ORTHO05D007428 4.3e-88 328.6 250 64.4
EL10Ac3g05939 Beta vulgaris HOM05D006345 ORTHO05D007428 7.4e-88 327.8 253 61.7
Aqoxy7G02153 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 2.8e-87 325.9 224 68.3
DCAR_001254 Daucus carota HOM05D006345 ORTHO05D007428 3.7e-87 325.5 255 62.7
Gohir.A10G163600 Gossypium hirsutum HOM05D006345 ORTHO05D007428 3.7e-87 325.5 223 67.7
Gorai.011G189500 Gossypium raimondii HOM05D006345 ORTHO05D007428 3.7e-87 325.5 254 61.4
PGR042G3945 Punica granatum HOM05D006345 ORTHO05D007428 3.7e-87 325.5 253 61.3
Sabra01G0052000 Salix brachista HOM05D006345 ORTHO05D007428 4.8e-87 325.1 253 64.0
Ah.07g202050 Amaranthus hybridus HOM05D006345 ORTHO05D007428 2.4e-86 322.8 254 61.8
TWI53G2073 Tripterygium wilfordii HOM05D006345 ORTHO05D007428 4.0e-86 322.0 259 62.5
CiPaw.14G048700 Carya illinoinensis HOM05D006345 ORTHO05D007428 1.2e-85 320.5 221 67.9
PSO675G7514 Papaver somniferum HOM05D006345 ORTHO05D007428 2.0e-85 319.7 264 60.2
Gohir.D10G170000 Gossypium hirsutum HOM05D006345 ORTHO05D007428 4.5e-85 318.5 254 60.2
CDE04G1044 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 1.7e-84 316.6 245 63.3
Potri.001G073700 Populus trichocarpa HOM05D006345 ORTHO05D007428 1.7e-84 316.6 221 68.8
Eucgr.F03783 Eucalyptus grandis HOM05D006345 ORTHO05D007428 2.9e-84 315.8 253 61.3
THA.LOC104822694 Tarenaya hassleriana HOM05D006345 ORTHO05D007428 4.9e-84 315.1 221 69.2
CDE06G0136 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 1.1e-83 313.9 216 69.4
Aqoxy3G02382 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 1.4e-83 313.5 221 67.4
AUR62015383 Chenopodium quinoa HOM05D006345 ORTHO05D007428 2.5e-83 312.8 254 61.8
Lsat_1_v5_gn_3_103240 Lactuca sativa HOM05D006345 ORTHO05D007428 3.2e-83 312.4 243 62.1
PSO541G0968 Papaver somniferum HOM05D006345 ORTHO05D007428 7.1e-83 311.2 264 59.1
Carub.0003s1288 Capsella rubella HOM05D006345 ORTHO05D007428 1.6e-82 310.1 217 69.1
Aa31LG8G650 Aethionema arabicum HOM05D006345 ORTHO05D007428 2.7e-82 309.3 232 63.4
Ah.15g099610 Amaranthus hybridus HOM05D006345 ORTHO05D007428 6.0e-82 308.1 254 60.6
PSO782G3410 Papaver somniferum HOM05D006345 ORTHO05D007428 1.0e-81 307.4 231 65.4
AT3G13440 Arabidopsis thaliana HOM05D006345 ORTHO05D007428 8.7e-81 304.3 230 63.9
CARHR088090 Cardamine hirsuta HOM05D006345 ORTHO05D007428 5.7e-80 301.6 219 66.2
AL3G25340 Arabidopsis lyrata HOM05D006345 ORTHO05D007428 7.4e-80 301.2 230 63.0
ATR0561G247 Amborella trichopoda HOM05D006345 ORTHO05D007428 9.7e-80 300.8 245 59.6
Carub.0006s3398 Capsella rubella HOM05D006345 ORTHO05D007428 1.6e-79 300.1 221 65.2
Thhalv10021414m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 4.8e-79 298.5 219 64.8
BcaB04g21015 Brassica carinata HOM05D006345 ORTHO05D007428 6.3e-79 298.1 219 66.2
HPP92_018755 Vanilla planifolia HOM05D006345 ORTHO05D007428 6.3e-79 298.1 251 57.8
Sp3g11640 Schrenkiella parvula HOM05D006345 ORTHO05D007428 8.2e-79 297.7 219 64.4
BcaC09g48312 Brassica carinata HOM05D006345 ORTHO05D007428 1.2e-77 293.9 219 64.4
A05p36090 Brassica napus HOM05D002140 ORTHO05D007428 1.2e-77 293.9 222 65.3
C01p51620 Brassica napus HOM05D006345 ORTHO05D007428 1.2e-77 293.9 219 64.4
BolC1t05105H Brassica oleracea HOM05D006345 ORTHO05D007428 1.2e-77 293.9 219 64.4
BcaC05g29179 Brassica carinata HOM05D002140 ORTHO05D007428 7.7e-77 291.2 222 64.9
A01p40130 Brassica napus HOM05D006345 ORTHO05D007428 7.7e-77 291.2 219 63.9
C05p54470 Brassica napus HOM05D002140 ORTHO05D007428 7.7e-77 291.2 222 64.9
BolC5t34114H Brassica oleracea HOM05D002140 ORTHO05D007428 7.7e-77 291.2 222 64.9
CBR_g45447 Chara braunii HOM05D006345 ORTHO05D007428 1.0e-76 290.8 229 62.0
BraA01t04054Z Brassica rapa HOM05D006345 ORTHO05D007428 1.3e-76 290.4 219 63.5
BraA05t22416Z Brassica rapa HOM05D002140 ORTHO05D007428 1.7e-76 290.0 222 64.9
Pp3c9_17440 Physcomitrium patens HOM05D006345 ORTHO05D007428 1.7e-76 290.0 244 60.2
Mapoly0069s0066 Marchantia polymorpha HOM05D006345 ORTHO05D007428 2.9e-76 289.3 242 58.3
Zm00001eb211470 Zea mays HOM05D006345 ORTHO05D007428 6.5e-76 288.1 241 58.1
SHI16738 Sapria himalayana HOM05D006345 ORTHO05D007428 2.5e-75 286.2 210 66.7
Lsat_1_v5_gn_2_63801 Lactuca sativa HOM05D006345 ORTHO05D007428 4.2e-75 285.4 221 62.0
Solyc12g100070.3 Solanum lycopersicum HOM05D006345 ORTHO05D007428 7.2e-75 284.6 184 72.8
AagrBONN_evm.TU.Sc2ySwM_117.4015 Anthoceros agrestis HOM05D006345 ORTHO05D007428 6.7e-73 278.1 210 62.4
Os03g0824200 Oryza sativa ssp. japonica HOM05D006345 ORTHO05D007428 1.1e-72 277.3 228 57.5
SMO358G0200 Selaginella moellendorffii HOM05D006345 ORTHO05D007428 2.0e-69 266.5 211 61.6
Thhalv10009961m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 2.5e-67 259.6 219 58.9
AUR62002307 Chenopodium quinoa HOM05D006345 ORTHO05D007428 3.9e-65 252.3 254 52.8
Zm00001eb187530 Zea mays HOM05D006345 ORTHO05D007428 6.5e-60 235.0 186 60.2
SEGI_21458 Sequoiadendron giganteum HOM05D006345 ORTHO05D007428 5.3e-54 215.3 164 65.9
CAN.G1126.44 Capsicum annuum HOM05D006345 ORTHO05D007428 2.2e-44 183.3 179 52.5
CSS0000171 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 4.2e-43 179.1 138 62.3
Cre01.g036750 Chlamydomonas reinhardtii HOM05D006345 ORTHO05D007428 1.2e-42 177.6 213 45.1
Zm00001eb141630 Zea mays HOM05D006345 ORTHO05D007428 6.1e-42 175.3 145 58.6
Potri.003G157201 Populus trichocarpa HOM05D006345 ORTHO05D007428 1.5e-32 144.1 103 68.0
MCO02G297 Micromonas commoda HOM05D006345 ORTHO05D007428 9.8e-32 141.4 170 42.9
Sabra03G0114100 Salix brachista HOM05D000029 ORTHO05D000854 5.0e-28 129.0 197 39.6
Zm00001eb356470 Zea mays HOM05D006345 ORTHO05D007428 3.6e-26 122.9 99 59.6
ATR0006G036 Amborella trichopoda HOM05D006345 ORTHO05D007428 4.0e-09 66.2 49 61.2
Lj1P1152T38 Lonicera japonica HOM05D006345 ORTHO05D007428 1.5e-08 64.3 46 54.3


User provided reference genes

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