Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_52.g17560 Utricularia gibba HOM05D003761 ORTHO05D004412 2.9e-117 425.2 212 100.0
MSTRG.14590 Avicennia marina HOM05D003761 ORTHO05D004412 7.0e-39 164.9 209 41.6
Migut.H01629 Erythranthe guttata HOM05D003761 ORTHO05D004412 1.0e-37 161.0 187 45.5
MSTRG.13107 Avicennia marina HOM05D003761 ORTHO05D004412 2.6e-33 146.4 192 43.2
MSTRG.7132 Avicennia marina HOM05D003761 ORTHO05D004412 3.7e-32 142.5 191 44.0
SGA_v2.0_scaffold186G40120 Striga asiatica HOM05D003761 ORTHO05D004412 1.6e-30 137.1 193 39.9
Oeu057021.1 Olea europaea HOM05D003761 ORTHO05D004412 4.5e-30 135.6 160 43.1
CAN.G1186.30 Capsicum annuum HOM05D003761 ORTHO05D004412 2.9e-29 132.9 168 41.7
SGA_v2.0_scaffold49G18223 Striga asiatica HOM05D003761 ORTHO05D004412 3.8e-29 132.5 188 39.9
Cc09_g00350 Coffea canephora HOM05D003761 ORTHO05D004412 1.9e-28 130.2 154 42.9
SalBow8G1906 Salvia bowleyana HOM05D003761 ORTHO05D004412 1.9e-28 130.2 192 38.5
Sopen11g006960 Solanum pennellii HOM05D003761 ORTHO05D004412 4.2e-28 129.0 156 44.2
Hma1.2p1_1175F.1_g263990 Hydrangea macrophylla HOM05D003761 ORTHO05D004412 5.5e-28 128.6 161 40.4
Oeu025960.1 Olea europaea HOM05D003761 ORTHO05D004412 1.2e-27 127.5 199 40.2
Oeu002779.1 Olea europaea HOM05D003761 ORTHO05D004412 6.1e-27 125.2 185 39.5
SGA_v2.0_scaffold7G03701 Striga asiatica HOM05D003761 ORTHO05D004412 1.0e-26 124.4 190 38.4
Actinidia39257 Actinidia chinensis HOM05D003761 ORTHO05D004412 3.0e-26 122.9 186 38.2
Solyc11g012170.1 Solanum lycopersicum HOM05D003761 ORTHO05D004412 8.8e-26 121.3 153 43.8
DCAR_030834 Daucus carota HOM05D003761 ORTHO05D004412 1.2e-25 120.9 161 38.5
CSS0009294 Camellia sinensis var. sinensis HOM05D003761 ORTHO05D004412 2.0e-25 120.2 161 40.4
CSS0045719 Camellia sinensis var. sinensis HOM05D003761 ORTHO05D004412 2.0e-25 120.2 161 40.4
PGSC0003DMG400013274 Solanum tuberosum HOM05D003761 ORTHO05D004412 2.0e-25 120.2 152 42.8
Sabra06G0004500 Salix brachista HOM05D003761 ORTHO05D004412 4.4e-25 119.0 190 36.3
Actinidia11903 Actinidia chinensis HOM05D003761 ORTHO05D004412 7.5e-25 118.2 194 37.6
PGR004G2813 Punica granatum HOM05D003761 ORTHO05D004412 9.8e-25 117.9 198 34.8
Nitab4.5_0000143g0280 Nicotiana tabacum HOM05D003761 ORTHO05D004412 1.7e-24 117.1 164 40.2
ECA248G3040 Erigeron canadensis HOM05D003761 ORTHO05D004412 2.2e-24 116.7 184 36.4
Aqoxy4G01086 Aquilegia oxysepala HOM05D003761 ORTHO05D004412 2.8e-24 116.3 187 35.3
Potri.006G005600 Populus trichocarpa HOM05D003761 ORTHO05D004412 8.3e-24 114.8 183 35.0
PGR042G2523 Punica granatum HOM05D003761 ORTHO05D004412 1.4e-23 114.0 184 38.0
Duzib192G0597 Durio zibethinus HOM05D003761 ORTHO05D004412 1.8e-23 113.6 192 33.3
HanXRQChr01g0003591 Helianthus annuus HOM05D003761 ORTHO05D004412 1.8e-23 113.6 194 32.5
GSVIVG01005138001 Vitis vinifera HOM05D003761 ORTHO05D004412 2.4e-23 113.2 150 39.3
Ciclev10016770m.g Citrus clementina HOM05D003761 ORTHO05D004412 5.4e-23 112.1 188 34.0
Eucgr.E03855 Eucalyptus grandis HOM05D003761 ORTHO05D004412 5.4e-23 112.1 172 39.0
Lsat_1_v5_gn_1_130120 Lactuca sativa HOM05D003761 ORTHO05D004412 5.4e-23 112.1 187 33.2
Rhsim13G0141000 Rhododendron simsii HOM05D003761 ORTHO05D004412 5.4e-23 112.1 194 35.6
Manes.09G083000 Manihot esculenta HOM05D003761 ORTHO05D004412 7.0e-23 111.7 186 33.9
Thecc.06G240300 Theobroma cacao HOM05D003761 ORTHO05D004412 7.0e-23 111.7 191 34.6
Cpa.g.sc27.232 Carica papaya HOM05D003761 ORTHO05D004412 9.1e-23 111.3 168 35.1
Lsat_1_v5_gn_7_13080 Lactuca sativa HOM05D003761 ORTHO05D004412 9.1e-23 111.3 207 31.9
Peaxi162Scf00558g00515 Petunia axillaris HOM05D003761 ORTHO05D004412 9.1e-23 111.3 150 42.0
MBI18_g42884_MAGBIO Magnolia biondii HOM05D003761 ORTHO05D004412 1.2e-22 110.9 183 36.1
Dinv15342 Davidia involucrata HOM05D003761 ORTHO05D004412 1.6e-22 110.5 177 37.3
vmacro03612 Vaccinium macrocarpon HOM05D003761 ORTHO05D004412 2.7e-22 109.8 184 36.4
Migut.M01442 Erythranthe guttata HOM05D003761 ORTHO05D004412 3.5e-22 109.4 191 36.1
Gohir.A06G204100 Gossypium hirsutum HOM05D003761 ORTHO05D004412 3.5e-22 109.4 164 36.6
Gorai.010G248800 Gossypium raimondii HOM05D003761 ORTHO05D004412 3.5e-22 109.4 164 36.6
Potri.016G006200 Populus trichocarpa HOM05D003761 ORTHO05D004412 3.5e-22 109.4 189 36.0
CiPaw.09G108600 Carya illinoinensis HOM05D003761 ORTHO05D004412 4.5e-22 109.0 179 34.1
TAR626G0912 Trochodendron aralioides HOM05D003761 ORTHO05D004412 4.5e-22 109.0 181 35.9
Haze_07014 Corylus avellana HOM05D003761 ORTHO05D004412 5.9e-22 108.6 189 34.4
THA.LOC104806736 Tarenaya hassleriana HOM05D003761 ORTHO05D004412 5.9e-22 108.6 185 38.4
Lj4g0001357 Lotus japonicus HOM05D003761 ORTHO05D004412 7.7e-22 108.2 188 34.6
Nitab4.5_0001198g0070 Nicotiana tabacum HOM05D003761 ORTHO05D004412 7.7e-22 108.2 166 38.6
QL05p067831 Quercus lobata HOM05D003761 ORTHO05D004412 1.0e-21 107.8 184 32.6
HanXRQChr15g0470241 Helianthus annuus HOM05D003761 ORTHO05D004412 1.3e-21 107.5 154 37.0
Lj2C256G8 Lonicera japonica HOM05D003761 ORTHO05D004412 1.3e-21 107.5 161 36.6
CDE10G1059 Ceratophyllum demersum HOM05D003761 ORTHO05D004412 1.7e-21 107.1 164 36.6
AUR62012843 Chenopodium quinoa HOM05D003761 ORTHO05D004412 2.2e-21 106.7 174 37.4
Gohir.D06G217400 Gossypium hirsutum HOM05D003761 ORTHO05D004412 2.2e-21 106.7 164 36.0
AUR62021816 Chenopodium quinoa HOM05D003761 ORTHO05D004412 3.8e-21 105.9 174 36.8
Eucgr.L00155 Eucalyptus grandis HOM05D003761 ORTHO05D004412 3.8e-21 105.9 186 33.3
Oeu025400.1 Olea europaea HOM05D003761 ORTHO05D004412 3.8e-21 105.9 166 37.3
COL.COLO4_31936 Corchorus olitorius HOM05D003761 ORTHO05D004412 5.0e-21 105.5 157 35.7
Prupe.4G004300 Prunus persica HOM05D003761 ORTHO05D004412 5.0e-21 105.5 212 32.1
Cfa000041 Carpinus fangiana HOM05D003761 ORTHO05D004412 6.5e-21 105.1 189 33.3
FAN25G2178 Fragaria x ananassa HOM05D003761 ORTHO05D004412 8.5e-21 104.8 158 37.3
Psat4g002880 Pisum sativum HOM05D003761 ORTHO05D004412 8.5e-21 104.8 197 33.0
Ca_20995_v3 Cicer arietinum L. HOM05D003761 ORTHO05D004412 1.1e-20 104.4 173 34.1
Lalb_Chr15g0088211 Lupinus albus HOM05D003761 ORTHO05D004412 1.1e-20 104.4 183 36.6
AL8G10320 Arabidopsis lyrata HOM05D003761 ORTHO05D004412 3.2e-20 102.8 186 37.6
MBI18_g27019_MAGBIO Magnolia biondii HOM05D003761 ORTHO05D004412 3.2e-20 102.8 156 35.9
CANSAT56G1869 Cannabis sativa HOM05D003761 ORTHO05D004412 4.2e-20 102.4 151 38.4
Lj6g0023004 Lotus japonicus HOM05D003761 ORTHO05D004412 4.2e-20 102.4 196 35.2
FvH4_3g00370 Fragaria vesca HOM05D003761 ORTHO05D004412 5.5e-20 102.1 165 34.5
Glyma.17G005900 Glycine max HOM05D003761 ORTHO05D004412 5.5e-20 102.1 195 34.4
Sc24g0000400 Simmondsia chinensis HOM05D003761 ORTHO05D004412 5.5e-20 102.1 168 36.9
FAN21G2431 Fragaria x ananassa HOM05D003761 ORTHO05D004412 7.2e-20 101.7 165 34.5
vmacro03611 Vaccinium macrocarpon HOM05D003761 ORTHO05D004412 7.2e-20 101.7 161 35.4
vmacro23224 Vaccinium macrocarpon HOM05D003761 ORTHO05D004412 7.2e-20 101.7 161 35.4
Aa31LG9G5380 Aethionema arabicum HOM05D003761 ORTHO05D004412 9.4e-20 101.3 192 34.9
AT5G47635 Arabidopsis thaliana HOM05D003761 ORTHO05D004412 9.4e-20 101.3 186 37.1
Lalb_Chr13g0304361 Lupinus albus HOM05D003761 ORTHO05D004412 9.4e-20 101.3 156 37.2
Phvul.003G086700 Phaseolus vulgaris HOM05D003761 ORTHO05D004412 9.4e-20 101.3 186 33.9
Sed0021615 Sechium edule HOM05D003761 ORTHO05D004412 9.4e-20 101.3 176 35.8
arahy.Tifrunner.gnm1.ann1.UZ71G8 Arachis hypogaea HOM05D003761 ORTHO05D004412 1.2e-19 100.9 190 33.7
MD10G1338600 Malus domestica HOM05D003761 ORTHO05D004412 1.6e-19 100.5 211 32.7
Nn1g07502 Nelumbo nucifera HOM05D003761 ORTHO05D004412 2.1e-19 100.1 193 30.1
Atru.chr1.2273 Acer truncatum HOM05D003761 ORTHO05D004412 2.7e-19 99.8 188 31.4
BcaC06g31357 Brassica carinata HOM05D003761 ORTHO05D004412 2.7e-19 99.8 163 36.8
A06p44900 Brassica napus HOM05D003761 ORTHO05D004412 2.7e-19 99.8 186 36.6
CsaV3_1G015780 Cucumis sativus L. HOM05D003761 ORTHO05D004412 2.7e-19 99.8 197 33.0
CsaV3_UNG065500 Cucumis sativus L. HOM05D003761 ORTHO05D004412 2.7e-19 99.8 197 33.0
A09p23140 Brassica napus HOM05D003761 ORTHO05D004412 3.6e-19 99.4 187 36.9
BraA06t27361Z Brassica rapa HOM05D003761 ORTHO05D004412 3.6e-19 99.4 181 36.5
BraA09t37917Z Brassica rapa HOM05D003761 ORTHO05D004412 3.6e-19 99.4 187 36.9
Eucgr.L00154 Eucalyptus grandis HOM05D003761 ORTHO05D004412 3.6e-19 99.4 184 32.1
MD05G1360900 Malus domestica HOM05D003761 ORTHO05D004412 3.6e-19 99.4 171 33.3
EL10Ac8g20260 Beta vulgaris HOM05D003761 ORTHO05D004412 4.7e-19 99.0 160 35.0
Carub.0004s2229 Capsella rubella HOM05D003761 ORTHO05D004412 4.7e-19 99.0 202 34.2
ClCG01G010750 Citrullus lanatus HOM05D003761 ORTHO05D004412 4.7e-19 99.0 198 35.4
PSO675G1588 Papaver somniferum HOM05D003761 ORTHO05D004412 4.7e-19 99.0 189 33.3
Sp2g12340 Schrenkiella parvula HOM05D003761 ORTHO05D004412 6.1e-19 98.6 186 35.5
Thhalv10001056m.g Eutrema salsugineum HOM05D003761 ORTHO05D004412 1.0e-18 97.8 182 34.6
PSO541G3650 Papaver somniferum HOM05D003761 ORTHO05D004412 1.0e-18 97.8 189 33.9
arahy.Tifrunner.gnm1.ann1.YY2BB8 Arachis hypogaea HOM05D003761 ORTHO05D004412 1.4e-18 97.4 190 35.8
BcaB02g09050 Brassica carinata HOM05D003761 ORTHO05D004412 1.4e-18 97.4 185 35.1
C07p31280 Brassica napus HOM05D003761 ORTHO05D004412 1.4e-18 97.4 186 35.5
Carub.0008s0015 Capsella rubella HOM05D003761 ORTHO05D004412 1.4e-18 97.4 188 33.5
HPP92_024932 Vanilla planifolia HOM05D003761 ORTHO05D004412 1.4e-18 97.4 185 33.0
CARHR173680 Cardamine hirsuta HOM05D003761 ORTHO05D004412 1.8e-18 97.1 181 35.4
HPP92_024936 Vanilla planifolia HOM05D003761 ORTHO05D004412 1.8e-18 97.1 185 33.0
MELO3C025526.2 Cucumis melo HOM05D003761 ORTHO05D004412 2.3e-18 96.7 169 33.7
MBI19_g14888_MAGBIO Magnolia biondii HOM05D003761 ORTHO05D004412 2.3e-18 96.7 173 32.4
VMungo1215G0779 Vigna mungo HOM05D003761 ORTHO05D004412 3.0e-18 96.3 190 33.2
BcaC04g21612 Brassica carinata HOM05D003761 ORTHO05D004412 4.0e-18 95.9 186 33.9
C09p29870 Brassica napus HOM05D003761 ORTHO05D004412 4.0e-18 95.9 186 33.9
Medtr4g133932 Medicago truncatula HOM05D003761 ORTHO05D004412 4.0e-18 95.9 163 33.7
TPR.G5987 Trifolium pratense HOM05D003761 ORTHO05D004412 5.2e-18 95.5 162 37.7
Sabra16G0011000 Salix brachista HOM05D003761 ORTHO05D004412 6.8e-18 95.1 157 36.3
BcaB07g30768 Brassica carinata HOM05D003761 ORTHO05D004412 1.2e-17 94.4 159 35.8
BolC4t22355H Brassica oleracea HOM05D003761 ORTHO05D004412 1.2e-17 94.4 194 34.0
Hma1.2p1_1175F.1_g263980 Hydrangea macrophylla HOM05D003761 ORTHO05D004412 1.2e-17 94.4 90 48.9
BraA05t19604Z Brassica rapa HOM05D003761 ORTHO05D004412 1.5e-17 94.0 194 33.5
Sp4g22430 Schrenkiella parvula HOM05D003761 ORTHO05D004412 1.5e-17 94.0 183 36.1
TWI38G2030 Tripterygium wilfordii HOM05D003761 ORTHO05D004412 2.6e-17 93.2 203 32.0
A05p06360 Brassica napus HOM05D003761 ORTHO05D004412 3.4e-17 92.8 194 33.0
Sed0014180 Sechium edule HOM05D003761 ORTHO05D004412 3.4e-17 92.8 187 32.6
THA.LOC104798379 Tarenaya hassleriana HOM05D003761 ORTHO05D004412 3.4e-17 92.8 166 36.7
AL4G37770 Arabidopsis lyrata HOM05D003761 ORTHO05D004412 5.7e-17 92.0 202 32.7
BolC4t28284H Brassica oleracea HOM05D003761 ORTHO05D004412 7.5e-17 91.7 191 32.5
AT2G40113 Arabidopsis thaliana HOM05D003761 ORTHO05D004412 9.8e-17 91.3 192 33.9
BolC7t43669H Brassica oleracea HOM05D003761 ORTHO05D004412 9.8e-17 91.3 186 34.4
Actinidia02285 Actinidia chinensis HOM05D000829 ORTHO05D000690 1.3e-16 90.9 168 34.5
Aa31LG2G12410 Aethionema arabicum HOM05D003761 ORTHO05D004412 1.7e-16 90.5 183 32.8
Ah.09g233900 Amaranthus hybridus HOM05D003761 ORTHO05D004412 1.7e-16 90.5 156 37.2
BcaB06g29129 Brassica carinata HOM05D003761 ORTHO05D004412 1.7e-16 90.5 165 34.5
TWI38G1412 Tripterygium wilfordii HOM05D003761 ORTHO05D004412 1.7e-16 90.5 212 30.2
Thhalv10017342m.g Eutrema salsugineum HOM05D003761 ORTHO05D004412 3.7e-16 89.4 157 35.7
BcaB02g09051 Brassica carinata HOM05D003761 ORTHO05D004412 4.9e-16 89.0 184 33.2
CARHR135090 Cardamine hirsuta HOM05D003761 ORTHO05D004412 6.3e-16 88.6 156 35.9
BcaC02g07354 Brassica carinata HOM05D003761 ORTHO05D004412 8.3e-16 88.2 191 31.9
BcaC06g34236 Brassica carinata HOM05D003761 ORTHO05D004412 1.4e-15 87.4 193 33.2
Aa31LG5G19480 Aethionema arabicum HOM05D003761 ORTHO05D004412 1.8e-15 87.0 156 34.0
CARHR223820 Cardamine hirsuta HOM05D003761 ORTHO05D004412 2.4e-15 86.7 192 29.2
Sopen11g007440 Solanum pennellii HOM05D003761 ORTHO05D004412 9.2e-15 84.7 190 32.1
A04p30050 Brassica napus HOM05D003761 ORTHO05D004412 1.2e-14 84.3 191 30.9
Solyc11g012705.2 Solanum lycopersicum HOM05D003761 ORTHO05D004412 1.2e-14 84.3 190 32.1
BraA04t18501Z Brassica rapa HOM05D003761 ORTHO05D004412 2.0e-14 83.6 191 30.9
Carub.0007s2420 Capsella rubella HOM05D003761 ORTHO05D004412 2.0e-14 83.6 185 29.7
PGSC0003DMG400013298 Solanum tuberosum HOM05D003761 ORTHO05D004412 2.0e-14 83.6 191 34.0
BcaC09g50449 Brassica carinata HOM05D003761 ORTHO05D004412 3.5e-14 82.8 181 31.5
C01p25300 Brassica napus HOM05D003761 ORTHO05D004412 3.5e-14 82.8 181 31.5
BolC1t02480H Brassica oleracea HOM05D003761 ORTHO05D004412 3.5e-14 82.8 181 31.5
Peaxi162Scf00442g00073 Petunia axillaris HOM05D003761 ORTHO05D004412 3.5e-14 82.8 161 36.6
ATR0827G170 Amborella trichopoda HOM05D003761 ORTHO05D004412 7.7e-14 81.6 167 30.5
Thhalv10026465m.g Eutrema salsugineum HOM05D003761 ORTHO05D004412 1.3e-13 80.9 154 29.2
Os10g0208600 Oryza sativa ssp. japonica HOM05D003761 ORTHO05D004412 2.3e-13 80.1 155 33.5
Zm00001eb050510 Zea mays HOM05D003761 ORTHO05D004412 2.3e-13 80.1 163 33.1
BraA01t01941Z Brassica rapa HOM05D003761 ORTHO05D004412 2.9e-13 79.7 179 30.7
AL7G37500 Arabidopsis lyrata HOM05D003761 ORTHO05D004412 3.8e-13 79.3 161 28.6
BcaNung03472 Brassica carinata HOM05D003761 ORTHO05D004412 5.0e-13 79.0 181 30.9
AT4G17215 Arabidopsis thaliana HOM05D003761 ORTHO05D004412 6.6e-13 78.6 192 28.1
BcaC06g33549 Brassica carinata HOM05D003761 ORTHO05D004412 1.5e-12 77.4 191 29.8
C07p48660 Brassica napus HOM05D003761 ORTHO05D004412 1.5e-12 77.4 191 29.8
BolC7t45373H Brassica oleracea HOM05D003761 ORTHO05D004412 1.5e-12 77.4 191 29.8
BraA03t14124Z Brassica rapa HOM05D003761 ORTHO05D004412 1.5e-12 77.4 191 28.8
A03p50350 Brassica napus HOM05D003761 ORTHO05D004412 1.9e-12 77.0 191 28.8
CAN.G1156.14 Capsicum annuum HOM05D003761 ORTHO05D004412 5.6e-12 75.5 167 31.1
Sp7g16980 Schrenkiella parvula HOM05D003761 ORTHO05D004412 1.2e-11 74.3 191 29.8
BcaNung03474 Brassica carinata HOM05D003761 ORTHO05D004412 2.1e-11 73.6 191 28.8
Sc05g0009870 Simmondsia chinensis HOM05D003761 ORTHO05D004412 3.6e-11 72.8 92 41.3
BolC9t55850H Brassica oleracea HOM05D003761 ORTHO05D004412 8.0e-11 71.6 100 38.0
BcaNung00112 Brassica carinata HOM05D003761 ORTHO05D004412 3.0e-10 69.7 151 31.1
Cpa.g.sc27.234 Carica papaya HOM05D003761 ORTHO05D004412 4.0e-10 69.3 90 36.7
Os10g0206500 Oryza sativa ssp. japonica HOM05D003761 ORTHO05D004412 8.9e-10 68.2 190 28.9
C04p67800 Brassica napus HOM05D003761 ORTHO05D004412 3.2e-07 59.7 79 40.5
SEGI_00399 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 7.0e-07 58.5 95 38.9


User provided reference genes

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