Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_52.g17526 Utricularia gibba HOM05D004453 ORTHO05D005375 1.5e-130 469.5 234 100.0
unitig_62.g23532 Utricularia gibba HOM05D004453 ORTHO05D005375 1.5e-82 310.1 232 70.7
Migut.N00531 Erythranthe guttata HOM05D004453 ORTHO05D005375 4.8e-57 225.3 239 53.1
MSTRG.18889 Avicennia marina HOM05D004453 ORTHO05D005375 1.6e-52 210.3 229 50.7
Oeu023964.1 Olea europaea HOM05D004453 ORTHO05D005375 3.0e-51 206.1 234 49.6
SGA_v2.0_scaffold6G03329 Striga asiatica HOM05D004453 ORTHO05D005375 3.9e-51 205.7 237 51.5
Dinv03791 Davidia involucrata HOM05D004453 ORTHO05D005375 1.7e-46 190.3 235 46.4
GSVIVG01025506001 Vitis vinifera HOM05D004453 ORTHO05D005375 2.2e-46 189.9 239 47.7
Manes.17G052200 Manihot esculenta HOM05D004453 ORTHO05D005375 2.9e-46 189.5 230 50.9
Dinv13490 Davidia involucrata HOM05D004453 ORTHO05D005375 4.2e-45 185.7 227 46.7
Cc01_g00270 Coffea canephora HOM05D004453 ORTHO05D005375 5.5e-45 185.3 229 46.7
Rhsim01G0183700 Rhododendron simsii HOM05D004453 ORTHO05D005375 2.1e-44 183.3 229 48.0
Actinidia16228 Actinidia chinensis HOM05D004453 ORTHO05D005375 3.6e-44 182.6 227 46.3
Manes.16G034900 Manihot esculenta HOM05D004453 ORTHO05D005375 4.6e-44 182.2 229 48.5
Eucgr.B03584 Eucalyptus grandis HOM05D004453 ORTHO05D005375 1.0e-43 181.0 209 49.8
SGA_v2.0_scaffold3G01700 Striga asiatica HOM05D004453 ORTHO05D005375 1.4e-43 180.6 202 51.0
TWI60G0130 Tripterygium wilfordii HOM05D004453 ORTHO05D005375 1.8e-43 180.3 229 47.2
QL01p007925 Quercus lobata HOM05D004453 ORTHO05D005375 3.0e-43 179.5 242 45.5
DCAR_023824 Daucus carota HOM05D004453 ORTHO05D005375 8.8e-43 177.9 197 49.7
vmacro12597 Vaccinium macrocarpon HOM05D004453 ORTHO05D005375 1.5e-42 177.2 197 50.8
CSS0040072 Camellia sinensis var. sinensis HOM05D004453 ORTHO05D005375 2.6e-42 176.4 230 47.0
Thhalv10011735m.g Eutrema salsugineum HOM05D004453 ORTHO05D005375 2.6e-42 176.4 232 46.1
Glyma.20G024900 Glycine max HOM05D004453 ORTHO05D005375 3.3e-42 176.0 239 47.3
THA.LOC104815673 Tarenaya hassleriana HOM05D004453 ORTHO05D005375 3.3e-42 176.0 234 47.0
ClCG02G024480 Citrullus lanatus HOM05D004453 ORTHO05D005375 4.4e-42 175.6 197 51.3
Cfa009532 Carpinus fangiana HOM05D004453 ORTHO05D005375 7.4e-42 174.9 229 46.3
Aqoxy1G00087 Aquilegia oxysepala HOM05D004453 ORTHO05D005375 9.7e-42 174.5 217 47.5
Cpa.g.sc119.21 Carica papaya HOM05D004453 ORTHO05D005375 9.7e-42 174.5 195 51.3
PGR119G0742 Punica granatum HOM05D004453 ORTHO05D005375 9.7e-42 174.5 233 46.8
EL10Ac7g17533 Beta vulgaris HOM05D004453 ORTHO05D005375 1.3e-41 174.1 179 51.4
CsaV3_4G017680 Cucumis sativus L. HOM05D004453 ORTHO05D005375 1.7e-41 173.7 218 47.2
Carub.0001s4404 Capsella rubella HOM05D004453 ORTHO05D005375 2.2e-41 173.3 232 45.7
Sp1g41150 Schrenkiella parvula HOM05D004453 ORTHO05D005375 2.2e-41 173.3 232 45.3
TWI34G0101 Tripterygium wilfordii HOM05D004453 ORTHO05D005375 2.8e-41 172.9 231 46.8
C03p92850 Brassica napus HOM05D004453 ORTHO05D005375 4.8e-41 172.2 236 44.9
BolC3t21591H Brassica oleracea HOM05D004453 ORTHO05D005375 4.8e-41 172.2 236 44.9
TAR623G1190 Trochodendron aralioides HOM05D004453 ORTHO05D005375 6.3e-41 171.8 229 41.5
CARHR045220 Cardamine hirsuta HOM05D004453 ORTHO05D005375 8.2e-41 171.4 229 45.9
AT1G55535 Arabidopsis thaliana HOM05D004453 ORTHO05D005375 1.1e-40 171.0 232 45.7
Sed0012812 Sechium edule HOM05D004453 ORTHO05D005375 1.1e-40 171.0 187 52.9
Atru.chr4.902 Acer truncatum HOM05D004453 ORTHO05D005375 1.4e-40 170.6 229 44.5
Eucgr.J01746 Eucalyptus grandis HOM05D004453 ORTHO05D005375 1.4e-40 170.6 230 44.8
A08p00560 Brassica napus HOM05D004453 ORTHO05D005375 2.4e-40 169.9 233 45.1
AUR62040892 Chenopodium quinoa HOM05D001653 ORTHO05D001751 2.4e-40 169.9 181 51.4
BraA08t32115Z Brassica rapa HOM05D004453 ORTHO05D005375 3.1e-40 169.5 233 45.1
AUR62042621 Chenopodium quinoa HOM05D004453 ORTHO05D005375 3.1e-40 169.5 181 51.4
Ciclev10016282m.g Citrus clementina HOM05D004453 ORTHO05D005375 4.1e-40 169.1 232 47.0
COL.COLO4_35070 Corchorus olitorius HOM05D004453 ORTHO05D005375 4.1e-40 169.1 237 46.0
Peaxi162Scf00186g01212 Petunia axillaris HOM05D004453 ORTHO05D005375 4.1e-40 169.1 229 44.5
BcaC01g01533 Brassica carinata HOM05D004453 ORTHO05D005375 6.9e-40 168.3 233 44.2
MBI19_g09317_MAGBIO Magnolia biondii HOM05D004453 ORTHO05D005375 6.9e-40 168.3 230 42.6
Potri.001G001400 Populus trichocarpa HOM05D004453 ORTHO05D005375 6.9e-40 168.3 196 49.5
BcaB02g10815 Brassica carinata HOM05D004453 ORTHO05D005375 9.1e-40 167.9 232 44.0
Sopen01g019490 Solanum pennellii HOM05D004453 ORTHO05D005375 9.1e-40 167.9 211 47.9
Psat7g133480 Pisum sativum HOM05D004453 ORTHO05D005375 1.2e-39 167.5 231 44.2
Sabra01G0001000 Salix brachista HOM05D004453 ORTHO05D005375 1.2e-39 167.5 197 48.2
BcaC08g44204 Brassica carinata HOM05D004453 ORTHO05D005375 1.5e-39 167.2 232 44.0
BolC6t36812H Brassica oleracea HOM05D004453 ORTHO05D005375 1.5e-39 167.2 232 44.0
Ah.04g153920 Amaranthus hybridus HOM05D004453 ORTHO05D005375 2.0e-39 166.8 181 49.7
MD03G1001500 Malus domestica HOM05D004453 ORTHO05D005375 2.0e-39 166.8 223 48.4
Sc13g0003960 Simmondsia chinensis HOM05D004453 ORTHO05D005375 2.0e-39 166.8 180 50.6
Solyc01g050070.4 Solanum lycopersicum HOM05D004453 ORTHO05D005375 2.0e-39 166.8 211 47.4
MELO3C031044.2 Cucumis melo HOM05D004453 ORTHO05D005375 2.6e-39 166.4 205 47.3
MD11G1001200 Malus domestica HOM05D004453 ORTHO05D005375 2.6e-39 166.4 221 48.0
AL1G63560 Arabidopsis lyrata HOM05D004453 ORTHO05D005375 3.4e-39 166.0 229 45.0
arahy.Tifrunner.gnm1.ann1.GHD6QC Arachis hypogaea HOM05D004453 ORTHO05D005375 3.4e-39 166.0 243 46.5
PGR102G2973 Punica granatum HOM05D004453 ORTHO05D005375 5.9e-39 165.2 218 44.5
ECA238G2653 Erigeron canadensis HOM05D004453 ORTHO05D005375 7.7e-39 164.9 208 45.2
Lalb_Chr16g0385441 Lupinus albus HOM05D004453 ORTHO05D005375 7.7e-39 164.9 231 45.5
Os07g0223700 Oryza sativa ssp. japonica HOM05D004453 ORTHO05D005375 7.7e-39 164.9 232 44.8
arahy.Tifrunner.gnm1.ann1.C35Y2E Arachis hypogaea HOM05D004453 ORTHO05D005375 1.0e-38 164.5 225 48.0
Prupe.6G001400 Prunus persica HOM05D004453 ORTHO05D005375 1.0e-38 164.5 217 48.8
A05p17380 Brassica napus HOM05D004453 ORTHO05D005375 1.3e-38 164.1 233 43.3
Glyma.07G225000 Glycine max HOM05D004453 ORTHO05D005375 1.3e-38 164.1 239 44.8
Lj4g0023466 Lotus japonicus HOM05D004453 ORTHO05D005375 1.7e-38 163.7 212 47.2
PSO339G2035 Papaver somniferum HOM05D004453 ORTHO05D005375 2.2e-38 163.3 231 41.1
Medtr4g083300 Medicago truncatula HOM05D004453 ORTHO05D005375 2.9e-38 162.9 225 46.7
PSO384G0395 Papaver somniferum HOM05D004453 ORTHO05D005375 2.9e-38 162.9 232 40.9
Ca_18793_v3 Cicer arietinum L. HOM05D004453 ORTHO05D005375 8.5e-38 161.4 219 47.5
RcHm_v2.0_Chr5g0084051 Rosa chinensis HOM05D004453 ORTHO05D005375 8.5e-38 161.4 184 51.6
TAR369G0719 Trochodendron aralioides HOM05D004453 ORTHO05D005375 8.5e-38 161.4 229 41.5
Zm00001eb303530 Zea mays HOM05D004453 ORTHO05D005375 8.5e-38 161.4 232 44.4
FAN11G3564 Fragaria x ananassa HOM05D004453 ORTHO05D005375 1.4e-37 160.6 228 46.5
FAN16G2113 Fragaria x ananassa HOM05D004453 ORTHO05D005375 1.4e-37 160.6 223 47.1
FAN25G0403 Fragaria x ananassa HOM05D004453 ORTHO05D005375 1.4e-37 160.6 223 47.1
Nn2g15897 Nelumbo nucifera HOM05D004453 ORTHO05D005375 1.4e-37 160.6 213 46.9
C06p16140 Brassica napus HOM05D004453 ORTHO05D005375 2.5e-37 159.8 232 43.5
FvH4_3g45940 Fragaria vesca HOM05D004453 ORTHO05D005375 2.5e-37 159.8 223 47.1
FAN21G0323 Fragaria x ananassa HOM05D004453 ORTHO05D005375 2.5e-37 159.8 223 47.1
Hund01806 Selenicereus undatus HOM05D000185 ORTHO05D000105 4.2e-37 159.1 234 42.7
Nn7g35809 Nelumbo nucifera HOM05D004453 ORTHO05D005375 7.2e-37 158.3 234 41.9
TPR.G34071 Trifolium pratense HOM05D004453 ORTHO05D005375 9.4e-37 157.9 209 47.8
HanXRQChr14g0437111 Helianthus annuus HOM05D004453 ORTHO05D005375 1.2e-36 157.5 204 43.6
Lsat_1_v5_gn_1_71301 Lactuca sativa HOM05D004453 ORTHO05D005375 1.2e-36 157.5 173 49.7
QL01p007909 Quercus lobata HOM05D004453 ORTHO05D005375 1.6e-36 157.1 180 50.0
CiPaw.13G179200 Carya illinoinensis HOM05D004453 ORTHO05D005375 3.6e-36 156.0 157 53.5
Lalb_Chr05g0219881 Lupinus albus HOM05D004453 ORTHO05D005375 3.6e-36 156.0 204 46.6
Nitab4.5_0002355g0020 Nicotiana tabacum HOM05D004453 ORTHO05D005375 3.6e-36 156.0 229 44.1
ECA248G0105 Erigeron canadensis HOM05D004453 ORTHO05D005375 1.0e-35 154.5 227 42.3
Phvul.002G101400 Phaseolus vulgaris HOM05D004453 ORTHO05D005375 1.4e-35 154.1 229 45.0
Thecc.09G205600 Theobroma cacao HOM05D004453 ORTHO05D005375 3.0e-35 152.9 234 42.3
Gohir.D03G147000 Gossypium hirsutum HOM05D004453 ORTHO05D005375 5.2e-35 152.1 188 47.9
Gohir.A03G021700 Gossypium hirsutum HOM05D004453 ORTHO05D005375 1.5e-34 150.6 205 46.8
SHI31305 Sapria himalayana HOM05D004453 ORTHO05D005375 1.5e-34 150.6 176 51.7
VMungo0251G3504 Vigna mungo HOM05D004453 ORTHO05D005375 2.6e-34 149.8 196 46.9
Aa31LG10G710 Aethionema arabicum HOM05D004453 ORTHO05D005375 3.3e-34 149.4 221 43.9
ATR0068G064 Amborella trichopoda HOM05D004453 ORTHO05D005375 3.3e-34 149.4 198 44.9
Duzib150G1073 Durio zibethinus HOM05D004453 ORTHO05D005375 4.4e-34 149.1 240 41.7
Gorai.003G154400 Gossypium raimondii HOM05D004453 ORTHO05D005375 4.4e-34 149.1 188 46.8
Haze_22921 Corylus avellana HOM05D004453 ORTHO05D005375 7.4e-34 148.3 201 45.8
Gohir.A08G014200 Gossypium hirsutum HOM05D004453 ORTHO05D005375 7.4e-34 148.3 234 41.0
CDE04G0921 Ceratophyllum demersum HOM05D004453 ORTHO05D005375 1.3e-33 147.5 195 44.1
CDE02G3000 Ceratophyllum demersum HOM05D004453 ORTHO05D005375 2.8e-33 146.4 195 43.1
HPP92_026813 Vanilla planifolia HOM05D004453 ORTHO05D005375 2.8e-33 146.4 231 40.3
HPP92_000788 Vanilla planifolia HOM05D004453 ORTHO05D005375 3.7e-33 146.0 232 40.1
CARHR088030 Cardamine hirsuta HOM05D004453 ORTHO05D005375 6.3e-33 145.2 203 45.3
Aa31LG8G630 Aethionema arabicum HOM05D004453 ORTHO05D005375 1.1e-32 144.4 185 46.5
Gohir.D08G020800 Gossypium hirsutum HOM05D004453 ORTHO05D005375 1.1e-32 144.4 234 40.2
Gorai.004G020100 Gossypium raimondii HOM05D004453 ORTHO05D005375 1.1e-32 144.4 234 40.2
Carub.0003s1279 Capsella rubella HOM05D004453 ORTHO05D005375 3.1e-32 142.9 254 39.8
Lsat_1_v5_gn_2_50660 Lactuca sativa HOM05D004453 ORTHO05D005375 3.1e-32 142.9 212 42.5
AL3G25290 Arabidopsis lyrata HOM05D004453 ORTHO05D005375 1.2e-31 141.0 164 51.8
PSO675G3694 Papaver somniferum HOM05D004453 ORTHO05D005375 1.2e-31 141.0 206 44.2
SHI06880 Sapria himalayana HOM05D004453 ORTHO05D005375 1.6e-31 140.6 163 52.1
Nitab4.5_0000075g0210 Nicotiana tabacum HOM05D004453 ORTHO05D005375 4.5e-31 139.0 230 37.8
SEGI_24089 Sequoiadendron giganteum HOM05D004453 ORTHO05D005375 4.5e-31 139.0 216 41.2
PSO541G5087 Papaver somniferum HOM05D004453 ORTHO05D005375 5.9e-31 138.7 206 43.2
SalBow3G0087 Salvia bowleyana HOM05D004453 ORTHO05D005375 1.3e-30 137.5 196 45.4
A05p36110 Brassica napus HOM05D004453 ORTHO05D005375 1.7e-30 137.1 163 47.9
AT3G13420 Arabidopsis thaliana HOM05D004453 ORTHO05D005375 2.2e-30 136.7 164 48.2
C05p54480 Brassica napus HOM05D004453 ORTHO05D005375 2.9e-30 136.3 163 46.6
BolC5t34115H Brassica oleracea HOM05D004453 ORTHO05D005375 2.9e-30 136.3 163 46.6
Thhalv10021458m.g Eutrema salsugineum HOM05D004453 ORTHO05D005375 5.0e-30 135.6 164 48.2
Potri.003G223300 Populus trichocarpa HOM05D004453 ORTHO05D005375 6.5e-30 135.2 153 49.7
AagrBONN_evm.TU.Sc2ySwM_228.4359 Anthoceros agrestis HOM05D004453 ORTHO05D005375 4.2e-29 132.5 187 43.3
Sp3g11610 Schrenkiella parvula HOM05D004453 ORTHO05D005375 9.4e-29 131.3 177 45.2
Mapoly0036s0042 Marchantia polymorpha HOM05D004453 ORTHO05D005375 8.8e-27 124.8 208 40.9
BcaC05g29180 Brassica carinata HOM05D004453 ORTHO05D005375 1.5e-26 124.0 147 46.9
SMO203G0107 Selaginella moellendorffii HOM05D004453 ORTHO05D005375 2.7e-23 113.2 181 42.0
SMO271G0148 Selaginella moellendorffii HOM05D004453 ORTHO05D005375 8.5e-22 108.2 184 41.8
Pp3c14_21170 Physcomitrium patens HOM05D004453 ORTHO05D005375 1.5e-21 107.5 179 41.9
BraA05t20635Z Brassica rapa HOM05D004453 ORTHO05D005375 1.9e-21 107.1 123 51.2
Lj1C553T2 Lonicera japonica HOM05D004453 ORTHO05D005375 1.6e-20 104.0 105 53.3
Pp3c2_4610 Physcomitrium patens HOM05D004453 ORTHO05D005375 2.1e-20 103.6 211 37.0
CARHR152870 Cardamine hirsuta HOM05D004453 ORTHO05D005375 8.0e-20 101.7 115 52.2
Pp3c1_38420 Physcomitrium patens HOM05D004453 ORTHO05D005375 8.8e-19 98.2 185 37.3
Oeu060910.1 Olea europaea HOM05D004453 ORTHO05D005375 3.4e-18 96.3 115 44.3
Actinidia30440 Actinidia chinensis HOM05D004453 ORTHO05D005375 1.3e-17 94.4 70 67.1
Lj1C553T1 Lonicera japonica HOM05D004453 ORTHO05D005375 1.7e-17 94.0 73 64.4
HPP92_019023 Vanilla planifolia HOM05D004453 ORTHO05D005375 1.0e-14 84.7 82 56.1
SMO353G0048 Selaginella moellendorffii HOM05D004453 ORTHO05D005375 5.0e-14 82.4 192 33.3
Zm00001eb095200 Zea mays HOM05D004453 ORTHO05D005375 2.2e-09 67.0 112 42.0


User provided reference genes

Program Settings