Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_52.g17450 Utricularia gibba HOM05D006908 ORTHO05D008662 1.4e-195 686.0 337 100.0
SalBow2G2262 Salvia bowleyana HOM05D006908 ORTHO05D008662 1.6e-101 373.6 329 60.5
MSTRG.11073 Avicennia marina HOM05D006908 ORTHO05D008662 1.5e-99 367.1 339 57.2
Migut.I00872 Erythranthe guttata HOM05D006908 ORTHO05D008662 6.2e-98 361.7 322 57.1
PGSC0003DMG400005687 Solanum tuberosum HOM05D006908 ORTHO05D008662 6.4e-95 351.7 323 56.3
Lj5C59T9 Lonicera japonica HOM05D006908 ORTHO05D008662 2.4e-94 349.7 340 55.6
Sopen03g039000 Solanum pennellii HOM05D006908 ORTHO05D008662 3.2e-94 349.4 322 56.2
Nitab4.5_0002308g0060 Nicotiana tabacum HOM05D006908 ORTHO05D008662 9.2e-94 347.8 325 55.4
Actinidia01807 Actinidia chinensis HOM05D006908 ORTHO05D008662 1.6e-93 347.1 346 55.2
CAN.G438.72 Capsicum annuum HOM05D006908 ORTHO05D008662 3.5e-93 345.9 324 54.9
Cc04_g03340 Coffea canephora HOM05D006908 ORTHO05D008662 8.6e-92 341.3 340 53.5
Rhsim08G0222000 Rhododendron simsii HOM05D006908 ORTHO05D008662 8.6e-92 341.3 349 53.0
GSVIVG01017098001 Vitis vinifera HOM05D006908 ORTHO05D008662 1.5e-91 340.5 323 52.6
Dinv38042 Davidia involucrata HOM05D006908 ORTHO05D008662 3.3e-91 339.3 340 51.5
Haze_16403 Corylus avellana HOM05D006908 ORTHO05D008662 5.6e-91 338.6 319 54.2
Hma1.2p1_0323F.1_g125120 Hydrangea macrophylla HOM05D006908 ORTHO05D008662 1.6e-90 337.0 340 50.0
EL10Ac9g22006 Beta vulgaris HOM05D006908 ORTHO05D008662 2.8e-90 336.3 313 54.0
Thecc.06G089400 Theobroma cacao HOM05D006908 ORTHO05D008662 6.2e-90 335.1 324 52.5
Gorai.006G098400 Gossypium raimondii HOM05D006908 ORTHO05D008662 8.1e-90 334.7 334 51.5
Nn8g39204 Nelumbo nucifera HOM05D006908 ORTHO05D008662 1.4e-89 334.0 349 51.9
COL.COLO4_30388 Corchorus olitorius HOM05D006908 ORTHO05D008662 1.8e-89 333.6 327 52.0
Oeu063957.2 Olea europaea HOM05D006908 ORTHO05D008662 1.8e-89 333.6 309 55.3
QL05p023344 Quercus lobata HOM05D006908 ORTHO05D008662 4.0e-89 332.4 322 52.5
CiPaw.01G238600 Carya illinoinensis HOM05D006908 ORTHO05D008662 6.8e-89 331.6 325 52.6
vmacro18903 Vaccinium macrocarpon HOM05D006908 ORTHO05D008662 1.5e-88 330.5 381 49.3
ECA247G1365 Erigeron canadensis HOM05D006908 ORTHO05D008662 9.9e-88 327.8 331 53.2
DCAR_023055 Daucus carota HOM05D006908 ORTHO05D008662 2.2e-87 326.6 322 53.4
MD17G1194300 Malus domestica HOM05D006908 ORTHO05D008662 2.2e-87 326.6 326 52.5
Sabra01G0145800 Salix brachista HOM05D006908 ORTHO05D008662 4.9e-87 325.5 327 52.3
Ah.01g005440 Amaranthus hybridus HOM05D006908 ORTHO05D008662 3.2e-86 322.8 312 53.2
Atru.chr1.3281 Acer truncatum HOM05D006908 ORTHO05D008662 5.4e-86 322.0 329 51.1
Hund06614 Selenicereus undatus HOM05D006908 ORTHO05D008662 7.1e-86 321.6 314 52.2
Duzib160G0703 Durio zibethinus HOM05D006908 ORTHO05D008662 2.7e-85 319.7 333 50.5
Lj3g0017668 Lotus japonicus HOM05D006908 ORTHO05D008662 1.3e-84 317.4 329 52.3
Sc10g0007370 Simmondsia chinensis HOM05D006908 ORTHO05D008662 1.7e-84 317.0 331 50.2
Eucgr.J02986 Eucalyptus grandis HOM05D006908 ORTHO05D008662 2.3e-84 316.6 322 50.9
Lalb_Chr22g0351301 Lupinus albus HOM05D006908 ORTHO05D008662 3.0e-84 316.2 320 52.8
PSO782G4818 Papaver somniferum HOM05D006908 ORTHO05D008662 5.1e-84 315.5 341 50.7
arahy.Tifrunner.gnm1.ann1.0IDI1A Arachis hypogaea HOM05D006908 ORTHO05D008662 8.6e-84 314.7 318 51.3
arahy.Tifrunner.gnm1.ann1.UK934I Arachis hypogaea HOM05D006908 ORTHO05D008662 8.6e-84 314.7 318 51.3
PSO063G2605 Papaver somniferum HOM05D006908 ORTHO05D008662 1.9e-83 313.5 350 49.4
PGR102G2040 Punica granatum HOM05D006908 ORTHO05D008662 2.5e-83 313.2 348 47.7
RcHm_v2.0_Chr2g0138011 Rosa chinensis HOM05D006908 ORTHO05D008662 1.2e-82 310.8 339 49.6
Manes.11G045900 Manihot esculenta HOM05D006908 ORTHO05D008662 2.1e-82 310.1 319 53.3
Phvul.005G170700 Phaseolus vulgaris HOM05D006908 ORTHO05D008662 2.1e-82 310.1 335 49.3
CsaV3_3G025130 Cucumis sativus L. HOM05D006908 ORTHO05D008662 2.8e-82 309.7 333 49.8
Prupe.3G070300 Prunus persica HOM05D006908 ORTHO05D008662 2.8e-82 309.7 333 49.8
MELO3C012958.2 Cucumis melo HOM05D006908 ORTHO05D008662 3.6e-82 309.3 333 49.8
HanXRQChr02g0032801 Helianthus annuus HOM05D006908 ORTHO05D008662 8.1e-82 308.1 325 51.7
Solyc03g120130.4 Solanum lycopersicum HOM05D006908 ORTHO05D008662 8.1e-82 308.1 323 51.7
FAN09G3067 Fragaria x ananassa HOM05D006908 ORTHO05D008662 1.1e-81 307.8 326 48.5
AUR62042927 Chenopodium quinoa HOM05D006908 ORTHO05D008662 4.0e-81 305.8 332 49.1
VMungo1080G1808 Vigna mungo HOM05D006908 ORTHO05D008662 4.0e-81 305.8 319 50.2
TAR626G0624 Trochodendron aralioides HOM05D006908 ORTHO05D008662 6.8e-81 305.1 376 46.5
ClCG07G013040 Citrullus lanatus HOM05D006908 ORTHO05D008662 8.9e-81 304.7 338 49.1
Sp5g35850 Schrenkiella parvula HOM05D006908 ORTHO05D008662 8.9e-81 304.7 304 51.0
FAN05G1986 Fragaria x ananassa HOM05D006908 ORTHO05D008662 1.2e-80 304.3 329 47.4
Medtr2g102040 Medicago truncatula HOM05D006908 ORTHO05D008662 1.5e-80 303.9 332 48.5
CANSAT56G3342 Cannabis sativa HOM05D006908 ORTHO05D008662 9.9e-80 301.2 340 47.1
TPR.G37174 Trifolium pratense HOM05D006908 ORTHO05D008662 1.3e-79 300.8 347 48.1
FvH4_6g31280 Fragaria vesca HOM05D006908 ORTHO05D008662 2.2e-79 300.1 324 49.1
Sed0021689 Sechium edule HOM05D006908 ORTHO05D008662 2.9e-79 299.7 336 49.4
Ca_01120_v3 Cicer arietinum L. HOM05D006908 ORTHO05D008662 1.9e-78 297.0 320 48.4
Gohir.D09G082700 Gossypium hirsutum HOM05D006908 ORTHO05D008662 1.9e-78 297.0 334 47.9
Nitab4.5_0000671g0150 Nicotiana tabacum HOM05D006908 ORTHO05D008662 9.3e-78 294.7 322 50.3
Glyma.15G014900 Glycine max HOM05D006908 ORTHO05D008662 2.1e-77 293.5 322 48.8
Aa31LG4G230 Aethionema arabicum HOM05D006908 ORTHO05D008662 4.6e-77 292.4 347 47.3
Ciclev10025928m.g Citrus clementina HOM05D006908 ORTHO05D008662 4.6e-77 292.4 355 44.8
BcaC08g47592 Brassica carinata HOM05D002960 ORTHO05D003632 6.0e-77 292.0 314 48.7
Potri.001G181200 Populus trichocarpa HOM05D006908 ORTHO05D008662 7.8e-77 291.6 298 52.0
CSS0010187 Camellia sinensis var. sinensis HOM05D006908 ORTHO05D008662 3.9e-76 289.3 296 52.0
BcaC08g47561 Brassica carinata HOM05D006908 ORTHO05D008662 6.6e-76 288.5 311 49.2
CARHR074570 Cardamine hirsuta HOM05D006908 ORTHO05D008662 8.7e-76 288.1 319 48.9
Thhalv10018901m.g Eutrema salsugineum HOM05D006908 ORTHO05D008662 1.1e-75 287.7 319 48.3
Gohir.A09G082800 Gossypium hirsutum HOM05D006908 ORTHO05D008662 3.3e-75 286.2 328 46.6
CDE02G0011 Ceratophyllum demersum HOM05D006908 ORTHO05D008662 7.3e-75 285.0 325 47.7
HPP92_003725 Vanilla planifolia HOM05D006908 ORTHO05D008662 9.6e-75 284.6 313 47.6
THA.LOC104812520 Tarenaya hassleriana HOM05D006908 ORTHO05D008662 4.8e-74 282.3 334 45.2
AT1G79915 Arabidopsis thaliana HOM05D006908 ORTHO05D008662 2.4e-73 280.0 312 47.4
Carub.0002s2758 Capsella rubella HOM05D006908 ORTHO05D008662 3.1e-73 279.6 317 45.4
Hma1.2p1_0323F.1_g125130 Hydrangea macrophylla HOM05D006908 ORTHO05D008662 3.1e-73 279.6 331 44.4
C06p54330 Brassica napus HOM05D002960 ORTHO05D003632 1.2e-72 277.7 340 45.0
BolC6t40444H Brassica oleracea HOM05D002960 ORTHO05D003632 1.2e-72 277.7 340 45.0
Aqoxy7G01689 Aquilegia oxysepala HOM05D006908 ORTHO05D008662 2.6e-72 276.6 328 47.0
Peaxi162Scf00015g00453 Petunia axillaris HOM05D006908 ORTHO05D008662 4.4e-72 275.8 321 48.0
Zm00001eb275430 Zea mays HOM05D006908 ORTHO05D008662 3.8e-71 272.7 346 42.5
BraA07t32051Z Brassica rapa HOM05D006908 ORTHO05D008662 4.9e-71 272.3 324 46.3
TWI75G1463 Tripterygium wilfordii HOM05D006908 ORTHO05D008662 2.4e-70 270.0 315 46.7
Psat5g298720 Pisum sativum HOM05D006908 ORTHO05D008662 1.2e-69 267.7 292 47.3
Os06g0639300 Oryza sativa ssp. japonica HOM05D006908 ORTHO05D008662 1.0e-68 264.6 330 44.5
SEGI_13943 Sequoiadendron giganteum HOM05D006908 ORTHO05D008662 5.1e-68 262.3 348 42.2
AUR62016450 Chenopodium quinoa HOM05D006908 ORTHO05D008662 1.1e-67 261.2 284 48.6
Cfa002075 Carpinus fangiana HOM05D006908 ORTHO05D008662 2.6e-64 250.0 266 50.0
A07p45490 Brassica napus HOM05D006908 ORTHO05D008662 2.3e-60 236.9 373 39.7
SHI10939 Sapria himalayana HOM05D006908 ORTHO05D008662 1.3e-58 231.1 252 49.6
MBI15_g13424_MAGBIO Magnolia biondii HOM05D006908 ORTHO05D008662 4.8e-58 229.2 256 50.0
ATR0602G186 Amborella trichopoda HOM05D006908 ORTHO05D008662 2.9e-55 219.9 250 46.0
Cpa.g.sc0.185 Carica papaya HOM05D006908 ORTHO05D008662 2.9e-55 219.9 215 54.0
Mapoly0072s0004 Marchantia polymorpha HOM05D006908 ORTHO05D008662 4.9e-55 219.2 331 38.1
AagrBONN_evm.TU.Sc2ySwM_344.5185 Anthoceros agrestis HOM05D006908 ORTHO05D008662 6.5e-55 218.8 329 40.1
AUR62033073 Chenopodium quinoa HOM05D006908 ORTHO05D008662 3.7e-50 203.0 305 41.3
CBR_g20274 Chara braunii HOM05D006908 ORTHO05D008662 4.5e-48 196.1 319 37.3
Lsat_1_v5_gn_1_35121 Lactuca sativa HOM05D006908 ORTHO05D008662 7.6e-48 195.3 218 49.1
Pp3c16_8290 Physcomitrium patens HOM05D006908 ORTHO05D008662 1.4e-46 191.0 358 33.0
CSS0029579 Camellia sinensis var. sinensis HOM05D006908 ORTHO05D008662 3.0e-44 183.3 188 50.5
BcaC04g22058 Brassica carinata HOM05D006908 ORTHO05D008662 9.7e-43 178.3 315 37.1
SGA_v2.0_scaffold37G14828 Striga asiatica HOM05D006908 ORTHO05D008662 1.0e-39 168.3 147 58.5
C09p24020 Brassica napus HOM05D006908 ORTHO05D008662 9.1e-33 145.2 171 45.0
FAN02G3381 Fragaria x ananassa HOM05D006908 ORTHO05D008662 5.3e-25 119.4 233 34.3
SMO347G0515 Selaginella moellendorffii HOM05D006908 ORTHO05D008662 2.0e-24 117.5 185 38.4
AL2G41640 Arabidopsis lyrata HOM05D006908 ORTHO05D008662 4.0e-20 103.2 125 44.0
BolC9t55322H Brassica oleracea HOM05D006908 ORTHO05D008662 1.5e-19 101.3 89 51.7
Actinidia32749 Actinidia chinensis HOM05D006908 ORTHO05D008662 7.5e-19 99.0 109 52.3
Cpa.g.sc41.12 Carica papaya HOM05D006908 ORTHO05D008662 9.7e-19 98.6 84 56.0
Cpa.g.sc41.10 Carica papaya HOM05D006908 ORTHO05D008662 6.5e-07 59.3 94 46.8
Gohir.A07G121300 Gossypium hirsutum HOM05D002956 ORTHO05D008031 1.1e-06 58.5 191 23.6
Gohir.D07G125600 Gossypium hirsutum HOM05D002956 ORTHO05D008031 7.2e-06 55.8 161 24.2


User provided reference genes

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