Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_52.g17373 Utricularia gibba HOM05D006047 ORTHO05D007353 3.0e-64 248.4 135 100.0
SGA_v2.0_scaffold207G41930 Striga asiatica HOM05D006047 ORTHO05D007353 1.1e-42 176.8 136 70.6
SGA_v2.0_scaffold80G25840 Striga asiatica HOM05D006047 ORTHO05D007353 7.3e-42 174.1 134 70.9
Migut.N01327 Erythranthe guttata HOM05D006047 ORTHO05D007353 4.9e-38 161.4 144 63.9
PGSC0003DMG400006182 Solanum tuberosum HOM05D006047 ORTHO05D007353 2.4e-37 159.1 151 58.9
Peaxi162Scf00362g00511 Petunia axillaris HOM05D006047 ORTHO05D007353 4.1e-37 158.3 146 63.7
Solyc01g111670.4 Solanum lycopersicum HOM05D006047 ORTHO05D007353 7.1e-37 157.5 147 59.2
Sopen01g053710 Solanum pennellii HOM05D006047 ORTHO05D007353 7.1e-37 157.5 147 59.2
Duzib132G0293 Durio zibethinus HOM05D006047 ORTHO05D007353 1.0e-35 153.7 134 62.7
CSS0000109 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 1.3e-35 153.3 138 63.0
COL.COLO4_17357 Corchorus olitorius HOM05D006047 ORTHO05D007353 3.0e-35 152.1 140 63.6
Dinv41931 Davidia involucrata HOM05D006047 ORTHO05D007353 3.0e-35 152.1 144 61.1
GSVIVG01024006001 Vitis vinifera HOM05D006047 ORTHO05D007353 3.0e-35 152.1 132 62.1
Gohir.D01G001800 Gossypium hirsutum HOM05D006047 ORTHO05D007353 5.1e-35 151.4 128 64.1
Gorai.002G002400 Gossypium raimondii HOM05D006047 ORTHO05D007353 5.1e-35 151.4 128 64.1
EL10Ac9g21359 Beta vulgaris HOM05D006047 ORTHO05D007353 6.6e-35 151.0 133 60.9
Sopen11g024350 Solanum pennellii HOM05D006047 ORTHO05D007353 8.6e-35 150.6 147 57.1
Aqoxy3G00951 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 1.5e-34 149.8 135 60.7
Hma1.2p1_0163F.1_g072560 Hydrangea macrophylla HOM05D006047 ORTHO05D007353 1.9e-34 149.4 147 55.8
Aqoxy1G03282 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 2.5e-34 149.1 135 61.5
Gohir.A01G002200 Gossypium hirsutum HOM05D006047 ORTHO05D007353 2.5e-34 149.1 128 63.3
Sc08g0002850 Simmondsia chinensis HOM05D006047 ORTHO05D007353 4.3e-34 148.3 131 64.1
Thecc.02G058000 Theobroma cacao HOM05D006047 ORTHO05D007353 4.3e-34 148.3 142 60.6
Cc09_g09850 Coffea canephora HOM05D006047 ORTHO05D007353 7.3e-34 147.5 148 57.4
RcHm_v2.0_Chr6g0278481 Rosa chinensis HOM05D006047 ORTHO05D007353 1.2e-33 146.7 136 63.2
MBI16_g27295_MAGBIO Magnolia biondii HOM05D006047 ORTHO05D007353 1.6e-33 146.4 136 60.3
MD10G1125900 Malus domestica HOM05D006047 ORTHO05D007353 2.1e-33 146.0 142 62.0
Ah.01g023100 Amaranthus hybridus HOM05D006047 ORTHO05D007353 3.6e-33 145.2 133 57.9
MD05G1123100 Malus domestica HOM05D006047 ORTHO05D007353 3.6e-33 145.2 141 60.3
Glyma.09G245500 Glycine max HOM05D006047 ORTHO05D007353 4.7e-33 144.8 135 58.5
Rhsim05G0054100 Rhododendron simsii HOM05D006047 ORTHO05D007353 4.7e-33 144.8 145 59.3
AUR62010029 Chenopodium quinoa HOM05D006047 ORTHO05D007353 6.2e-33 144.4 133 57.9
AUR62013019 Chenopodium quinoa HOM05D006047 ORTHO05D007353 8.1e-33 144.1 133 58.6
vmacro17314 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 8.1e-33 144.1 144 57.6
Prupe.8G167000 Prunus persica HOM05D006047 ORTHO05D007353 1.1e-32 143.7 142 59.9
FvH4_2g15480 Fragaria vesca HOM05D006047 ORTHO05D007353 1.4e-32 143.3 136 62.5
FAN24G2638 Fragaria x ananassa HOM05D006047 ORTHO05D007353 1.4e-32 143.3 136 62.5
TAR625G1286 Trochodendron aralioides HOM05D006047 ORTHO05D007353 1.4e-32 143.3 139 56.1
TAR625G1483 Trochodendron aralioides HOM05D006047 ORTHO05D007353 1.4e-32 143.3 139 56.1
HanXRQChr10g0300821 Helianthus annuus HOM05D006047 ORTHO05D007353 1.8e-32 142.9 130 64.6
Nn6g31863 Nelumbo nucifera HOM05D006047 ORTHO05D007353 1.8e-32 142.9 142 57.7
Solyc03g044590.2 Solanum lycopersicum HOM05D006047 ORTHO05D007353 1.8e-32 142.9 134 58.2
Cpa.g.sc20.97 Carica papaya HOM05D006047 ORTHO05D007353 2.4e-32 142.5 155 54.2
Manes.11G097000 Manihot esculenta HOM05D006047 ORTHO05D007353 2.4e-32 142.5 145 57.2
PGR042G1307 Punica granatum HOM05D006047 ORTHO05D007353 2.4e-32 142.5 151 55.6
FAN20G3211 Fragaria x ananassa HOM05D006047 ORTHO05D007353 3.1e-32 142.1 137 62.0
VMungo1383G0342 Vigna mungo HOM05D006047 ORTHO05D007353 3.1e-32 142.1 133 58.6
CANSAT21G1105 Cannabis sativa HOM05D006047 ORTHO05D007353 5.2e-32 141.4 143 57.3
FAN15G3104 Fragaria x ananassa HOM05D006047 ORTHO05D007353 5.2e-32 141.4 140 60.7
FAN27G2596 Fragaria x ananassa HOM05D001601 ORTHO05D002628 5.2e-32 141.4 132 62.9
Gohir.D02G226700 Gossypium hirsutum HOM05D006047 ORTHO05D007353 5.2e-32 141.4 144 54.2
Gorai.005G254600 Gossypium raimondii HOM05D006047 ORTHO05D007353 5.2e-32 141.4 144 54.2
PSO063G4836 Papaver somniferum HOM05D006047 ORTHO05D007353 5.2e-32 141.4 149 53.7
Potri.009G136100 Populus trichocarpa HOM05D006047 ORTHO05D007353 5.2e-32 141.4 146 57.5
HPP92_012949 Vanilla planifolia HOM05D006047 ORTHO05D007353 5.2e-32 141.4 151 54.3
DCAR_003178 Daucus carota HOM05D006047 ORTHO05D007353 6.9e-32 141.0 137 59.9
Ciclev10029458m.g Citrus clementina HOM05D006047 ORTHO05D007353 8.9e-32 140.6 158 53.2
HanXRQChr12g0374651 Helianthus annuus HOM05D006047 ORTHO05D007353 1.2e-31 140.2 134 61.2
PSO782G4934 Papaver somniferum HOM05D006047 ORTHO05D007353 1.2e-31 140.2 150 53.3
vmacro17313 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 1.2e-31 140.2 143 56.6
Ca_08043_v3 Cicer arietinum L. HOM05D006047 ORTHO05D007353 1.5e-31 139.8 133 57.9
Gohir.A03G205400 Gossypium hirsutum HOM05D006047 ORTHO05D007353 1.5e-31 139.8 146 54.8
ATR0064G037 Amborella trichopoda HOM05D006047 ORTHO05D007353 3.4e-31 138.7 149 55.0
Glyma.18G247500 Glycine max HOM05D006047 ORTHO05D007353 3.4e-31 138.7 135 57.8
Sed0000957 Sechium edule HOM05D006047 ORTHO05D007353 5.8e-31 137.9 130 56.9
Psat3g100240 Pisum sativum HOM05D006047 ORTHO05D007353 7.6e-31 137.5 133 55.6
SHI05754 Sapria himalayana HOM05D006047 ORTHO05D007353 7.6e-31 137.5 132 56.1
TPR.G32107 Trifolium pratense HOM05D006047 ORTHO05D007353 7.6e-31 137.5 135 55.6
CiPaw.06G121100 Carya illinoinensis HOM05D006047 ORTHO05D007353 9.9e-31 137.1 143 53.8
Lsat_1_v5_gn_4_71821 Lactuca sativa HOM05D006047 ORTHO05D007353 1.3e-30 136.7 139 59.0
Lj1g0011713 Lotus japonicus HOM05D006047 ORTHO05D007353 1.7e-30 136.3 133 55.6
Cfa005258 Carpinus fangiana HOM05D006047 ORTHO05D007353 2.2e-30 136.0 144 54.9
CiPaw.05G083500 Carya illinoinensis HOM05D006047 ORTHO05D007353 2.2e-30 136.0 143 58.0
Atru.chr5.3378 Acer truncatum HOM05D006047 ORTHO05D007353 2.9e-30 135.6 156 51.3
Lalb_Chr01g0021661 Lupinus albus HOM05D006047 ORTHO05D007353 3.8e-30 135.2 133 56.4
Phvul.008G049800 Phaseolus vulgaris HOM05D006047 ORTHO05D007353 6.4e-30 134.4 137 53.3
Medtr7g081070 Medicago truncatula HOM05D006047 ORTHO05D007353 1.1e-29 133.7 133 54.9
Aa31LG6G16610 Aethionema arabicum HOM05D006047 ORTHO05D007353 1.4e-29 133.3 137 52.6
Sed0015003 Sechium edule HOM05D006047 ORTHO05D007353 1.9e-29 132.9 141 52.5
AT2G20940 Arabidopsis thaliana HOM05D006047 ORTHO05D007353 2.4e-29 132.5 131 55.7
MELO3C020826.2 Cucumis melo HOM05D006047 ORTHO05D007353 2.4e-29 132.5 137 51.8
ClCG02G012010 Citrullus lanatus HOM05D006047 ORTHO05D007353 3.2e-29 132.1 137 54.7
AL4G10070 Arabidopsis lyrata HOM05D006047 ORTHO05D007353 4.2e-29 131.7 131 55.0
Eucgr.G01785 Eucalyptus grandis HOM05D006047 ORTHO05D007353 5.4e-29 131.3 150 52.0
Lalb_Chr19g0126421 Lupinus albus HOM05D006047 ORTHO05D007353 7.1e-29 131.0 133 52.6
Actinidia32040 Actinidia chinensis HOM05D006047 ORTHO05D007353 1.2e-28 130.2 120 61.7
CsaV3_2G016180 Cucumis sativus L. HOM05D006047 ORTHO05D007353 1.2e-28 130.2 136 53.7
ECA234G0646 Erigeron canadensis HOM05D006047 ORTHO05D000476 1.6e-28 129.8 132 59.8
Sp4g00130 Schrenkiella parvula HOM05D006047 ORTHO05D007353 1.6e-28 129.8 131 55.7
CDE02G0256 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 2.7e-28 129.0 130 56.9
Sabra09G0105700 Salix brachista HOM05D006047 ORTHO05D007353 2.7e-28 129.0 133 57.9
Actinidia39157 Actinidia chinensis HOM05D006047 ORTHO05D007353 3.5e-28 128.6 119 59.7
CSS0028471 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 3.5e-28 128.6 150 54.0
THA.LOC104824759 Tarenaya hassleriana HOM05D006047 ORTHO05D007353 3.5e-28 128.6 135 54.1
Haze_02125 Corylus avellana HOM05D006047 ORTHO05D007353 4.6e-28 128.3 143 51.7
Thhalv10000376m.g Eutrema salsugineum HOM05D006047 ORTHO05D007353 1.0e-27 127.1 132 53.0
Carub.0004s0003 Capsella rubella HOM05D006047 ORTHO05D007353 1.3e-27 126.7 131 53.4
Duzib248G0446 Durio zibethinus HOM05D006047 ORTHO05D007353 1.3e-27 126.7 143 53.1
CARHR174220 Cardamine hirsuta HOM05D006047 ORTHO05D007353 2.3e-27 125.9 134 52.2
Actinidia21466 Actinidia chinensis HOM05D006047 ORTHO05D007353 3.9e-27 125.2 124 58.1
TWI31G0769 Tripterygium wilfordii HOM05D006047 ORTHO05D007353 5.1e-27 124.8 140 52.9
Zm00001eb331780 Zea mays HOM05D006047 ORTHO05D007353 1.5e-26 123.2 146 53.4
AagrBONN_evm.TU.Sc2ySwM_362.1962 Anthoceros agrestis HOM05D006047 ORTHO05D007353 1.9e-26 122.9 131 55.0
Lsat_1_v5_gn_8_123180 Lactuca sativa HOM05D006047 ORTHO05D007353 3.3e-26 122.1 131 55.7
A04p15840 Brassica napus HOM05D006047 ORTHO05D007353 4.3e-26 121.7 130 50.0
C04p50240 Brassica napus HOM05D006047 ORTHO05D007353 4.3e-26 121.7 130 50.0
BolC4t26624H Brassica oleracea HOM05D006047 ORTHO05D007353 4.3e-26 121.7 130 50.0
BraA04t17215Z Brassica rapa HOM05D006047 ORTHO05D007353 4.3e-26 121.7 130 50.0
BcaB06g27764 Brassica carinata HOM05D006047 ORTHO05D007353 7.3e-26 120.9 130 50.0
Zm00001eb103880 Zea mays HOM05D006047 ORTHO05D007353 4.8e-25 118.2 144 51.4
Nitab4.5_0000283g0480 Nicotiana tabacum HOM05D006047 ORTHO05D007353 3.4e-23 112.1 149 48.3
QL11p050986 Quercus lobata HOM05D006047 ORTHO05D007353 7.6e-23 110.9 140 50.0
Pp3c24_20200 Physcomitrium patens HOM05D006047 ORTHO05D007353 3.8e-22 108.6 133 51.1
Sopen11g011060 Solanum pennellii HOM05D011435 ORTHO05D012656 1.1e-21 107.1 125 50.4
MD05G1195600 Malus domestica HOM05D006047 ORTHO05D007353 4.2e-21 105.1 131 50.4
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 7.1e-21 104.4 133 48.1
SEGI_27161 Sequoiadendron giganteum HOM05D006047 ORTHO05D007353 9.3e-21 104.0 111 57.7
BcaB01g02958 Brassica carinata HOM05D006047 ORTHO05D007353 1.0e-19 100.5 131 44.3
CDE04G1108 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 3.9e-19 98.6 111 53.2
Nitab4.5_0003914g0120 Nicotiana tabacum HOM05D006047 ORTHO05D007353 4.3e-18 95.1 127 50.4
SMO367G0473 Selaginella moellendorffii HOM05D006047 ORTHO05D007353 1.6e-17 93.2 142 43.7
PGR083G0073 Punica granatum HOM05D006047 ORTHO05D007353 6.4e-14 81.3 131 42.0
SalBow5G2603 Salvia bowleyana HOM05D006047 ORTHO05D007353 1.4e-13 80.1 101 46.5
CAN.G588.87 Capsicum annuum HOM05D006047 ORTHO05D007353 1.9e-13 79.7 68 60.3
BcaC01g04858 Brassica carinata HOM05D006047 ORTHO05D007353 1.6e-09 66.6 131 34.4
HPP92_025899 Vanilla planifolia HOM05D006047 ORTHO05D007353 3.7e-09 65.5 48 60.4
Sed0021144 Sechium edule HOM05D006047 ORTHO05D007353 4.8e-09 65.1 65 52.3
Sed0002860 Sechium edule HOM05D006047 ORTHO05D007353 6.9e-08 61.2 60 50.0
Zm00001eb046330 Zea mays HOM05D001486 ORTHO05D036446 4.9e-06 55.1 103 39.8
Cre01.g031250 Chlamydomonas reinhardtii HOM05D006047 ORTHO05D007353 8.4e-06 54.3 120 32.5


User provided reference genes

Program Settings