Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_52.g17177 Utricularia gibba HOM05D005895 ORTHO05D007916 3.7e-312 1073.9 543 100.0
Migut.E00194 Erythranthe guttata HOM05D005895 ORTHO05D007916 5.6e-218 761.1 578 69.0
SalBow8G2958 Salvia bowleyana HOM05D005895 ORTHO05D007916 2.9e-214 748.8 580 67.2
Solyc04g025540.3 Solanum lycopersicum HOM05D005895 ORTHO05D007916 3.9e-203 711.8 561 67.4
Sopen04g012770 Solanum pennellii HOM05D005895 ORTHO05D007916 3.3e-202 708.8 561 66.8
GSVIVG01004086001 Vitis vinifera HOM05D005895 ORTHO05D007916 2.1e-201 706.1 541 67.5
MSTRG.2417 Avicennia marina HOM05D005895 ORTHO05D007916 6.2e-201 704.5 447 78.3
CSS0018548 Camellia sinensis var. sinensis HOM05D005895 ORTHO05D007916 1.8e-200 703.0 518 69.5
TAR371G0306 Trochodendron aralioides HOM05D005895 ORTHO05D007916 3.1e-200 702.2 567 65.4
Lj6A811T72 Lonicera japonica HOM05D005895 ORTHO05D007916 5.3e-200 701.4 520 68.7
MBI10_g00734_MAGBIO Magnolia biondii HOM05D005895 ORTHO05D007916 1.7e-198 696.4 563 64.7
Potri.010G044900 Populus trichocarpa HOM05D005895 ORTHO05D007916 1.9e-197 693.0 520 68.7
MELO3C011963.2 Cucumis melo HOM05D005895 ORTHO05D007916 4.2e-197 691.8 516 69.4
CAN.G7.20 Capsicum annuum HOM05D005895 ORTHO05D007916 9.3e-197 690.6 474 74.1
Sabra10G0023200 Salix brachista HOM05D005895 ORTHO05D007916 1.2e-196 690.3 534 66.5
CsaV3_5G031240 Cucumis sativus L. HOM05D005895 ORTHO05D007916 1.6e-196 689.9 516 69.6
Actinidia27801 Actinidia chinensis HOM05D005895 ORTHO05D007916 2.1e-196 689.5 518 68.1
DCAR_007061 Daucus carota HOM05D005895 ORTHO05D007916 3.5e-196 688.7 539 66.8
COL.COLO4_24246 Corchorus olitorius HOM05D005895 ORTHO05D007916 1.0e-195 687.2 541 66.4
Cfa009199 Carpinus fangiana HOM05D005895 ORTHO05D007916 1.3e-195 686.8 556 63.7
QL03p058522 Quercus lobata HOM05D005895 ORTHO05D007916 1.8e-195 686.4 541 65.6
Eucgr.H02516 Eucalyptus grandis HOM05D005895 ORTHO05D007916 3.0e-195 685.6 518 67.6
Nitab4.5_0006332g0030 Nicotiana tabacum HOM05D005895 ORTHO05D007916 3.9e-195 685.3 530 66.8
ECA233G5390 Erigeron canadensis HOM05D005895 ORTHO05D007916 6.7e-195 684.5 518 68.0
Thecc.02G257400 Theobroma cacao HOM05D005895 ORTHO05D007916 6.7e-195 684.5 516 68.0
Haze_12237 Corylus avellana HOM05D005895 ORTHO05D007916 8.7e-195 684.1 519 66.3
Gorai.012G172600 Gossypium raimondii HOM05D005895 ORTHO05D007916 1.9e-194 682.9 543 64.8
TWI36G0590 Tripterygium wilfordii HOM05D005895 ORTHO05D007916 2.5e-194 682.6 540 66.3
CiPaw.05G183400 Carya illinoinensis HOM05D005895 ORTHO05D007916 3.3e-194 682.2 518 67.0
Gohir.A04G136400 Gossypium hirsutum HOM05D005895 ORTHO05D007916 3.3e-194 682.2 543 64.6
Sed0023548 Sechium edule HOM05D005895 ORTHO05D007916 3.3e-194 682.2 518 68.9
FvH4_4g25910 Fragaria vesca HOM05D005895 ORTHO05D007916 2.8e-193 679.1 566 63.1
TPR.G34672 Trifolium pratense HOM05D005895 ORTHO05D007916 4.8e-193 678.3 519 66.1
RcHm_v2.0_Chr4g0433361 Rosa chinensis HOM05D005895 ORTHO05D007916 8.2e-193 677.6 572 62.2
PGR119G2505 Punica granatum HOM05D005895 ORTHO05D007916 4.1e-192 675.2 519 67.2
FAN07G1086 Fragaria x ananassa HOM05D005895 ORTHO05D007916 1.2e-191 673.7 566 62.5
MD13G1098000 Malus domestica HOM05D005895 ORTHO05D007916 1.2e-191 673.7 528 65.2
Atru.chr11.2133 Acer truncatum HOM05D005895 ORTHO05D007916 1.5e-191 673.3 542 64.4
Ah.03g133150 Amaranthus hybridus HOM05D005895 ORTHO05D007916 1.5e-191 673.3 558 63.8
Cc04_g11160 Coffea canephora HOM05D005895 ORTHO05D007916 2.6e-191 672.5 473 71.9
arahy.Tifrunner.gnm1.ann1.LQ91H7 Arachis hypogaea HOM05D005895 ORTHO05D007916 4.5e-191 671.8 519 66.7
Medtr8g069525 Medicago truncatula HOM05D005895 ORTHO05D007916 4.5e-191 671.8 540 63.9
Ciclev10030909m.g Citrus clementina HOM05D005895 ORTHO05D007916 7.7e-191 671.0 556 63.5
CANSAT01G2589 Cannabis sativa HOM05D005895 ORTHO05D007916 1.0e-190 670.6 520 65.8
Atru.chr11.2117 Acer truncatum HOM05D005895 ORTHO05D007916 1.3e-190 670.2 542 64.2
Lalb_Chr05g0228401 Lupinus albus HOM05D005895 ORTHO05D007916 1.3e-190 670.2 571 61.6
Prupe.1G247400 Prunus persica HOM05D005895 ORTHO05D007916 1.7e-190 669.8 519 65.7
Cpa.g.sc33.4 Carica papaya HOM05D005895 ORTHO05D007916 2.2e-190 669.5 529 65.8
Lj4g0008127 Lotus japonicus HOM05D005895 ORTHO05D007916 2.2e-190 669.5 518 66.2
MD16G1098900 Malus domestica HOM05D005895 ORTHO05D007916 3.8e-190 668.7 528 64.0
vmacro01130 Vaccinium macrocarpon HOM05D005895 ORTHO05D007916 3.8e-190 668.7 558 63.4
AUR62005446 Chenopodium quinoa HOM05D005895 ORTHO05D007916 1.4e-189 666.8 564 62.9
FAN12G1268 Fragaria x ananassa HOM05D005895 ORTHO05D007916 1.9e-189 666.4 566 62.4
FAN17G0264 Fragaria x ananassa HOM05D005895 ORTHO05D007916 2.5e-189 666.0 571 61.3
AUR62024296 Chenopodium quinoa HOM05D005895 ORTHO05D007916 3.2e-189 665.6 552 63.9
FAN12G2739 Fragaria x ananassa HOM05D005895 ORTHO05D007916 4.2e-189 665.2 563 62.5
Glyma.08G283100 Glycine max HOM05D005895 ORTHO05D007916 2.7e-188 662.5 518 65.1
Hund06020 Selenicereus undatus HOM05D005895 ORTHO05D007916 3.6e-188 662.1 472 71.0
Gorai.005G179700 Gossypium raimondii HOM05D005895 ORTHO05D007916 6.1e-188 661.4 517 65.8
Thhalv10018314m.g Eutrema salsugineum HOM05D005895 ORTHO05D007916 1.4e-187 660.2 539 63.1
Gohir.D04G179500 Gossypium hirsutum HOM05D005895 ORTHO05D007916 1.4e-187 660.2 531 64.8
CARHR063780 Cardamine hirsuta HOM05D005895 ORTHO05D007916 2.3e-187 659.4 539 63.6
THA.LOC104822982 Tarenaya hassleriana HOM05D005895 ORTHO05D007916 2.3e-187 659.4 563 62.2
Aqoxy5G03807 Aquilegia oxysepala HOM05D005895 ORTHO05D007916 3.9e-187 658.7 519 66.9
Sc04g0009430 Simmondsia chinensis HOM05D005895 ORTHO05D007916 5.1e-187 658.3 531 65.2
VMungo0251G0514 Vigna mungo HOM05D005895 ORTHO05D007916 1.1e-186 657.1 518 64.3
AL2G29960 Arabidopsis lyrata HOM05D005895 ORTHO05D007916 1.5e-186 656.8 539 63.1
HanXRQChr08g0208071 Helianthus annuus HOM05D005895 ORTHO05D007916 2.0e-186 656.4 518 65.8
EL10Ac6g13787 Beta vulgaris HOM05D005895 ORTHO05D007916 2.5e-186 656.0 540 64.8
AT1G70570 Arabidopsis thaliana HOM05D005895 ORTHO05D007916 4.3e-186 655.2 539 63.5
Carub.0002s1729 Capsella rubella HOM05D005895 ORTHO05D007916 4.3e-186 655.2 539 63.1
Sp5g25720 Schrenkiella parvula HOM05D005895 ORTHO05D007916 2.2e-185 652.9 588 59.9
PSO017G6602 Papaver somniferum HOM05D005895 ORTHO05D007916 2.8e-185 652.5 547 64.0
PSO478G2260 Papaver somniferum HOM05D005895 ORTHO05D007916 1.1e-184 650.6 547 63.8
Lsat_1_v5_gn_8_150700 Lactuca sativa HOM05D005895 ORTHO05D007916 3.1e-184 649.0 571 62.0
Phvul.003G063900 Phaseolus vulgaris HOM05D005895 ORTHO05D007916 4.1e-184 648.7 462 69.5
A02p16660 Brassica napus HOM05D005895 ORTHO05D007916 1.5e-183 646.7 540 63.0
BraA02t06722Z Brassica rapa HOM05D005895 ORTHO05D007916 2.6e-183 646.0 540 63.0
BcaB05g24593 Brassica carinata HOM05D005895 ORTHO05D007916 4.5e-183 645.2 539 62.7
Aa31LG4G10380 Aethionema arabicum HOM05D005895 ORTHO05D007916 5.9e-183 644.8 564 60.6
C02p27920 Brassica napus HOM05D005895 ORTHO05D007916 2.9e-182 642.5 540 62.8
BolC2t08837H Brassica oleracea HOM05D005895 ORTHO05D007916 2.9e-182 642.5 540 62.8
Aqoxy3G01161 Aquilegia oxysepala HOM05D005895 ORTHO05D007916 4.7e-180 635.2 531 63.3
Nitab4.5_0000370g0030 Nicotiana tabacum HOM05D005895 ORTHO05D007916 1.0e-179 634.0 533 63.0
HPP92_003081 Vanilla planifolia HOM05D005895 ORTHO05D007916 5.1e-179 631.7 560 61.6
FAN22G0931 Fragaria x ananassa HOM05D005895 ORTHO05D007916 2.0e-178 629.8 573 59.2
BcaC03g15207 Brassica carinata HOM05D005895 ORTHO05D007916 2.6e-178 629.4 529 62.9
Os02g0131200 Oryza sativa ssp. japonica HOM05D005895 ORTHO05D007916 9.7e-178 627.5 517 62.9
Gohir.D02G159600 Gossypium hirsutum HOM05D005895 ORTHO05D007916 3.1e-176 622.5 517 63.1
Zm00001eb231230 Zea mays HOM05D005895 ORTHO05D007916 4.2e-173 612.1 519 61.8
ClCG05G025660 Citrullus lanatus HOM05D005895 ORTHO05D007916 5.2e-171 605.1 516 64.1
Nn4g22655 Nelumbo nucifera HOM05D005895 ORTHO05D007916 5.2e-171 605.1 545 59.6
Mapoly0129s0050 Marchantia polymorpha HOM05D005895 ORTHO05D007916 1.9e-165 586.6 475 64.2
ATR0585G083 Amborella trichopoda HOM05D005895 ORTHO05D007916 9.4e-165 584.3 478 65.1
Manes.12G024300 Manihot esculenta HOM05D005895 ORTHO05D007916 8.8e-163 577.8 446 67.5
Oeu059911.1 Olea europaea HOM05D005895 ORTHO05D007916 2.2e-161 573.2 565 58.2
arahy.Tifrunner.gnm1.ann1.0I87EX Arachis hypogaea HOM05D005895 ORTHO05D007916 2.4e-160 569.7 449 65.7
Psat0s3772g0040 Pisum sativum HOM05D005895 ORTHO05D007916 1.6e-159 567.0 474 62.0
Ca_22578_v3 Cicer arietinum L. HOM05D005895 ORTHO05D007916 5.0e-158 562.0 486 60.1
Pp3c12_14340 Physcomitrium patens HOM05D005895 ORTHO05D007916 3.6e-156 555.8 477 61.2
Manes.13G025800 Manihot esculenta HOM05D005895 ORTHO05D007916 2.3e-155 553.1 446 65.2
SMO119G0060 Selaginella moellendorffii HOM05D005895 ORTHO05D007916 6.6e-150 535.0 472 59.5
Gohir.A03G136300 Gossypium hirsutum HOM05D005895 ORTHO05D007916 8.6e-150 534.6 514 57.6
Sed0009772 Sechium edule HOM05D005895 ORTHO05D007916 1.8e-147 526.9 416 67.8
THA.LOC104818151 Tarenaya hassleriana HOM05D005895 ORTHO05D007916 2.4e-144 516.5 474 58.9
Zm00001eb209010 Zea mays HOM05D005895 ORTHO05D007916 4.1e-144 515.8 517 54.2
Duzib251G0200 Durio zibethinus HOM05D005895 ORTHO05D007916 3.9e-142 509.2 550 52.5
Peaxi162Scf01242g00143 Petunia axillaris HOM05D005895 ORTHO05D007916 1.3e-137 494.2 375 67.5
AagrBONN_evm.TU.Sc2ySwM_368.1304 Anthoceros agrestis HOM05D005895 ORTHO05D007916 4.6e-135 485.7 410 61.2
Dinv24803 Davidia involucrata HOM05D005895 ORTHO05D007916 2.3e-118 430.3 348 64.9
Pp3c10_19590 Physcomitrium patens HOM05D005895 ORTHO05D007916 4.0e-91 339.7 293 60.4
SHI17741 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-79 301.6 252 63.5
FAN18G3006 Fragaria x ananassa HOM05D005895 ORTHO05D007916 4.3e-77 293.1 200 71.0
CBR_g37586 Chara braunii HOM05D000019 ORTHO05D000048 2.0e-58 231.1 274 47.4
CBR_g37584 Chara braunii HOM05D000019 ORTHO05D000048 1.6e-50 204.9 197 51.3
Peaxi162Scf02256g00001 Petunia axillaris HOM05D005895 ORTHO05D007916 2.1e-47 194.5 144 69.4
SEGI_05407 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 1.0e-46 192.2 143 66.4
SEGI_24305 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 9.8e-37 159.1 96 76.0
SEGI_08481 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 7.7e-34 149.4 101 68.3
BcaB08g34808 Brassica carinata HOM05D005895 ORTHO05D007916 1.0e-33 149.1 100 69.0
SMO163G0072 Selaginella moellendorffii HOM05D005895 ORTHO05D007916 1.0e-22 112.5 177 40.7
DCAR_028023 Daucus carota HOM05D005895 ORTHO05D007916 5.8e-21 106.7 108 58.3
Rhsim12G0041200 Rhododendron simsii HOM05D005895 ORTHO05D007916 2.4e-19 101.3 70 67.1
Ah.07g201790 Amaranthus hybridus HOM05D005895 ORTHO05D007916 7.0e-19 99.8 66 74.2
BcaB05g24594 Brassica carinata HOM05D005895 ORTHO05D012801 7.0e-19 99.8 72 68.1
A02p16670 Brassica napus HOM05D005895 ORTHO05D012801 8.6e-17 92.8 65 69.2
BraA02t06723Z Brassica rapa HOM05D005895 ORTHO05D012801 8.6e-17 92.8 65 69.2
C02p27930 Brassica napus HOM05D005895 ORTHO05D012801 3.3e-16 90.9 68 66.2
BolC2t08838H Brassica oleracea HOM05D005895 ORTHO05D012801 3.3e-16 90.9 68 66.2
DCAR_029453 Daucus carota HOM05D005895 ORTHO05D007916 1.3e-12 79.0 68 63.2


User provided reference genes

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