Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_52.g17163 Utricularia gibba HOM05D001536 ORTHO05D001442 1.3e-131 473.0 233 100.0
unitig_62.g23693 Utricularia gibba HOM05D001536 ORTHO05D001442 3.3e-82 308.9 229 67.7
Oeu016231.1 Olea europaea HOM05D001536 ORTHO05D001442 1.3e-22 110.9 257 34.6
MSTRG.2324 Avicennia marina HOM05D001536 ORTHO05D001442 1.7e-22 110.5 243 34.2
unitig_21.g20860 Utricularia gibba HOM05D001536 ORTHO05D001442 3.8e-22 109.4 215 35.8
SalBow2G1415 Salvia bowleyana HOM05D001536 ORTHO05D001442 1.9e-21 107.1 256 34.4
MSTRG.13440 Avicennia marina HOM05D001536 ORTHO05D001442 4.2e-21 105.9 213 35.7
Dinv16702 Davidia involucrata HOM05D001536 ORTHO05D001442 1.0e-19 101.3 268 32.5
Oeu021094.1 Olea europaea HOM05D001536 ORTHO05D001442 1.8e-19 100.5 255 32.5
MSTRG.7767 Avicennia marina HOM05D001536 ORTHO05D001442 5.3e-16 89.0 252 31.0
Migut.E00063 Erythranthe guttata HOM05D001536 ORTHO05D001442 2.6e-15 86.7 233 31.8
CSS0003937 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 3.5e-15 86.3 274 31.8
SalBow8G2082 Salvia bowleyana HOM05D001536 ORTHO05D001442 1.0e-14 84.7 258 31.8
Actinidia12316 Actinidia chinensis HOM05D001536 ORTHO05D001442 1.7e-14 84.0 270 31.5
Gohir.A13G079800 Gossypium hirsutum HOM05D001536 ORTHO05D001442 1.7e-14 84.0 242 29.8
unitig_22.g5554 Utricularia gibba HOM05D001536 ORTHO05D001442 1.1e-13 81.3 227 33.0
Thecc.02G336800 Theobroma cacao HOM05D001536 ORTHO05D001442 1.5e-13 80.9 250 31.2
Gohir.D13G079500 Gossypium hirsutum HOM05D001536 ORTHO05D001442 2.5e-13 80.1 249 28.9
Duzib268G0567 Durio zibethinus HOM05D001536 ORTHO05D001442 3.2e-13 79.7 268 28.7
CSS0012767 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 4.2e-13 79.3 267 31.1
Dinv34112 Davidia involucrata HOM05D001536 ORTHO05D001442 4.2e-13 79.3 266 30.5
Gorai.013G090900 Gossypium raimondii HOM05D001536 ORTHO05D001442 1.2e-12 77.8 247 29.1
MSTRG.727 Avicennia marina HOM05D001536 ORTHO05D001442 3.6e-12 76.3 264 27.3
Cc11_g12410 Coffea canephora HOM05D001536 ORTHO05D001442 1.0e-11 74.7 262 29.4
CSS0031318 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 5.2e-11 72.4 250 29.2
CSS0031748 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 5.2e-11 72.4 250 29.2
TAR622G0794 Trochodendron aralioides HOM05D001536 ORTHO05D001442 6.7e-11 72.0 219 32.0
Oeu028260.1 Olea europaea HOM05D001536 ORTHO05D001442 1.5e-10 70.9 252 31.7
Gohir.D05G305900 Gossypium hirsutum HOM05D001536 ORTHO05D001442 2.6e-10 70.1 247 27.9
Rhsim12G0077000 Rhododendron simsii HOM05D001536 ORTHO05D001442 3.3e-10 69.7 231 32.0
Gohir.D12G165600 Gossypium hirsutum HOM05D001536 ORTHO05D001442 5.7e-10 68.9 260 30.0
Actinidia31950 Actinidia chinensis HOM05D001536 ORTHO05D000003 9.7e-10 68.2 250 29.6
Gorai.009G325900 Gossypium raimondii HOM05D001536 ORTHO05D001442 9.7e-10 68.2 250 28.0
Duzib248G0148 Durio zibethinus HOM05D001536 ORTHO05D001442 1.3e-09 67.8 236 28.8
Prupe.1G281700 Prunus persica HOM05D001536 ORTHO05D001442 1.7e-09 67.4 268 26.1
Gohir.A05G305900 Gossypium hirsutum HOM05D001536 ORTHO05D001442 2.2e-09 67.0 247 28.3
Gorai.008G178300 Gossypium raimondii HOM05D001536 ORTHO05D001442 2.2e-09 67.0 265 29.4
Manes.05G107500 Manihot esculenta HOM05D001536 ORTHO05D001442 3.7e-09 66.2 224 29.0
Haze_11937 Corylus avellana HOM05D001536 ORTHO05D001442 4.8e-09 65.9 268 28.0
Sabra10G0123100 Salix brachista HOM05D001536 ORTHO05D001442 6.3e-09 65.5 215 29.8
Potri.010G162000 Populus trichocarpa HOM05D001536 ORTHO05D001442 1.1e-08 64.7 229 30.6
RcHm_v2.0_Chr4g0438891 Rosa chinensis HOM05D001536 ORTHO05D001442 1.1e-08 64.7 221 30.8
FAN12G2957 Fragaria x ananassa HOM05D001536 ORTHO05D001442 1.4e-08 64.3 266 28.2
FAN17G0931 Fragaria x ananassa HOM05D001536 ORTHO05D001442 1.4e-08 64.3 267 27.7
Lj6A782T115 Lonicera japonica HOM05D001536 ORTHO05D001442 1.4e-08 64.3 241 29.0
FvH4_4g30520 Fragaria vesca HOM05D001536 ORTHO05D001442 1.8e-08 63.9 266 27.8
Gohir.A12G162600 Gossypium hirsutum HOM05D001536 ORTHO05D001442 1.8e-08 63.9 237 29.1
FAN07G0538 Fragaria x ananassa HOM05D001536 ORTHO05D001442 2.4e-08 63.5 265 27.2
Migut.L01226 Erythranthe guttata HOM05D001536 ORTHO05D001442 3.1e-08 63.2 183 30.1
FAN22G0581 Fragaria x ananassa HOM05D001536 ORTHO05D001442 4.1e-08 62.8 268 28.4
QL03p070806 Quercus lobata HOM05D001536 ORTHO05D001442 5.3e-08 62.4 219 31.1
Rhsim12G0134000 Rhododendron simsii HOM05D001536 ORTHO05D001442 7.0e-08 62.0 235 27.2
MD16G1065200 Malus domestica HOM05D001536 ORTHO05D001442 1.2e-07 61.2 247 26.3
Atru.chr11.1694 Acer truncatum HOM05D001536 ORTHO05D001442 1.6e-07 60.8 214 29.4
TAR629G1896 Trochodendron aralioides HOM05D001536 ORTHO05D001442 2.0e-07 60.5 207 30.0
vmacro16367 Vaccinium macrocarpon HOM05D001536 ORTHO05D001442 2.0e-07 60.5 241 29.0
Glyma.20G027500 Glycine max HOM05D001536 ORTHO05D001442 7.7e-07 58.5 211 28.9
Manes.01G030700 Manihot esculenta HOM05D001536 ORTHO05D001442 2.9e-06 56.6 263 26.2
CiPaw.06G089900 Carya illinoinensis HOM05D001536 ORTHO05D001442 3.8e-06 56.2 270 27.4
Hma1.2p1_0354F.1_g133660 Hydrangea macrophylla HOM05D001536 ORTHO05D001442 3.8e-06 56.2 233 29.2
Lalb_Chr09g0329111 Lupinus albus HOM05D001536 ORTHO05D001442 3.8e-06 56.2 203 27.6
Lj3C1032T12 Lonicera japonica HOM05D001536 ORTHO05D001442 5.0e-06 55.8 199 27.6
PGSC0003DMG401028385 Solanum tuberosum HOM05D001536 ORTHO05D001442 5.0e-06 55.8 250 30.4
Potri.008G092800 Populus trichocarpa HOM05D001536 ORTHO05D001442 6.5e-06 55.5 213 27.2
Nitab4.5_0000014g0250 Nicotiana tabacum HOM05D001536 ORTHO05D001442 8.5e-06 55.1 264 26.9


User provided reference genes

Program Settings