Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_52.g17127 Utricularia gibba HOM05D006456 ORTHO05D007588 1.3e-112 409.8 226 100.0
Oeu027684.2 Olea europaea HOM05D006456 ORTHO05D007588 5.5e-58 228.4 232 57.3
Oeu014300.2 Olea europaea HOM05D006456 ORTHO05D007588 4.6e-57 225.3 232 56.9
Dinv31583 Davidia involucrata HOM05D006456 ORTHO05D007588 6.0e-57 224.9 229 58.1
MSTRG.2210 Avicennia marina HOM05D006456 ORTHO05D007588 1.8e-56 223.4 232 57.3
Rhsim12G0086900 Rhododendron simsii HOM05D006456 ORTHO05D007588 1.3e-54 217.2 229 53.3
GSVIVG01011822001 Vitis vinifera HOM05D006456 ORTHO05D007588 1.4e-53 213.8 230 53.9
CSS0027890 Camellia sinensis var. sinensis HOM05D006456 ORTHO05D007588 2.0e-52 209.9 229 53.3
CiPaw.05G243600 Carya illinoinensis HOM05D006456 ORTHO05D007588 7.6e-52 208.0 231 52.8
SGA_v2.0_scaffold170G38812 Striga asiatica HOM05D006456 ORTHO05D007588 7.6e-52 208.0 247 52.2
Nn4g23975 Nelumbo nucifera HOM05D006456 ORTHO05D007588 5.0e-51 205.3 227 52.9
Prupe.1G318000 Prunus persica HOM05D006456 ORTHO05D007588 9.3e-50 201.1 230 51.7
QL01p003354 Quercus lobata HOM05D006456 ORTHO05D007588 9.3e-50 201.1 227 51.1
CAN.G99.9 Capsicum annuum HOM05D006456 ORTHO05D007588 3.5e-49 199.1 231 48.5
MD16G1036000 Malus domestica HOM05D006456 ORTHO05D007588 4.6e-49 198.7 224 51.8
CiPaw.06G016000 Carya illinoinensis HOM05D006456 ORTHO05D007588 3.0e-48 196.1 231 50.6
TAR629G3159 Trochodendron aralioides HOM05D006456 ORTHO05D007588 3.0e-48 196.1 225 50.2
vmacro01410 Vaccinium macrocarpon HOM05D006456 ORTHO05D007588 6.7e-48 194.9 229 51.5
DCAR_007270 Daucus carota HOM05D006456 ORTHO05D007588 8.7e-48 194.5 225 49.3
MD13G1034500 Malus domestica HOM05D006456 ORTHO05D007588 1.1e-47 194.1 224 51.3
Solyc03g013030.3 Solanum lycopersicum HOM05D006456 ORTHO05D007588 1.1e-47 194.1 233 45.9
Sopen03g020360 Solanum pennellii HOM05D006456 ORTHO05D007588 2.5e-47 193.0 233 46.4
Haze_00665 Corylus avellana HOM05D006456 ORTHO05D007588 3.3e-47 192.6 223 50.7
Nitab4.5_0001999g0020 Nicotiana tabacum HOM05D006456 ORTHO05D007588 3.3e-47 192.6 231 50.6
Manes.06G064100 Manihot esculenta HOM05D006456 ORTHO05D007588 3.7e-46 189.1 230 49.1
Aqoxy3G00186 Aquilegia oxysepala HOM05D006456 ORTHO05D007588 6.3e-46 188.3 227 48.5
Cc11_g09550 Coffea canephora HOM05D006456 ORTHO05D007588 1.5e-44 183.7 234 50.9
Lsat_1_v5_gn_3_56960 Lactuca sativa HOM05D006456 ORTHO05D007588 2.6e-44 183.0 228 50.0
CANSAT01G2803 Cannabis sativa HOM05D006456 ORTHO05D007588 1.3e-43 180.6 226 46.5
TWI75G0343 Tripterygium wilfordii HOM05D006456 ORTHO05D007588 2.2e-43 179.9 228 50.9
FAN17G0635 Fragaria x ananassa HOM05D006456 ORTHO05D007588 3.8e-43 179.1 221 48.4
Gohir.D05G316500 Gossypium hirsutum HOM05D006456 ORTHO05D007588 5.0e-43 178.7 227 46.7
Gorai.009G338700 Gossypium raimondii HOM05D006456 ORTHO05D007588 5.0e-43 178.7 227 46.7
ClCG05G022400 Citrullus lanatus HOM05D006456 ORTHO05D007588 6.5e-43 178.3 229 48.0
Glyma.10G269500 Glycine max HOM05D006456 ORTHO05D007588 6.5e-43 178.3 229 48.0
Hund25025 Selenicereus undatus HOM05D006456 ORTHO05D007588 8.5e-43 177.9 224 45.5
FvH4_4g26560 Fragaria vesca HOM05D006456 ORTHO05D007588 1.1e-42 177.6 221 47.5
Glyma.20G121600 Glycine max HOM05D006456 ORTHO05D007588 1.4e-42 177.2 229 48.5
MELO3C012283.2 Cucumis melo HOM05D006456 ORTHO05D007588 2.5e-42 176.4 230 45.7
Duzib248G0017 Durio zibethinus HOM05D006456 ORTHO05D007588 2.5e-42 176.4 227 46.3
MBI16_g14292_MAGBIO Magnolia biondii HOM05D006456 ORTHO05D007588 3.2e-42 176.0 226 50.4
Ciclev10016584m.g Citrus clementina HOM05D006456 ORTHO05D007588 5.5e-42 175.3 227 49.8
Thecc.02G220100 Theobroma cacao HOM05D006456 ORTHO05D007588 7.2e-42 174.9 222 45.0
Gohir.A05G315000 Gossypium hirsutum HOM05D006456 ORTHO05D007588 9.4e-42 174.5 227 45.4
Aa31sc140G50 Aethionema arabicum HOM05D006456 ORTHO05D007588 1.2e-41 174.1 226 44.2
CsaV3_5G034690 Cucumis sativus L. HOM05D006456 ORTHO05D007588 1.6e-41 173.7 228 46.5
Sed0027511 Sechium edule HOM05D006456 ORTHO05D007588 1.6e-41 173.7 232 48.3
Carub.0002s1467 Capsella rubella HOM05D006456 ORTHO05D007588 2.1e-41 173.3 227 44.1
FAN12G2031 Fragaria x ananassa HOM05D006456 ORTHO05D007588 2.1e-41 173.3 219 47.9
FAN07G1047 Fragaria x ananassa HOM05D006456 ORTHO05D008764 3.6e-41 172.6 220 47.7
FAN22G1705 Fragaria x ananassa HOM05D006456 ORTHO05D007588 4.6e-41 172.2 222 47.7
FAN12G0878 Fragaria x ananassa HOM05D006456 ORTHO05D007588 7.9e-41 171.4 220 47.7
Migut.E00381 Erythranthe guttata HOM05D006456 ORTHO05D007588 1.8e-40 170.2 129 68.2
Phvul.007G033000 Phaseolus vulgaris HOM05D006456 ORTHO05D007588 1.8e-40 170.2 223 45.3
CARHR060870 Cardamine hirsuta HOM05D006456 ORTHO05D007588 2.3e-40 169.9 225 44.9
Peaxi162Scf00520g00114 Petunia axillaris HOM05D006456 ORTHO05D007588 2.3e-40 169.9 169 53.8
C06p37830 Brassica napus HOM05D006456 ORTHO05D007588 3.0e-40 169.5 224 46.0
AT1G68185 Arabidopsis thaliana HOM05D006456 ORTHO05D007588 6.7e-40 168.3 226 42.5
PSO017G1436 Papaver somniferum HOM05D006456 ORTHO05D007588 8.8e-40 167.9 229 45.9
Thhalv10019127m.g Eutrema salsugineum HOM05D006456 ORTHO05D007588 3.3e-39 166.0 225 43.1
HanXRQChr15g0477811 Helianthus annuus HOM05D006456 ORTHO05D007588 5.7e-39 165.2 225 46.2
BcaC08g45988 Brassica carinata HOM05D006456 ORTHO05D007588 7.4e-39 164.9 223 45.3
Lj5g0005162 Lotus japonicus HOM05D006456 ORTHO05D007588 7.4e-39 164.9 225 43.6
Atru.chr11.273 Acer truncatum HOM05D006456 ORTHO05D007588 1.3e-38 164.1 230 44.3
CDE07G1334 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 1.3e-38 164.1 225 45.3
PSO478G4574 Papaver somniferum HOM05D006456 ORTHO05D007588 1.3e-38 164.1 225 45.3
THA.LOC104801669 Tarenaya hassleriana HOM05D006456 ORTHO05D007588 1.3e-38 164.1 227 45.4
Lalb_Chr17g0338791 Lupinus albus HOM05D006456 ORTHO05D007588 6.3e-38 161.8 226 42.9
A07p32110 Brassica napus HOM05D006456 ORTHO05D007588 8.2e-38 161.4 223 43.5
PGSC0003DMG400010378 Solanum tuberosum HOM05D006456 ORTHO05D007588 8.2e-38 161.4 176 50.6
BcaB03g15404 Brassica carinata HOM05D006456 ORTHO05D007588 1.8e-37 160.2 219 44.7
Lj6P752T19 Lonicera japonica HOM05D006456 ORTHO05D007588 1.8e-37 160.2 128 64.1
Sp5g23190 Schrenkiella parvula HOM05D006456 ORTHO05D007588 4.1e-37 159.1 238 42.0
Sc11g0003890 Simmondsia chinensis HOM05D006456 ORTHO05D007588 5.3e-37 158.7 271 39.5
Lalb_Chr10g0096361 Lupinus albus HOM05D006456 ORTHO05D007588 6.9e-37 158.3 227 44.1
ATR0053G055 Amborella trichopoda HOM05D006456 ORTHO05D007588 3.4e-36 156.0 229 42.4
PGR119G2311 Punica granatum HOM05D006456 ORTHO05D007588 3.4e-36 156.0 235 42.1
arahy.Tifrunner.gnm1.ann1.UW2YW6 Arachis hypogaea HOM05D006456 ORTHO05D007588 4.5e-36 155.6 224 44.6
AUR62014103 Chenopodium quinoa HOM05D006456 ORTHO05D007588 4.5e-36 155.6 232 45.3
RcHm_v2.0_Chr4g0434211 Rosa chinensis HOM05D006456 ORTHO05D007588 4.5e-36 155.6 221 49.8
AL2G27020 Arabidopsis lyrata HOM05D006456 ORTHO05D007588 5.9e-36 155.2 225 40.9
ECA246G1061 Erigeron canadensis HOM05D006456 ORTHO05D007588 5.9e-36 155.2 227 44.9
HanXRQChr17g0556631 Helianthus annuus HOM05D006456 ORTHO05D007588 5.9e-36 155.2 225 43.6
Medtr1g109370 Medicago truncatula HOM05D006456 ORTHO05D007588 7.7e-36 154.8 226 41.6
Ca_11124_v3 Cicer arietinum L. HOM05D006456 ORTHO05D007588 1.0e-35 154.5 230 44.8
TPR.G4830 Trifolium pratense HOM05D006456 ORTHO05D007588 1.0e-35 154.5 233 41.6
Psat6g223800 Pisum sativum HOM05D006456 ORTHO05D007588 2.9e-35 152.9 228 42.5
Eucgr.G02230 Eucalyptus grandis HOM05D006456 ORTHO05D007588 3.2e-34 149.4 222 48.2
Atru.chr11.288 Acer truncatum HOM05D006456 ORTHO05D007588 1.2e-33 147.5 230 40.9
arahy.Tifrunner.gnm1.ann1.WCM1NC Arachis hypogaea HOM05D006456 ORTHO05D007588 1.6e-33 147.1 223 46.2
AUR62002792 Chenopodium quinoa HOM05D006456 ORTHO05D007588 6.1e-33 145.2 234 44.0
VMungo0720G1166 Vigna mungo HOM05D006456 ORTHO05D007588 8.8e-32 141.4 219 46.1
Cpa.g.sc65.75 Carica papaya HOM05D006456 ORTHO05D007588 1.1e-31 141.0 212 45.3
Potri.010G118900 Populus trichocarpa HOM05D006456 ORTHO05D007588 1.1e-31 141.0 232 43.1
HPP92_004876 Vanilla planifolia HOM05D006456 ORTHO05D007588 5.7e-31 138.7 239 40.6
Sed0026587 Sechium edule HOM05D006456 ORTHO05D007588 2.2e-30 136.7 150 52.7
HPP92_004850 Vanilla planifolia HOM05D006456 ORTHO05D007588 2.8e-30 136.3 236 41.1
EL10Ac6g14282 Beta vulgaris HOM05D006456 ORTHO05D007588 8.2e-30 134.8 226 40.7
CsaV3_5G006740 Cucumis sativus L. HOM05D006456 ORTHO05D007588 7.0e-29 131.7 233 39.1
HanXRQChr17g0556611 Helianthus annuus HOM05D006456 ORTHO05D007588 2.6e-28 129.8 134 54.5
Ah.02g128170 Amaranthus hybridus HOM05D006456 ORTHO05D007588 3.5e-28 129.4 232 37.1
Zm00001eb357890 Zea mays HOM05D006456 ORTHO05D007588 1.9e-26 123.6 223 39.0
BolC6t38884H Brassica oleracea HOM05D006456 ORTHO05D007588 2.3e-24 116.7 120 52.5
Os01g0607300 Oryza sativa ssp. japonica HOM05D006456 ORTHO05D007588 6.7e-24 115.2 226 33.2
BraA07t30839Z Brassica rapa HOM05D006456 ORTHO05D007588 3.3e-23 112.8 118 50.8
Sabra10G0089400 Salix brachista HOM05D006456 ORTHO05D007588 1.3e-22 110.9 127 53.5
Nitab4.5_0012897g0010 Nicotiana tabacum HOM05D006456 ORTHO05D007588 1.7e-22 110.5 183 44.3
Pp3c2_12120 Physcomitrium patens HOM05D006456 ORTHO05D007588 1.5e-15 87.4 237 30.0
Pp3c14_19600 Physcomitrium patens HOM05D006456 ORTHO05D007588 2.0e-15 87.0 243 31.7
COL.COLO4_36793 Corchorus olitorius HOM05D006456 ORTHO05D007588 3.1e-13 79.7 53 66.0
Mapoly0066s0083 Marchantia polymorpha HOM05D006456 ORTHO05D007588 1.0e-11 74.7 226 29.6
CDE06G0604 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 9.4e-10 68.2 120 38.3
SHI16259 Sapria himalayana HOM05D006456 ORTHO05D007588 2.7e-09 66.6 49 69.4
CBR_g17172 Chara braunii HOM05D006456 ORTHO05D007588 1.3e-06 57.8 76 38.2
DCAR_030021 Daucus carota HOM05D000984 ORTHO05D007588 2.2e-06 57.0 73 37.0
DCAR_030977 Daucus carota HOM05D000984 ORTHO05D007588 2.8e-06 56.6 68 38.2
SEGI_26799 Sequoiadendron giganteum HOM05D006456 ORTHO05D007588 3.7e-06 56.2 92 42.4
Rhsim09G0057700 Rhododendron simsii HOM05D000984 ORTHO05D001096 6.3e-06 55.5 57 42.1


User provided reference genes

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