Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_52.g16880 Utricularia gibba HOM05D005532 ORTHO05D006873 7.6e-250 866.7 434 100.0
Migut.D00633 Erythranthe guttata HOM05D005532 ORTHO05D006873 1.0e-198 696.8 435 78.6
Oeu043291.1 Olea europaea HOM05D005532 ORTHO05D006873 2.0e-189 666.0 408 78.4
SGA_v2.0_scaffold29G12299 Striga asiatica HOM05D005532 ORTHO05D006873 1.6e-186 656.4 433 73.9
Nitab4.5_0011829g0040 Nicotiana tabacum HOM05D005532 ORTHO05D006873 1.0e-185 653.7 432 73.8
Dinv36220 Davidia involucrata HOM05D005532 ORTHO05D006873 5.5e-184 647.9 434 73.5
PGSC0003DMG400038188 Solanum tuberosum HOM05D005532 ORTHO05D006873 6.1e-183 644.4 404 77.0
CAN.G870.1 Capsicum annuum HOM05D005532 ORTHO05D006873 3.0e-182 642.1 432 72.9
Sopen11g024960 Solanum pennellii HOM05D005532 ORTHO05D006873 1.5e-181 639.8 404 76.2
GSVIVG01031546001 Vitis vinifera HOM05D005532 ORTHO05D006873 3.4e-181 638.6 425 72.5
Solyc11g065240.2 Solanum lycopersicum HOM05D005532 ORTHO05D006873 2.2e-180 636.0 404 76.0
CSS0007885 Camellia sinensis var. sinensis HOM05D005532 ORTHO05D006873 1.4e-179 633.3 406 75.1
Cpa.g.sc892.3 Carica papaya HOM05D005532 ORTHO05D006873 3.1e-179 632.1 401 76.3
TAR636G1137 Trochodendron aralioides HOM05D005532 ORTHO05D006873 4.1e-179 631.7 406 74.9
Nn7g36397 Nelumbo nucifera HOM05D005532 ORTHO05D006873 7.0e-179 630.9 407 74.4
TWI60G0905 Tripterygium wilfordii HOM05D005532 ORTHO05D006873 7.0e-179 630.9 418 73.2
Actinidia23981 Actinidia chinensis HOM05D005532 ORTHO05D006873 1.0e-177 627.1 434 71.0
Thecc.09G240600 Theobroma cacao HOM05D005532 ORTHO05D006873 1.0e-177 627.1 401 76.3
Duzib168G1386 Durio zibethinus HOM05D005532 ORTHO05D006873 2.9e-177 625.5 401 75.8
Potri.009G050100 Populus trichocarpa HOM05D005532 ORTHO05D006873 3.9e-177 625.2 400 75.2
Actinidia11667 Actinidia chinensis HOM05D005532 ORTHO05D006873 2.5e-176 622.5 406 73.9
PGR119G0320 Punica granatum HOM05D005532 ORTHO05D006873 1.6e-175 619.8 414 72.0
Atru.chr3.2637 Acer truncatum HOM05D005532 ORTHO05D006873 2.1e-175 619.4 399 76.2
Manes.14G005300 Manihot esculenta HOM05D005532 ORTHO05D006873 2.8e-175 619.0 408 72.1
TPR.G22568 Trifolium pratense HOM05D005532 ORTHO05D006873 8.0e-175 617.5 399 74.4
CiPaw.13G154000 Carya illinoinensis HOM05D005532 ORTHO05D006873 1.4e-174 616.7 395 75.7
Cc01_g02130 Coffea canephora HOM05D005532 ORTHO05D006873 2.3e-174 615.9 442 69.0
Gorai.001G136900 Gossypium raimondii HOM05D005532 ORTHO05D006873 3.1e-174 615.5 401 74.8
CANSAT54G2729 Cannabis sativa HOM05D005532 ORTHO05D006873 4.0e-174 615.1 403 73.4
Glyma.12G021500 Glycine max HOM05D005532 ORTHO05D006873 5.2e-174 614.8 400 73.5
Medtr4g076230 Medicago truncatula HOM05D005532 ORTHO05D006873 6.8e-174 614.4 401 74.1
arahy.Tifrunner.gnm1.ann1.3FY9NR Arachis hypogaea HOM05D005532 ORTHO05D006873 8.9e-174 614.0 403 73.9
arahy.Tifrunner.gnm1.ann1.7Y4SN4 Arachis hypogaea HOM05D005532 ORTHO05D006873 1.2e-173 613.6 403 74.4
Gohir.D07G126700 Gossypium hirsutum HOM05D005532 ORTHO05D006873 1.2e-173 613.6 401 74.6
Lalb_Chr19g0139721 Lupinus albus HOM05D005532 ORTHO05D006873 1.2e-173 613.6 400 74.2
Lj3g0021729 Lotus japonicus HOM05D005532 ORTHO05D006873 4.4e-173 611.7 399 73.4
HanXRQChr13g0401441 Helianthus annuus HOM05D005532 ORTHO05D006873 7.5e-173 610.9 409 73.6
RhsimUnG0131400 Rhododendron simsii HOM05D005532 ORTHO05D006873 7.5e-173 610.9 412 73.3
Phvul.011G078100 Phaseolus vulgaris HOM05D005532 ORTHO05D006873 1.7e-172 609.8 400 73.5
Aqoxy2G00249 Aquilegia oxysepala HOM05D005532 ORTHO05D006873 2.2e-172 609.4 396 74.0
Sed0019503 Sechium edule HOM05D005532 ORTHO05D006873 2.2e-172 609.4 418 71.3
MELO3C014575.2 Cucumis melo HOM05D005532 ORTHO05D006873 3.7e-172 608.6 400 73.2
MD11G1188300 Malus domestica HOM05D005532 ORTHO05D006873 1.4e-171 606.7 401 73.3
Rhsim01G0193400 Rhododendron simsii HOM05D005532 ORTHO05D006873 1.9e-171 606.3 423 70.9
HanXRQChr02g0051521 Helianthus annuus HOM05D005532 ORTHO05D006873 3.2e-171 605.5 398 74.6
Lj1A319T38 Lonicera japonica HOM05D005532 ORTHO05D006873 3.2e-171 605.5 429 70.9
Eucgr.J00735 Eucalyptus grandis HOM05D005532 ORTHO05D006873 5.4e-171 604.7 407 71.5
FvH4_3g28350 Fragaria vesca HOM05D005532 ORTHO05D006873 7.0e-171 604.4 405 70.9
Ciclev10015321m.g Citrus clementina HOM05D005532 ORTHO05D006873 9.2e-171 604.0 393 74.3
FAN25G0557 Fragaria x ananassa HOM05D005532 ORTHO05D006873 1.2e-170 603.6 405 70.9
Lsat_1_v5_gn_6_26061 Lactuca sativa HOM05D005532 ORTHO05D006873 1.6e-170 603.2 397 73.6
FAN16G3415 Fragaria x ananassa HOM05D005532 ORTHO05D006873 4.6e-170 601.7 405 70.6
THA.LOC104821584 Tarenaya hassleriana HOM05D005532 ORTHO05D006873 4.6e-170 601.7 392 74.2
RcHm_v2.0_Chr5g0053381 Rosa chinensis HOM05D005532 ORTHO05D006873 1.3e-169 600.1 404 71.0
Prupe.4G256000 Prunus persica HOM05D005532 ORTHO05D006873 3.9e-169 598.6 401 72.3
COL.COLO4_36473 Corchorus olitorius HOM05D005532 ORTHO05D006873 6.6e-169 597.8 382 75.9
PSO339G2797 Papaver somniferum HOM05D005532 ORTHO05D006873 1.5e-168 596.7 425 68.5
ECA233G0258 Erigeron canadensis HOM05D005532 ORTHO05D006873 1.9e-168 596.3 392 74.0
Nitab4.5_0005230g0080 Nicotiana tabacum HOM05D005532 ORTHO05D006873 7.3e-168 594.3 432 69.0
Psat7g179480 Pisum sativum HOM05D005532 ORTHO05D006873 2.1e-167 592.8 433 67.9
FAN21G2390 Fragaria x ananassa HOM05D005532 ORTHO05D006873 2.8e-167 592.4 405 69.1
Thhalv10011503m.g Eutrema salsugineum HOM05D005532 ORTHO05D006873 4.7e-167 591.7 412 70.4
PSO384G4693 Papaver somniferum HOM05D005532 ORTHO05D006873 6.2e-167 591.3 425 68.2
AT1G50450 Arabidopsis thaliana HOM05D005532 ORTHO05D006873 3.1e-166 589.0 412 69.9
AL1G58090 Arabidopsis lyrata HOM05D005532 ORTHO05D006873 8.9e-166 587.4 412 69.9
Haze_23183 Corylus avellana HOM05D005532 ORTHO05D006873 7.5e-165 584.3 445 66.5
Carub.0001s3953 Capsella rubella HOM05D005532 ORTHO05D006873 9.8e-165 583.9 412 69.4
Sp1g37280 Schrenkiella parvula HOM05D005532 ORTHO05D006873 1.3e-164 583.6 412 69.2
Hund07456 Selenicereus undatus HOM05D005532 ORTHO05D006873 4.9e-164 581.6 409 69.4
VMungo1127G1594 Vigna mungo HOM05D005532 ORTHO05D006873 1.1e-163 580.5 381 73.5
BcaC08g43214 Brassica carinata HOM05D005532 ORTHO05D006873 1.9e-163 579.7 400 69.8
EL10Ac4g10189 Beta vulgaris HOM05D005532 ORTHO05D006873 1.6e-162 576.6 452 65.9
BcaB07g33482 Brassica carinata HOM05D005532 ORTHO05D006873 1.6e-162 576.6 400 69.2
Os12g0137200 Oryza sativa ssp. japonica HOM05D005532 ORTHO05D006873 1.3e-161 573.5 404 68.6
Cfa009820 Carpinus fangiana HOM05D005532 ORTHO05D006873 3.9e-161 572.0 374 74.1
Zm00001eb093270 Zea mays HOM05D005532 ORTHO05D006873 6.6e-161 571.2 402 70.4
BraA06t23525Z Brassica rapa HOM05D005532 ORTHO05D006873 1.6e-159 566.6 400 69.2
A06p03120 Brassica napus HOM05D005532 ORTHO05D006873 2.1e-159 566.2 400 69.2
C06p05640 Brassica napus HOM05D005532 ORTHO05D006873 1.5e-157 560.1 400 68.5
BolC6t35671H Brassica oleracea HOM05D005532 ORTHO05D006873 1.5e-157 560.1 400 68.5
HPP92_011271 Vanilla planifolia HOM05D005532 ORTHO05D006873 1.5e-157 560.1 402 67.9
ClCG02G023050 Citrullus lanatus HOM05D005532 ORTHO05D006873 1.3e-156 557.0 433 65.4
CDE04G2597 Ceratophyllum demersum HOM05D005532 ORTHO05D006873 2.9e-156 555.8 392 68.9
arahy.Tifrunner.gnm1.ann1.PT8LN6 Arachis hypogaea HOM05D005532 ORTHO05D006873 1.1e-155 553.9 401 66.1
Aa31LG10G3830 Aethionema arabicum HOM05D005532 ORTHO05D006873 1.4e-155 553.5 414 67.1
vmacro14267 Vaccinium macrocarpon HOM05D005532 ORTHO05D006873 2.1e-154 549.7 549 55.2
Sabra09G0036700 Salix brachista HOM05D005532 ORTHO05D006873 3.5e-154 548.9 374 71.7
Glyma.11G095400 Glycine max HOM05D005532 ORTHO05D006873 6.6e-153 544.7 389 69.4
unitig_62.g23891 Utricularia gibba HOM05D005532 ORTHO05D006873 2.8e-151 539.3 334 81.1
AUR62000162 Chenopodium quinoa HOM05D005532 ORTHO05D006873 1.4e-150 537.0 371 70.6
AUR62039849 Chenopodium quinoa HOM05D005532 ORTHO05D006873 1.8e-150 536.6 348 74.7
Peaxi162Scf00004g00378 Petunia axillaris HOM05D005532 ORTHO05D006873 6.8e-150 534.6 404 66.8
Hma1.2p1_2169F.1_g315920 Hydrangea macrophylla HOM05D005532 ORTHO05D006873 1.2e-146 523.9 331 75.8
DCAR_023774 Daucus carota HOM05D005532 ORTHO05D006873 3.5e-146 522.3 434 62.4
Aa31LG10G3840 Aethionema arabicum HOM05D005532 ORTHO05D006873 2.6e-141 506.1 387 62.8
Mapoly0066s0102 Marchantia polymorpha HOM05D005532 ORTHO05D006873 2.6e-141 506.1 393 60.3
Hund07457 Selenicereus undatus HOM05D005532 ORTHO05D006873 3.8e-140 502.3 364 67.3
HPP92_011292 Vanilla planifolia HOM05D005532 ORTHO05D006873 6.4e-140 501.5 344 69.8
AagrBONN_evm.TU.Sc2ySwM_117.1967 Anthoceros agrestis HOM05D005532 ORTHO05D006873 3.5e-138 495.7 381 62.7
Haze_23184 Corylus avellana HOM05D005532 ORTHO05D006873 6.0e-138 495.0 373 67.3
AUR62039851 Chenopodium quinoa HOM05D005532 ORTHO05D006873 6.2e-135 485.0 338 68.9
Lsat_1_v5_gn_6_26080 Lactuca sativa HOM05D005532 ORTHO05D006873 1.4e-134 483.8 378 61.9
Gohir.A07G122800 Gossypium hirsutum HOM05D005532 ORTHO05D006873 5.8e-133 478.4 339 69.9
Ah.04g162030 Amaranthus hybridus HOM05D005532 ORTHO05D006873 9.3e-123 444.5 375 62.1
Sc09g0000860 Simmondsia chinensis HOM05D005532 ORTHO05D006873 4.6e-122 442.2 345 64.6
QL01p018283 Quercus lobata HOM05D005532 ORTHO05D006873 4.6e-114 415.6 324 64.8
SMO367G1041 Selaginella moellendorffii HOM05D005532 ORTHO05D006873 1.9e-112 410.2 373 53.4
CsaV3_6G039150 Cucumis sativus L. HOM05D005532 ORTHO05D006873 4.1e-110 402.5 265 73.6
Sc09g0000870 Simmondsia chinensis HOM05D005532 ORTHO05D006873 1.3e-108 397.5 304 66.1
CARHR040460 Cardamine hirsuta HOM05D005532 ORTHO05D006873 1.3e-100 370.9 277 67.1
Pp3c19_6050 Physcomitrium patens HOM05D005532 ORTHO05D006873 6.5e-100 368.6 319 58.6
Cre16.g666050 Chlamydomonas reinhardtii HOM05D005532 ORTHO05D006873 4.7e-98 362.5 410 47.3
MBI05_g22559_MAGBIO Magnolia biondii HOM05D005532 ORTHO05D006873 1.0e-97 361.3 324 59.0
ATR0721G047 Amborella trichopoda HOM05D005532 ORTHO05D006873 1.2e-93 347.8 233 70.4
SGA_v2.0_scaffold29G12269 Striga asiatica HOM05D005532 ORTHO05D006873 7.2e-91 338.6 384 45.6
MCO10G311 Micromonas commoda HOM05D005532 ORTHO05D006873 8.0e-90 335.1 399 44.9
Migut.D00646 Erythranthe guttata HOM05D005532 ORTHO05D006873 1.6e-66 257.7 291 48.1
SalBow6G6953 Salvia bowleyana HOM05D005532 ORTHO05D006873 1.5e-64 251.1 188 69.1
arahy.Tifrunner.gnm1.ann1.E0YEAW Arachis hypogaea HOM05D005532 ORTHO05D006873 8.3e-63 245.4 229 57.2
arahy.Tifrunner.gnm1.ann1.MM015B Arachis hypogaea HOM05D005532 ORTHO05D006873 8.3e-63 245.4 170 67.1
arahy.Tifrunner.gnm1.ann1.C2XCQ2 Arachis hypogaea HOM05D005532 ORTHO05D006873 1.1e-54 218.4 149 70.5
PRCOL_00003498 Prasinoderma coloniale HOM05D005532 ORTHO05D006873 3.2e-54 216.9 344 36.3
CsaV3_6G039160 Cucumis sativus L. HOM05D005532 ORTHO05D006873 6.6e-52 209.1 130 75.4
CBR_g3868 Chara braunii HOM05D000019 ORTHO05D000048 7.1e-46 189.1 174 56.9
CSS0040461 Camellia sinensis var. sinensis HOM05D005532 ORTHO05D006873 1.6e-45 188.0 122 74.6
Ciclev10017011m.g Citrus clementina HOM05D005532 ORTHO05D006873 5.2e-33 146.4 140 56.4
PRCOL_00002357 Prasinoderma coloniale HOM05D005532 ORTHO05D006873 1.2e-29 135.2 419 31.7
TPR.G22569 Trifolium pratense HOM05D005532 ORTHO05D006873 1.6e-29 134.8 108 62.0
SEGI_01123 Sequoiadendron giganteum HOM05D005532 ORTHO05D006873 2.8e-26 124.0 102 61.8
HanXRQChr09g0270661 Helianthus annuus HOM05D000715 ORTHO05D000024 1.3e-23 115.2 85 64.7
Hma1.2p1_2169F.1_g315910 Hydrangea macrophylla HOM05D005532 ORTHO05D006873 6.6e-20 102.8 78 66.7
SEGI_35247 Sequoiadendron giganteum HOM05D005532 ORTHO05D006873 1.9e-19 101.3 64 68.8
unitig_62.g23890 Utricularia gibba HOM05D005532 ORTHO05D006873 2.2e-15 87.8 67 68.7
Os11g0140700 Oryza sativa ssp. japonica HOM05D005532 ORTHO05D006873 3.5e-13 80.5 62 62.9
Zm00001eb093260 Zea mays HOM05D005990 ORTHO05D007908 4.6e-13 80.1 69 56.5
SEGI_01014 Sequoiadendron giganteum HOM05D005532 ORTHO05D006873 6.0e-13 79.7 76 52.6
HanXRQChr13g0403791 Helianthus annuus HOM05D005532 ORTHO05D006873 2.1e-10 71.2 49 69.4
GSVIVG01003967001 Vitis vinifera HOM05D003363 ORTHO05D003952 4.0e-09 67.0 67 46.3
RhsimUnG0131100 Rhododendron simsii HOM05D005532 ORTHO05D000282 2.2e-07 61.2 45 60.0
ATR0721G059 Amborella trichopoda HOM05D005532 ORTHO05D006873 1.1e-06 58.9 39 71.8
AUR62039850 Chenopodium quinoa HOM05D005532 ORTHO05D006873 5.5e-06 56.6 40 67.5
CBR_g38900 Chara braunii HOM05D021006 ORTHO05D024937 9.3e-06 55.8 144 27.8


User provided reference genes

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