Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_52.g16781 Utricularia gibba HOM05D007902 ORTHO05D009839 1.1e-101 373.2 185 100.0
Migut.F00588 Erythranthe guttata HOM05D007902 ORTHO05D009839 3.0e-30 136.0 130 53.8
Cc02_g05590 Coffea canephora HOM05D007902 ORTHO05D009839 6.7e-30 134.8 144 53.5
Peaxi162Scf00464g00015 Petunia axillaris HOM05D007902 ORTHO05D009839 1.7e-25 120.2 140 47.1
CAN.G591.5 Capsicum annuum HOM05D007902 ORTHO05D009839 6.5e-25 118.2 162 42.6
SalBow5G2004 Salvia bowleyana HOM05D007902 ORTHO05D009839 8.5e-25 117.9 125 50.4
Dinv21823 Davidia involucrata HOM05D007902 ORTHO05D009839 2.1e-23 113.2 124 50.0
Nitab4.5_0002713g0030 Nicotiana tabacum HOM05D007902 ORTHO05D009839 3.6e-23 112.5 118 52.5
Hma1.2p1_0292F.1_g115760 Hydrangea macrophylla HOM05D007902 ORTHO05D009839 4.7e-23 112.1 124 46.8
Sopen06g015820 Solanum pennellii HOM05D007902 ORTHO05D009839 1.4e-22 110.5 134 46.3
Nitab4.5_0000263g0270 Nicotiana tabacum HOM05D007902 ORTHO05D009839 1.8e-22 110.2 118 50.8
Actinidia07804 Actinidia chinensis HOM05D007902 ORTHO05D009839 3.0e-22 109.4 140 48.6
HanXRQChr09g0251491 Helianthus annuus HOM05D007902 ORTHO05D009839 1.2e-21 107.5 127 44.9
Oeu054429.1 Olea europaea HOM05D007902 ORTHO05D009839 1.5e-21 107.1 135 44.4
QL08p064506 Quercus lobata HOM05D007902 ORTHO05D009839 3.3e-21 105.9 134 44.8
Manes.07G138200 Manihot esculenta HOM05D007902 ORTHO05D009839 9.7e-21 104.4 158 43.0
Potri.019G049100 Populus trichocarpa HOM05D007902 ORTHO05D009839 1.7e-20 103.6 159 40.3
vmacro09979 Vaccinium macrocarpon HOM05D007902 ORTHO05D009839 3.7e-20 102.4 125 41.6
MD07G1231300 Malus domestica HOM05D007902 ORTHO05D009839 6.3e-20 101.7 160 38.8
MD01G1163300 Malus domestica HOM05D007902 ORTHO05D009839 1.1e-19 100.9 160 40.0
Rhsim09G0183800 Rhododendron simsii HOM05D007902 ORTHO05D009839 4.1e-19 99.0 148 41.9
Lsat_1_v5_gn_9_59200 Lactuca sativa HOM05D007902 ORTHO05D009839 7.0e-19 98.2 134 42.5
TAR623G0347 Trochodendron aralioides HOM05D007902 ORTHO05D009839 1.6e-18 97.1 127 44.9
Prupe.2G261300 Prunus persica HOM05D007902 ORTHO05D009839 2.0e-18 96.7 149 40.3
Eucgr.G03123 Eucalyptus grandis HOM05D007902 ORTHO05D009839 3.5e-18 95.9 130 43.8
Gohir.A13G005700 Gossypium hirsutum HOM05D007902 ORTHO05D009839 5.9e-18 95.1 121 44.6
EL10Ac2g04265 Beta vulgaris HOM05D007902 ORTHO05D009839 1.0e-17 94.4 128 41.4
Gohir.D13G005400 Gossypium hirsutum HOM05D007902 ORTHO05D009839 1.3e-17 94.0 121 43.0
Gorai.013G006100 Gossypium raimondii HOM05D007902 ORTHO05D009839 1.3e-17 94.0 121 43.0
Sabra19G0058600 Salix brachista HOM05D007902 ORTHO05D009839 1.7e-17 93.6 128 40.6
TWI53G0910 Tripterygium wilfordii HOM05D007902 ORTHO05D009839 2.2e-17 93.2 150 38.7
Haze_17334 Corylus avellana HOM05D007902 ORTHO05D009839 8.5e-17 91.3 132 37.9
FAN01G1070 Fragaria x ananassa HOM05D001122 ORTHO05D001877 1.9e-16 90.1 128 38.3
arahy.Tifrunner.gnm1.ann1.0H4UJT Arachis hypogaea HOM05D007902 ORTHO05D009839 2.5e-16 89.7 125 40.8
arahy.Tifrunner.gnm1.ann1.C7E7HV Arachis hypogaea HOM05D007902 ORTHO05D009839 3.2e-16 89.4 125 40.8
FAN06G1561 Fragaria x ananassa HOM05D007902 ORTHO05D009839 9.4e-16 87.8 119 39.5
FvH4_7g25601 Fragaria vesca HOM05D007902 ORTHO05D009839 1.2e-15 87.4 125 38.4
FAN03G2841 Fragaria x ananassa HOM05D001122 ORTHO05D001877 1.2e-15 87.4 125 38.4
CiPaw.01G304600 Carya illinoinensis HOM05D007902 ORTHO05D009839 1.6e-15 87.0 137 37.2
Cpa.g.sc19.89 Carica papaya HOM05D007902 ORTHO05D009839 4.7e-15 85.5 129 41.9
Ciclev10032767m.g Citrus clementina HOM05D007902 ORTHO05D009839 4.7e-15 85.5 141 40.4
RcHm_v2.0_Chr1g0371741 Rosa chinensis HOM05D007902 ORTHO05D009839 3.0e-14 82.8 148 35.8
SGA_v2.0_scaffold60G20910 Striga asiatica HOM05D005928 ORTHO05D007500 6.8e-14 81.6 180 33.9
COL.COLO4_26867 Corchorus olitorius HOM05D005928 ORTHO05D007500 1.2e-13 80.9 133 39.1
BcaC03g13156 Brassica carinata HOM05D007902 ORTHO05D009839 2.6e-13 79.7 141 34.0
BcaB05g21722 Brassica carinata HOM05D007902 ORTHO05D009839 4.4e-13 79.0 146 37.0
Ca_06023_v3 Cicer arietinum L. HOM05D007902 ORTHO05D009839 4.4e-13 79.0 131 39.7
CANSAT56G3130 Cannabis sativa HOM05D007902 ORTHO05D009839 5.7e-13 78.6 123 41.5
CDE07G0481 Ceratophyllum demersum HOM05D007902 ORTHO05D009839 5.7e-13 78.6 142 38.0
BraA02t04842Z Brassica rapa HOM05D007902 ORTHO05D009839 2.2e-12 76.6 143 33.6
Nn2g10362 Nelumbo nucifera HOM05D007902 ORTHO05D009839 3.7e-12 75.9 121 37.2
C09p71380 Brassica napus HOM05D007902 ORTHO05D009839 4.8e-12 75.5 153 33.3
Hund13474 Selenicereus undatus HOM05D007902 ORTHO05D009839 4.8e-12 75.5 159 32.1
BraA10t45132Z Brassica rapa HOM05D007902 ORTHO05D009839 6.3e-12 75.1 152 34.9
PGSC0003DMG400029078 Solanum tuberosum HOM05D007902 ORTHO05D009839 6.3e-12 75.1 102 40.2
C02p02280 Brassica napus HOM05D007902 ORTHO05D009839 8.3e-12 74.7 141 33.3
PGR142G4074 Punica granatum HOM05D007902 ORTHO05D009839 1.1e-11 74.3 143 34.3
AT5G05330 Arabidopsis thaliana HOM05D007902 ORTHO05D009839 1.4e-11 73.9 151 33.1
BcaC06g32241 Brassica carinata HOM05D007902 ORTHO05D009839 1.4e-11 73.9 153 34.0
BolC9t59901H Brassica oleracea HOM05D007902 ORTHO05D009839 1.8e-11 73.6 152 31.6
PSO017G6410 Papaver somniferum HOM05D007902 ORTHO05D009839 1.8e-11 73.6 140 39.3
Medtr0191s0020 Medicago truncatula HOM05D007902 ORTHO05D009839 5.4e-11 72.0 107 40.2
Sp6g37500 Schrenkiella parvula HOM05D007902 ORTHO05D009839 5.4e-11 72.0 148 33.1
Carub.0006s0425 Capsella rubella HOM05D007902 ORTHO05D009839 9.1e-11 71.2 151 32.5
CARHR207920 Cardamine hirsuta HOM05D007902 ORTHO05D009839 1.2e-10 70.9 132 35.6
AL6G15200 Arabidopsis lyrata HOM05D007902 ORTHO05D009839 1.3e-09 67.4 151 30.5
Lalb_Chr17g0347071 Lupinus albus HOM05D007902 ORTHO05D009839 1.3e-09 67.4 90 40.0
Lj1C1068T20 Lonicera japonica HOM05D007902 ORTHO05D009839 2.9e-09 66.2 71 45.1
Aqoxy4G02352 Aquilegia oxysepala HOM05D007902 ORTHO05D009839 5.0e-09 65.5 165 29.7
Atru.chr12.150 Acer truncatum HOM05D005928 ORTHO05D007500 8.6e-09 64.7 145 33.1
Thhalv10014946m.g Eutrema salsugineum HOM05D007902 ORTHO05D009839 1.9e-08 63.5 113 33.6
Psat1g014880 Pisum sativum HOM05D007902 ORTHO05D009839 1.9e-08 63.5 102 34.3
Lj1C1068G17 Lonicera japonica HOM05D004500 ORTHO05D009839 3.2e-08 62.8 122 35.2
Thecc.10G175100 Theobroma cacao HOM05D007902 ORTHO05D009839 3.2e-08 62.8 157 35.0
Lj1A965T42 Lonicera japonica HOM05D007902 ORTHO05D009839 5.5e-08 62.0 70 41.4
LjContig00357g0001230 Lotus japonicus HOM05D007902 ORTHO05D009839 9.5e-08 61.2 125 33.6
BolC2t06195H Brassica oleracea HOM05D007902 ORTHO05D009839 1.2e-07 60.8 141 30.5
PSO407G0011 Papaver somniferum HOM05D007902 ORTHO05D009839 1.2e-07 60.8 126 34.9
MBI03_g40382_MAGBIO Magnolia biondii HOM05D034203 ORTHO05D009839 3.0e-06 56.2 70 37.1
ECA232G2170 Erigeron canadensis HOM05D001122 ORTHO05D001877 5.2e-06 55.5 71 38.0


User provided reference genes

Program Settings