Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_51.g30981 Utricularia gibba HOM05D000484 ORTHO05D000346 9.6e-49 196.4 94 100.0
unitig_46.g18828 Utricularia gibba HOM05D000484 ORTHO05D000346 4.4e-46 187.6 94 95.7
unitig_37.g12788 Utricularia gibba HOM05D000484 ORTHO05D000346 6.9e-31 137.1 90 75.6
Lj1A1093T68 Lonicera japonica HOM05D000484 ORTHO05D000346 2.5e-20 102.1 78 70.5
Oeu021496.1 Olea europaea HOM05D000484 ORTHO05D000346 5.5e-20 100.9 77 68.8
SalBow6G3143 Salvia bowleyana HOM05D000484 ORTHO05D000346 9.3e-20 100.1 87 64.4
SGA_v2.0_scaffold69G23148 Striga asiatica HOM05D000484 ORTHO05D000346 1.1e-17 93.2 91 57.1
Cc06_g19170 Coffea canephora HOM05D000484 ORTHO05D000346 4.3e-17 91.3 77 68.8
Migut.J01660 Erythranthe guttata HOM05D000484 ORTHO05D000346 4.3e-17 91.3 102 54.9
PGSC0003DMG400012941 Solanum tuberosum HOM05D000484 ORTHO05D000346 1.3e-16 89.7 77 61.0
Solyc12g019880.1 Solanum lycopersicum HOM05D000484 ORTHO05D000346 3.7e-16 88.2 77 59.7
Sopen12g010280 Solanum pennellii HOM05D000484 ORTHO05D000346 3.7e-16 88.2 77 59.7
DCAR_013640 Daucus carota HOM05D000484 ORTHO05D000346 8.2e-16 87.0 74 58.1
CAN.G960.56 Capsicum annuum HOM05D000484 ORTHO05D000346 1.4e-15 86.3 92 57.6
Nitab4.5_0001408g0020 Nicotiana tabacum HOM05D000484 ORTHO05D000346 1.8e-15 85.9 77 58.4
Nitab4.5_0000810g0040 Nicotiana tabacum HOM05D000484 ORTHO05D000346 4.1e-15 84.7 77 57.1
Glyma.02G163800 Glycine max HOM05D000484 ORTHO05D000346 5.3e-15 84.3 75 58.7
Oeu029505.1 Olea europaea HOM05D000484 ORTHO05D000346 6.9e-15 84.0 77 61.0
Peaxi162Scf00003g04836 Petunia axillaris HOM05D000484 ORTHO05D000346 1.2e-14 83.2 92 51.1
Peaxi162Scf00076g00527 Petunia axillaris HOM05D000484 ORTHO05D000346 1.5e-14 82.8 79 62.0
Phvul.007G233500 Phaseolus vulgaris HOM05D000484 ORTHO05D000346 2.0e-14 82.4 74 60.8
vmacro07797 Vaccinium macrocarpon HOM05D000484 ORTHO05D000346 2.6e-14 82.0 76 52.6
CSS0005511 Camellia sinensis var. sinensis HOM05D000484 ORTHO05D000346 3.4e-14 81.6 81 51.9
DCAR_016879 Daucus carota HOM05D000484 ORTHO05D000346 3.4e-14 81.6 87 50.6
VMungo0720G1282 Vigna mungo HOM05D000484 ORTHO05D000346 3.4e-14 81.6 74 56.8
PGSC0003DMG400008369 Solanum tuberosum HOM05D000484 ORTHO05D000346 4.5e-14 81.3 90 52.2
Ca_26011_v3 Cicer arietinum L. HOM05D000484 ORTHO05D000346 7.7e-14 80.5 74 56.8
DCAR_020566 Daucus carota HOM05D000484 ORTHO05D000346 1.0e-13 80.1 77 61.0
Lj5g0002928 Lotus japonicus HOM05D000484 ORTHO05D000346 1.0e-13 80.1 77 59.7
Nitab4.5_0006279g0020 Nicotiana tabacum HOM05D000484 ORTHO05D000346 1.0e-13 80.1 87 48.3
Psat6g130400 Pisum sativum HOM05D000484 ORTHO05D000346 1.0e-13 80.1 74 56.8
Actinidia01822 Actinidia chinensis HOM05D000484 ORTHO05D000346 1.7e-13 79.3 77 51.9
Glyma.19G130700 Glycine max HOM05D000484 ORTHO05D000346 2.2e-13 79.0 79 57.0
Ca_08394_v3 Cicer arietinum L. HOM05D000484 ORTHO05D000346 2.9e-13 78.6 78 53.8
Psat3g078640 Pisum sativum HOM05D000484 ORTHO05D000346 3.8e-13 78.2 76 55.3
Medtr1g050740 Medicago truncatula HOM05D000484 ORTHO05D000346 5.0e-13 77.8 74 56.8
Lalb_Chr02g0156581 Lupinus albus HOM05D000484 ORTHO05D000346 1.1e-12 76.6 74 56.8
VMungo1383G2202 Vigna mungo HOM05D000484 ORTHO05D000346 1.1e-12 76.6 79 54.4
Lsat_1_v5_gn_5_157960 Lactuca sativa HOM05D000484 ORTHO05D000346 1.4e-12 76.3 74 54.1
PGR031G2563 Punica granatum HOM05D000484 ORTHO05D000346 1.4e-12 76.3 75 60.0
Lalb_Chr21g0316701 Lupinus albus HOM05D000484 ORTHO05D000346 1.9e-12 75.9 77 55.8
Manes.08G059600 Manihot esculenta HOM05D000484 ORTHO05D000346 1.9e-12 75.9 73 60.3
TPR.G30623 Trifolium pratense HOM05D000484 ORTHO05D000346 2.5e-12 75.5 78 55.1
Cpa.g.sc5.172 Carica papaya HOM05D000484 ORTHO05D000346 3.2e-12 75.1 74 54.1
HanXRQChr13g0387981 Helianthus annuus HOM05D000484 ORTHO05D000346 3.2e-12 75.1 74 52.7
Prupe.7G038800 Prunus persica HOM05D000484 ORTHO05D000346 3.2e-12 75.1 76 56.6
CANSAT64G2799 Cannabis sativa HOM05D000484 ORTHO05D000346 7.2e-12 73.9 76 56.6
MD14G1087700 Malus domestica HOM05D000484 ORTHO05D000346 9.4e-12 73.6 74 54.1
Manes.09G005500 Manihot esculenta HOM05D000484 ORTHO05D000346 9.4e-12 73.6 77 54.5
Aa31LG10G11860 Aethionema arabicum HOM05D000484 ORTHO05D000346 1.2e-11 73.2 77 53.2
CsaV3_4G029670 Cucumis sativus L. HOM05D000484 ORTHO05D000346 1.2e-11 73.2 74 54.1
Nitab4.5_0001052g0180 Nicotiana tabacum HOM05D000484 ORTHO05D000346 1.2e-11 73.2 90 50.0
Sabra16G0039000 Salix brachista HOM05D000484 ORTHO05D000346 1.6e-11 72.8 73 57.5
arahy.Tifrunner.gnm1.ann1.S1HWUN Arachis hypogaea HOM05D000484 ORTHO05D000346 2.7e-11 72.0 96 46.9
ECA248G2017 Erigeron canadensis HOM05D000484 ORTHO05D000346 2.7e-11 72.0 86 47.7
Ciclev10006414m.g Citrus clementina HOM05D000484 ORTHO05D000346 3.6e-11 71.6 77 51.9
Peaxi162Scf00696g00313 Petunia axillaris HOM05D000484 ORTHO05D000346 3.6e-11 71.6 92 47.8
Thecc.05G135100 Theobroma cacao HOM05D000484 ORTHO05D000346 3.6e-11 71.6 77 57.1
AUR62030322 Chenopodium quinoa HOM05D000484 ORTHO05D000346 4.6e-11 71.2 82 53.7
ECA247G3775 Erigeron canadensis HOM05D000484 ORTHO05D000346 4.6e-11 71.2 74 48.6
Gohir.D03G067500 Gossypium hirsutum HOM05D000484 ORTHO05D000346 4.6e-11 71.2 77 54.5
Gorai.003G089000 Gossypium raimondii HOM05D000484 ORTHO05D000346 4.6e-11 71.2 77 54.5
TPR.G7605 Trifolium pratense HOM05D000484 ORTHO05D000346 4.6e-11 71.2 74 50.0
arahy.Tifrunner.gnm1.ann1.SG2GGN Arachis hypogaea HOM05D000484 ORTHO05D000346 6.1e-11 70.9 97 46.4
Duzib128G0146 Durio zibethinus HOM05D000484 ORTHO05D000346 6.1e-11 70.9 74 52.7
Nitab4.5_0002036g0060 Nicotiana tabacum HOM05D000484 ORTHO05D000346 6.1e-11 70.9 91 46.2
Solyc10g078460.2 Solanum lycopersicum HOM05D000484 ORTHO05D000346 6.1e-11 70.9 87 48.3
Sopen10g029120 Solanum pennellii HOM05D000484 ORTHO05D000346 6.1e-11 70.9 87 48.3
TWI74G1628 Tripterygium wilfordii HOM05D000484 ORTHO05D000346 6.1e-11 70.9 78 57.7
Gohir.D01G183400 Gossypium hirsutum HOM05D000484 ORTHO05D000346 7.9e-11 70.5 74 52.7
Gorai.002G226500 Gossypium raimondii HOM05D000484 ORTHO05D000346 7.9e-11 70.5 74 52.7
BcaC02g09882 Brassica carinata HOM05D000484 ORTHO05D000346 1.4e-10 69.7 75 53.3
A04p03640 Brassica napus HOM05D000484 ORTHO05D000346 1.4e-10 69.7 75 53.3
C04p35590 Brassica napus HOM05D000484 ORTHO05D000346 1.4e-10 69.7 75 53.3
BolC4t25246H Brassica oleracea HOM05D000484 ORTHO05D000346 1.4e-10 69.7 75 53.3
BraA04t16071Z Brassica rapa HOM05D000484 ORTHO05D000346 1.4e-10 69.7 75 53.3
ClCG04G004490 Citrullus lanatus HOM05D000484 ORTHO05D000346 1.4e-10 69.7 77 51.9
PGR044G0543 Punica granatum HOM05D000484 ORTHO05D000346 1.4e-10 69.7 74 50.0
Cfa020006 Carpinus fangiana HOM05D000484 ORTHO05D000346 1.8e-10 69.3 74 50.0
HanXRQChr03g0061541 Helianthus annuus HOM05D000484 ORTHO05D000346 1.8e-10 69.3 74 48.6
Lj1g0005674 Lotus japonicus HOM05D000484 ORTHO05D000346 1.8e-10 69.3 80 51.2
MELO3C019075.2 Cucumis melo HOM05D000484 ORTHO05D000346 2.3e-10 68.9 76 50.0
Duzib093G0524 Durio zibethinus HOM05D000484 ORTHO05D000346 2.3e-10 68.9 74 52.7
Sed0009163 Sechium edule HOM05D000484 ORTHO05D000346 2.3e-10 68.9 74 48.6
TWI53G0613 Tripterygium wilfordii HOM05D000484 ORTHO05D000346 2.3e-10 68.9 74 52.7
EL10Ac3g07234 Beta vulgaris HOM05D000484 ORTHO05D000346 3.0e-10 68.6 80 50.0
Duzib106G0012 Durio zibethinus HOM05D000484 ORTHO05D000346 3.0e-10 68.6 74 52.7
Glyma.03G128100 Glycine max HOM05D000484 ORTHO05D000346 3.0e-10 68.6 83 49.4
Rhsim03G0039600 Rhododendron simsii HOM05D000484 ORTHO05D000346 3.0e-10 68.6 79 46.8
AUR62018345 Chenopodium quinoa HOM05D000484 ORTHO05D000346 3.9e-10 68.2 82 52.4
Phvul.001G123800 Phaseolus vulgaris HOM05D000484 ORTHO05D000346 3.9e-10 68.2 79 50.6
GSVIVG01013483001 Vitis vinifera HOM05D000484 ORTHO05D000346 3.9e-10 68.2 89 46.1
Lsat_1_v5_gn_9_29580 Lactuca sativa HOM05D000484 ORTHO05D000346 5.1e-10 67.8 86 46.5
C06p23940 Brassica napus HOM05D000484 ORTHO05D000346 6.7e-10 67.4 80 52.5
BraA07t29978Z Brassica rapa HOM05D000484 ORTHO05D000346 6.7e-10 67.4 80 51.2
FAN02G3886 Fragaria x ananassa HOM05D000484 ORTHO05D000346 6.7e-10 67.4 83 49.4
Sed0024144 Sechium edule HOM05D000484 ORTHO05D000346 8.8e-10 67.0 77 54.5
COL.COLO4_36665 Corchorus olitorius HOM05D000484 ORTHO05D000346 1.1e-09 66.6 74 50.0
BcaB02g08340 Brassica carinata HOM05D000484 ORTHO05D000346 1.5e-09 66.2 77 51.9
CiPaw.10G040000 Carya illinoinensis HOM05D000484 ORTHO05D000346 1.5e-09 66.2 77 50.6
A03p23130 Brassica napus HOM05D000484 ORTHO05D000346 2.0e-09 65.9 79 49.4
BraA03t11534Z Brassica rapa HOM05D000484 ORTHO05D000346 2.0e-09 65.9 79 49.4
Haze_20223 Corylus avellana HOM05D000484 ORTHO05D000346 2.0e-09 65.9 75 50.7
Thhalv10016282m.g Eutrema salsugineum HOM05D000484 ORTHO05D000346 2.0e-09 65.9 79 53.2
Nitab4.5_0000812g0130 Nicotiana tabacum HOM05D000484 ORTHO05D000346 2.0e-09 65.9 86 44.2
QL07p010337 Quercus lobata HOM05D000484 ORTHO05D000346 2.0e-09 65.9 74 54.1
Haze_20224 Corylus avellana HOM05D000484 ORTHO05D000346 2.5e-09 65.5 74 47.3
PSO339G4184 Papaver somniferum HOM05D000484 ORTHO05D000346 2.5e-09 65.5 89 42.7
Potri.016G036800 Populus trichocarpa HOM05D000484 ORTHO05D000346 2.5e-09 65.5 73 52.1
TAR633G0612 Trochodendron aralioides HOM05D000484 ORTHO05D000346 2.5e-09 65.5 74 47.3
A07p23170 Brassica napus HOM05D000484 ORTHO05D000346 3.3e-09 65.1 80 52.5
BraA07t29979Z Brassica rapa HOM05D000484 ORTHO05D000346 3.3e-09 65.1 80 52.5
Medtr7g089950 Medicago truncatula HOM05D000484 ORTHO05D000346 3.3e-09 65.1 78 48.7
Rhsim12G0009300 Rhododendron simsii HOM05D000484 ORTHO05D000346 3.3e-09 65.1 91 39.6
BcaB02g07632 Brassica carinata HOM05D000484 ORTHO05D000346 4.3e-09 64.7 80 51.2
Lalb_Chr24g0400341 Lupinus albus HOM05D000484 ORTHO05D000346 4.3e-09 64.7 82 48.8
RcHm_v2.0_Chr2g0125511 Rosa chinensis HOM05D000484 ORTHO05D000346 4.3e-09 64.7 75 52.0
BcaC01g05354 Brassica carinata HOM05D000484 ORTHO05D000346 5.7e-09 64.3 79 48.1
C03p27560 Brassica napus HOM05D000484 ORTHO05D000346 5.7e-09 64.3 79 48.1
BolC3t15129H Brassica oleracea HOM05D000484 ORTHO05D000346 5.7e-09 64.3 79 48.1
CiPaw.09G047500 Carya illinoinensis HOM05D000484 ORTHO05D000346 5.7e-09 64.3 77 49.4
Lalb_Chr22g0357411 Lupinus albus HOM05D000484 ORTHO05D000346 7.4e-09 63.9 83 51.8
Aa31LG3G790 Aethionema arabicum HOM05D000484 ORTHO05D000346 9.7e-09 63.5 83 48.2
PSO384G2751 Papaver somniferum HOM05D000484 ORTHO05D000346 9.7e-09 63.5 89 41.6
THA.LOC104824401 Tarenaya hassleriana HOM05D000484 ORTHO05D000346 9.7e-09 63.5 79 48.1
A05p02120 Brassica napus HOM05D000484 ORTHO05D000346 1.3e-08 63.2 79 48.1
BraA05t19208Z Brassica rapa HOM05D000484 ORTHO05D000346 1.3e-08 63.2 79 48.1
Manes.04G159100 Manihot esculenta HOM05D000484 ORTHO05D000346 1.3e-08 63.2 76 47.4
BcaB01g03484 Brassica carinata HOM05D000484 ORTHO05D000346 1.7e-08 62.8 79 50.6
Cfa020007 Carpinus fangiana HOM05D000484 ORTHO05D000346 1.7e-08 62.8 75 49.3
BcaC08g44813 Brassica carinata HOM05D000484 ORTHO05D000346 2.2e-08 62.4 80 47.5
C04p02530 Brassica napus HOM05D000484 ORTHO05D000346 2.2e-08 62.4 79 48.1
Sp4g23510 Schrenkiella parvula HOM05D000484 ORTHO05D000346 2.2e-08 62.4 79 50.6
AL5G38390 Arabidopsis lyrata HOM05D000484 ORTHO05D000346 2.8e-08 62.0 82 48.8
Eucgr.J01180 Eucalyptus grandis HOM05D000484 ORTHO05D000346 2.8e-08 62.0 74 47.3
FAN09G3240 Fragaria x ananassa HOM05D000484 ORTHO05D000346 2.8e-08 62.0 80 47.5
TWI63G0956 Tripterygium wilfordii HOM05D000484 ORTHO05D000346 2.8e-08 62.0 74 45.9
BcaC02g12761 Brassica carinata HOM05D000484 ORTHO05D000346 3.7e-08 61.6 79 48.1
BolC4t21896H Brassica oleracea HOM05D000484 ORTHO05D000346 3.7e-08 61.6 79 48.1
Sp5g05620 Schrenkiella parvula HOM05D000484 ORTHO05D000346 3.7e-08 61.6 80 50.0
ClCG05G026840 Citrullus lanatus HOM05D000484 ORTHO05D000346 4.8e-08 61.2 74 45.9
MELO3C012475.2 Cucumis melo HOM05D000484 ORTHO05D000346 4.8e-08 61.2 74 45.9
CsaV3_5G036790 Cucumis sativus L. HOM05D000484 ORTHO05D000346 4.8e-08 61.2 74 45.9
Sc19g0008210 Simmondsia chinensis HOM05D000484 ORTHO05D000346 4.8e-08 61.2 92 43.5
TAR623G0781 Trochodendron aralioides HOM05D000484 ORTHO05D000346 4.8e-08 61.2 75 48.0
Carub.0005s2370 Capsella rubella HOM05D000484 ORTHO05D000346 6.3e-08 60.8 80 50.0
Nn2g14831 Nelumbo nucifera HOM05D000484 ORTHO05D000346 8.2e-08 60.5 73 47.9
Nn7g36689 Nelumbo nucifera HOM05D000484 ORTHO05D000346 8.2e-08 60.5 73 46.6
PSO339G5362 Papaver somniferum HOM05D000484 ORTHO05D000346 1.1e-07 60.1 77 44.2
Atru.chr12.1329 Acer truncatum HOM05D000484 ORTHO05D000346 1.4e-07 59.7 76 44.7
AT3G56960 Arabidopsis thaliana HOM05D000484 ORTHO05D000346 1.4e-07 59.7 81 45.7
CAN.G128.69 Capsicum annuum HOM05D000484 ORTHO05D000346 1.4e-07 59.7 96 41.7
Nitab4.5_0004955g0060 Nicotiana tabacum HOM05D000484 ORTHO05D000346 1.4e-07 59.7 75 52.0
Sed0002189 Sechium edule HOM05D000484 ORTHO05D000346 1.4e-07 59.7 74 45.9
TAR369G0411 Trochodendron aralioides HOM05D000484 ORTHO05D000346 1.4e-07 59.7 74 47.3
Nitab4.5_0000307g0280 Nicotiana tabacum HOM05D000484 ORTHO05D000346 1.8e-07 59.3 75 50.7
CARHR167110 Cardamine hirsuta HOM05D000484 ORTHO05D000346 2.4e-07 58.9 80 46.2
Thhalv10005792m.g Eutrema salsugineum HOM05D000484 ORTHO05D000346 2.4e-07 58.9 82 45.1
Manes.11G005500 Manihot esculenta HOM05D000484 ORTHO05D000346 2.4e-07 58.9 79 46.8
Sopen10g031290 Solanum pennellii HOM05D000484 ORTHO05D000346 2.4e-07 58.9 98 38.8
C08p32240 Brassica napus HOM05D000484 ORTHO05D000346 3.1e-07 58.5 82 43.9
BolC8t50840H Brassica oleracea HOM05D000484 ORTHO05D000346 3.1e-07 58.5 82 43.9
Atru.chr1.1443 Acer truncatum HOM05D000484 ORTHO05D000346 4.1e-07 58.2 78 48.7
AT2G41210 Arabidopsis thaliana HOM05D000484 ORTHO05D000346 5.3e-07 57.8 79 48.1
BcaC07g40010 Brassica carinata HOM05D000484 ORTHO05D000346 6.9e-07 57.4 82 43.9
BcaC07g40011 Brassica carinata HOM05D000484 ORTHO05D000346 6.9e-07 57.4 82 43.9
A09p49880 Brassica napus HOM05D000484 ORTHO05D000346 6.9e-07 57.4 82 43.9
BraA09t40439Z Brassica rapa HOM05D000484 ORTHO05D000346 6.9e-07 57.4 82 43.9
Carub.0004s2352 Capsella rubella HOM05D000484 ORTHO05D000346 9.1e-07 57.0 79 48.1
Hund19097 Selenicereus undatus HOM05D000484 ORTHO05D000346 1.2e-06 56.6 82 45.1
BcaC07g40102 Brassica carinata HOM05D000484 ORTHO05D000346 1.5e-06 56.2 80 43.8
CARHR136290 Cardamine hirsuta HOM05D000484 ORTHO05D000346 2.6e-06 55.5 79 44.3
Eucgr.A02248 Eucalyptus grandis HOM05D000484 ORTHO05D000346 3.4e-06 55.1 87 46.0
RcHm_v2.0_Chr1g0325051 Rosa chinensis HOM05D000484 ORTHO05D000346 3.4e-06 55.1 74 41.9
TWI15G0732 Tripterygium wilfordii HOM05D000484 ORTHO05D000346 3.4e-06 55.1 74 44.6
VMungo1080G0572 Vigna mungo HOM05D000484 ORTHO05D000346 4.5e-06 54.7 73 46.6
Lj3g0019287 Lotus japonicus HOM05D000484 ORTHO05D000346 5.9e-06 54.3 75 53.3
MD02G1285400 Malus domestica HOM05D000484 ORTHO05D000346 5.9e-06 54.3 65 47.7
Ah.04g150950 Amaranthus hybridus HOM05D000484 ORTHO05D000346 7.7e-06 53.9 84 41.7
CiPaw.14G007800 Carya illinoinensis HOM05D000484 ORTHO05D000346 7.7e-06 53.9 73 45.2
FvH4_6g25450 Fragaria vesca HOM05D000484 ORTHO05D000346 7.7e-06 53.9 80 45.0
unitig_26.g9603 Utricularia gibba HOM05D000484 ORTHO05D000346 7.7e-06 53.9 75 46.7


User provided reference genes

Program Settings