Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_46.g18837 Utricularia gibba HOM05D002243 ORTHO05D001848 7.2e-254 880.2 473 100.0
MSTRG.20241 Avicennia marina HOM05D002243 ORTHO05D001848 8.3e-24 115.9 436 32.6
unitig_61.g26040 Utricularia gibba HOM05D002243 ORTHO05D001848 9.1e-23 112.5 238 40.8
SalBow6G4432 Salvia bowleyana HOM05D002243 ORTHO05D001848 2.6e-17 94.4 400 31.5
SalBow6G2660 Salvia bowleyana HOM05D002243 ORTHO05D001848 5.7e-17 93.2 406 31.5
MSTRG.16664 Avicennia marina HOM05D002243 ORTHO05D001848 2.8e-16 90.9 409 32.0
unitig_0.g886 Utricularia gibba HOM05D002243 ORTHO05D001848 3.7e-16 90.5 405 31.6
MSTRG.27769 Avicennia marina HOM05D002243 ORTHO05D001848 8.3e-16 89.4 418 29.2
DCAR_021931 Daucus carota HOM05D002243 ORTHO05D001848 1.8e-15 88.2 401 30.9
Oeu005723.1 Olea europaea HOM05D002243 ORTHO05D001848 5.4e-15 86.7 464 28.2
Migut.B00490 Erythranthe guttata HOM05D002243 ORTHO05D001848 2.0e-14 84.7 225 34.2
Dinv44914 Davidia involucrata HOM05D002243 ORTHO05D001848 3.5e-14 84.0 322 30.7
Dinv09523 Davidia involucrata HOM05D002243 ORTHO05D001848 4.5e-14 83.6 423 27.9
MD10G1112600 Malus domestica HOM05D002243 ORTHO05D001848 4.5e-14 83.6 104 51.9
MD05G1108600 Malus domestica HOM05D002243 ORTHO05D001848 1.7e-13 81.6 110 46.4
Lj5P222T65 Lonicera japonica HOM05D002243 ORTHO05D001848 2.9e-13 80.9 428 31.1
Lalb_Chr06g0164961 Lupinus albus HOM05D002243 ORTHO05D001848 3.9e-13 80.5 400 28.5
arahy.Tifrunner.gnm1.ann1.XGM7WG Arachis hypogaea HOM05D002243 ORTHO05D001848 1.1e-12 79.0 331 32.0
CSS0029796 Camellia sinensis var. sinensis HOM05D002243 ORTHO05D001848 3.3e-12 77.4 392 29.8
QL11p028600 Quercus lobata HOM05D002243 ORTHO05D001848 3.3e-12 77.4 78 51.3
QL11p028729 Quercus lobata HOM05D002243 ORTHO05D001848 3.3e-12 77.4 78 51.3
Ah.01g024500 Amaranthus hybridus HOM05D002243 ORTHO05D001848 9.5e-12 75.9 78 51.3
CSS0016364 Camellia sinensis var. sinensis HOM05D002243 ORTHO05D001848 1.6e-11 75.1 427 27.6
Manes.07G051400 Manihot esculenta HOM05D002243 ORTHO05D001848 2.8e-11 74.3 110 41.8
AUR62027035 Chenopodium quinoa HOM05D002243 ORTHO05D001848 3.6e-11 73.9 78 48.7
Rhsim11G0148900 Rhododendron simsii HOM05D002243 ORTHO05D001848 3.6e-11 73.9 372 30.9
CARHR246210 Cardamine hirsuta HOM05D002243 ORTHO05D001848 4.7e-11 73.6 331 28.7
GSVIVG01037020001 Vitis vinifera HOM05D002243 ORTHO05D001848 4.7e-11 73.6 70 55.7
PGSC0003DMG400005118 Solanum tuberosum HOM05D002243 ORTHO05D001848 6.1e-11 73.2 105 44.8
TAR381G0567 Trochodendron aralioides HOM05D002243 ORTHO05D001848 6.1e-11 73.2 416 28.1
AUR62030879 Chenopodium quinoa HOM05D002243 ORTHO05D001848 8.0e-11 72.8 78 47.4
Psat6g212880 Pisum sativum HOM05D002243 ORTHO05D001848 1.0e-10 72.4 78 44.9
Carub.0004s0193 Capsella rubella HOM05D002243 ORTHO05D001848 1.4e-10 72.0 123 43.1
Actinidia02430 Actinidia chinensis HOM05D002243 ORTHO05D001848 1.8e-10 71.6 89 46.1
Migut.H00311 Erythranthe guttata HOM05D002243 ORTHO05D001848 1.8e-10 71.6 79 54.4
Lj2A425T27 Lonicera japonica HOM05D002243 ORTHO05D001848 6.8e-10 69.7 111 44.1
AL4G12330 Arabidopsis lyrata HOM05D002243 ORTHO05D001848 8.9e-10 69.3 135 39.3
C08p40260 Brassica napus HOM05D002243 ORTHO05D001848 8.9e-10 69.3 140 40.0
BolC8t51594H Brassica oleracea HOM05D002243 ORTHO05D001848 8.9e-10 69.3 140 40.0
CiPaw.06G162700 Carya illinoinensis HOM05D002243 ORTHO05D001848 8.9e-10 69.3 236 33.1
Glyma.11G002700 Glycine max HOM05D002243 ORTHO05D001848 8.9e-10 69.3 428 28.0
Thecc.01G079600 Theobroma cacao HOM05D002243 ORTHO05D001848 8.9e-10 69.3 147 40.8
BcaC07g41022 Brassica carinata HOM05D002243 ORTHO05D001848 1.2e-09 68.9 128 41.4
Oeu061818.1 Olea europaea HOM05D002243 ORTHO05D001848 1.2e-09 68.9 81 50.6
SEGI_35164 Sequoiadendron giganteum HOM05D002243 ORTHO05D001848 1.2e-09 68.9 141 39.0
Atru.chr5.2225 Acer truncatum HOM05D002243 ORTHO05D001848 1.5e-09 68.6 112 40.2
C03p79030 Brassica napus HOM05D002243 ORTHO05D001848 1.5e-09 68.6 149 39.6
Glyma.01G241100 Glycine max HOM05D002243 ORTHO05D001848 1.5e-09 68.6 54 64.8
FAN15G2335 Fragaria x ananassa HOM05D002243 ORTHO05D001848 2.0e-09 68.2 419 28.4
Lj5g0020290 Lotus japonicus HOM05D002243 ORTHO05D001848 2.0e-09 68.2 106 39.6
BcaC01g00374 Brassica carinata HOM05D002243 ORTHO05D001848 3.4e-09 67.4 102 47.1
BolC3t20144H Brassica oleracea HOM05D002243 ORTHO05D001848 3.4e-09 67.4 102 47.1
CSS0022177 Camellia sinensis var. sinensis HOM05D002243 ORTHO05D001848 3.4e-09 67.4 395 28.9
CARHR114080 Cardamine hirsuta HOM05D002243 ORTHO05D001848 3.4e-09 67.4 104 42.3
Oeu010475.1 Olea europaea HOM05D002243 ORTHO05D001848 3.4e-09 67.4 251 31.9
BcaB06g27840 Brassica carinata HOM05D002243 ORTHO05D001848 4.4e-09 67.0 161 37.9
CDE04G0825 Ceratophyllum demersum HOM05D002243 ORTHO05D001848 4.4e-09 67.0 108 39.8
Ca_11007_v3 Cicer arietinum L. HOM05D002243 ORTHO05D001848 4.4e-09 67.0 110 40.9
Eucgr.G01184 Eucalyptus grandis HOM05D002243 ORTHO05D001848 4.4e-09 67.0 199 32.2
Lalb_Chr09g0329371 Lupinus albus HOM05D002243 ORTHO05D001848 4.4e-09 67.0 158 36.7
GSVIVG01006594001 Vitis vinifera HOM05D002243 ORTHO05D001848 5.8e-09 66.6 79 46.8
MD02G1193800 Malus domestica HOM05D002243 ORTHO05D001848 7.5e-09 66.2 127 39.4
Psat4g088240 Pisum sativum HOM05D002243 ORTHO05D001848 7.5e-09 66.2 104 41.3
Sp4g01810 Schrenkiella parvula HOM05D002243 ORTHO05D001848 7.5e-09 66.2 136 37.5
Sed0013875 Sechium edule HOM05D002243 ORTHO05D001848 7.5e-09 66.2 406 27.6
Haze_21939 Corylus avellana HOM05D002243 ORTHO05D001848 9.8e-09 65.9 333 29.1
Gohir.D02G234800 Gossypium hirsutum HOM05D002243 ORTHO05D001848 9.8e-09 65.9 104 43.3
Solyc01g106680.4 Solanum lycopersicum HOM05D002243 ORTHO05D001848 9.8e-09 65.9 463 26.1
BcaC02g08599 Brassica carinata HOM05D002243 ORTHO05D001848 1.3e-08 65.5 110 41.8
C04p52120 Brassica napus HOM05D002243 ORTHO05D001848 1.3e-08 65.5 110 41.8
BolC4t26786H Brassica oleracea HOM05D002243 ORTHO05D001848 1.3e-08 65.5 110 41.8
CDE07G0845 Ceratophyllum demersum HOM05D001149 ORTHO05D001848 1.7e-08 65.1 105 39.0
Ca_28397_v3 Cicer arietinum L. HOM05D002243 ORTHO05D001848 1.7e-08 65.1 104 43.3
Gohir.A03G213300 Gossypium hirsutum HOM05D002243 ORTHO05D001848 1.7e-08 65.1 105 43.8
Nitab4.5_0000396g0020 Nicotiana tabacum HOM05D002243 ORTHO05D001848 1.7e-08 65.1 167 32.9
PSO782G0611 Papaver somniferum HOM05D002243 ORTHO05D001848 1.7e-08 65.1 141 37.6
PSO832G2889 Papaver somniferum HOM05D002243 ORTHO05D001848 1.7e-08 65.1 141 37.6
Aqoxy5G01944 Aquilegia oxysepala HOM05D002243 ORTHO05D001848 2.2e-08 64.7 117 41.0
Cfa006795 Carpinus fangiana HOM05D002243 ORTHO05D001848 2.2e-08 64.7 115 40.0
Gorai.005G262800 Gossypium raimondii HOM05D002243 ORTHO05D001848 2.2e-08 64.7 89 43.8
Manes.12G119100 Manihot esculenta HOM05D002243 ORTHO05D001848 2.2e-08 64.7 165 39.4
FAN08G2076 Fragaria x ananassa HOM05D002243 ORTHO05D001848 2.9e-08 64.3 127 40.2
Gohir.D03G032300 Gossypium hirsutum HOM05D002243 ORTHO05D001848 2.9e-08 64.3 136 39.7
Medtr5g005430 Medicago truncatula HOM05D002243 ORTHO05D001848 2.9e-08 64.3 73 43.8
Prupe.6G213200 Prunus persica HOM05D002243 ORTHO05D001848 2.9e-08 64.3 161 36.0
Ca_22085_v3 Cicer arietinum L. HOM05D002243 ORTHO05D001848 3.7e-08 63.9 129 39.5
ECA238G4103 Erigeron canadensis HOM05D002243 ORTHO05D001848 3.7e-08 63.9 104 40.4
ATR0767G056 Amborella trichopoda HOM05D002243 ORTHO05D001848 4.9e-08 63.5 73 47.9
AT2G22795 Arabidopsis thaliana HOM05D002243 ORTHO05D001848 4.9e-08 63.5 117 41.0
Hma1.2p1_1953F.1_g308845 Hydrangea macrophylla HOM05D002243 ORTHO05D001848 4.9e-08 63.5 96 44.8
Hma1.2p1_1953F.1_g308850 Hydrangea macrophylla HOM05D002243 ORTHO05D001848 4.9e-08 63.5 96 44.8
Peaxi162Scf00016g03211 Petunia axillaris HOM05D002243 ORTHO05D001848 4.9e-08 63.5 418 27.5
Glyma.05G110000 Glycine max HOM05D002243 ORTHO05D001848 6.4e-08 63.2 88 43.2
Nitab4.5_0001477g0030 Nicotiana tabacum HOM05D002243 ORTHO05D001848 6.4e-08 63.2 449 26.5
Phvul.003G231700 Phaseolus vulgaris HOM05D002243 ORTHO05D001848 6.4e-08 63.2 107 39.3
RcHm_v2.0_Chr7g0232141 Rosa chinensis HOM05D002243 ORTHO05D001848 6.4e-08 63.2 122 38.5
Duzib264G1092 Durio zibethinus HOM05D002243 ORTHO05D001848 8.3e-08 62.8 81 46.9
Thhalv10024837m.g Eutrema salsugineum HOM05D002243 ORTHO05D001848 8.3e-08 62.8 96 35.4
Gorai.003G033900 Gossypium raimondii HOM05D002243 ORTHO05D001848 8.3e-08 62.8 137 39.4
Atru.chr3.1086 Acer truncatum HOM05D002243 ORTHO05D001848 1.1e-07 62.4 103 43.7
C07p59860 Brassica napus HOM05D010391 ORTHO05D001848 1.1e-07 62.4 71 47.9
CAN.G1061.5 Capsicum annuum HOM05D002243 ORTHO05D001848 1.1e-07 62.4 143 32.2
Duzib147G0075 Durio zibethinus HOM05D002243 ORTHO05D001848 1.1e-07 62.4 144 37.5
Manes.13G106800 Manihot esculenta HOM05D002243 ORTHO05D001848 1.1e-07 62.4 167 35.9
BcaNung04324 Brassica carinata HOM05D010391 ORTHO05D001848 1.4e-07 62.0 71 45.1
Lj1g0019537 Lotus japonicus HOM05D002243 ORTHO05D001848 1.9e-07 61.6 447 26.8
Oeu059798.2 Olea europaea HOM05D002243 ORTHO05D001848 1.9e-07 61.6 111 39.6
vmacro22263 Vaccinium macrocarpon HOM05D002243 ORTHO05D001848 1.9e-07 61.6 426 27.2
Haze_03961 Corylus avellana HOM05D002243 ORTHO05D001848 2.4e-07 61.2 157 36.3
Sabra02G0089100 Salix brachista HOM05D002243 ORTHO05D001848 2.4e-07 61.2 234 32.1
SGA_v2.0_scaffold269G46251 Striga asiatica HOM05D002243 ORTHO05D001848 2.4e-07 61.2 114 38.6
Aqoxy6G01532 Aquilegia oxysepala HOM05D002243 ORTHO05D001848 3.2e-07 60.8 260 31.5
FAN26G0529 Fragaria x ananassa HOM05D002243 ORTHO05D001848 3.2e-07 60.8 195 34.9
Dinv01223 Davidia involucrata HOM05D002243 ORTHO05D001848 4.1e-07 60.5 366 28.4
Manes.18G052200 Manihot esculenta HOM05D002243 ORTHO05D001848 4.1e-07 60.5 344 29.1
A09p57220 Brassica napus HOM05D002243 ORTHO05D001848 5.4e-07 60.1 145 37.2
Thhalv10025138m.g Eutrema salsugineum HOM05D010391 ORTHO05D001848 5.4e-07 60.1 75 46.7
Sed0027893 Sechium edule HOM05D002243 ORTHO05D001848 5.4e-07 60.1 219 31.5
TPR.G22426 Trifolium pratense HOM05D002243 ORTHO05D001848 5.4e-07 60.1 159 35.2
Actinidia36403 Actinidia chinensis HOM05D002243 ORTHO05D001848 7.0e-07 59.7 136 38.2
CsaV3_6G044480 Cucumis sativus L. HOM05D002243 ORTHO05D001848 7.0e-07 59.7 155 34.8
CiPaw.05G022100 Carya illinoinensis HOM05D002243 ORTHO05D001848 9.2e-07 59.3 445 26.3
Nitab4.5_0006325g0010 Nicotiana tabacum HOM05D002243 ORTHO05D001848 9.2e-07 59.3 147 32.7
Peaxi162Scf00096g00157 Petunia axillaris HOM05D002243 ORTHO05D001848 9.2e-07 59.3 101 37.6
BraA09t41115Z Brassica rapa HOM05D002243 ORTHO05D001848 1.2e-06 58.9 145 37.9
CiPaw.07G039400 Carya illinoinensis HOM05D002243 ORTHO05D001848 1.2e-06 58.9 162 37.7
FvH4_1g18591 Fragaria vesca HOM05D002243 ORTHO05D001848 1.2e-06 58.9 141 36.9
FAN19G3209 Fragaria x ananassa HOM05D002243 ORTHO05D001848 1.2e-06 58.9 141 36.9
Migut.I00452 Erythranthe guttata HOM05D002243 ORTHO05D001848 1.6e-06 58.5 103 41.7
VMungo0720G2670 Vigna mungo HOM05D002243 ORTHO05D001848 1.6e-06 58.5 351 29.3
Nitab4.5_0007488g0020 Nicotiana tabacum HOM05D002243 ORTHO05D001848 2.0e-06 58.2 431 26.5
Thecc.02G032300 Theobroma cacao HOM05D002243 ORTHO05D001848 2.0e-06 58.2 345 27.0
ClCG01G017950 Citrullus lanatus HOM05D002243 ORTHO05D001848 2.7e-06 57.8 110 37.3
Cfa004723 Carpinus fangiana HOM05D002243 ORTHO05D001848 3.5e-06 57.4 437 26.3
AUR62036624 Chenopodium quinoa HOM05D068200 ORTHO05D001848 3.5e-06 57.4 155 38.1
Atru.chr13.906 Acer truncatum HOM05D002243 ORTHO05D001848 6.0e-06 56.6 136 36.8
AL7G12850 Arabidopsis lyrata HOM05D002243 ORTHO05D001848 6.0e-06 56.6 325 26.2
Sopen02g036460 Solanum pennellii HOM05D002243 ORTHO05D001848 6.0e-06 56.6 154 29.2
Aa31LG7G14010 Aethionema arabicum HOM05D002243 ORTHO05D001848 7.8e-06 56.2 270 28.9
MSTRG.2796 Avicennia marina HOM05D002243 ORTHO05D001848 7.8e-06 56.2 106 40.6
ECA236G0236 Erigeron canadensis HOM05D002243 ORTHO05D001848 7.8e-06 56.2 432 27.1
Medtr4g097790 Medicago truncatula HOM05D002243 ORTHO05D001848 7.8e-06 56.2 120 35.8
SalBow6G5711 Salvia bowleyana HOM05D002243 ORTHO05D001848 7.8e-06 56.2 458 25.8
SGA_v2.0_scaffold121G33087 Striga asiatica HOM05D002243 ORTHO05D001848 7.8e-06 56.2 114 37.7


User provided reference genes

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