Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_46.g18801 Utricularia gibba HOM05D004420 ORTHO05D005048 5.8e-195 684.1 358 100.0
Oeu043391.2 Olea europaea HOM05D004420 ORTHO05D005048 1.0e-58 231.5 381 41.2
Oeu045734.2 Olea europaea HOM05D004420 ORTHO05D005048 3.0e-58 229.9 380 41.1
Migut.F01091 Erythranthe guttata HOM05D004420 ORTHO05D005048 2.2e-53 213.8 358 42.7
CSS0016949 Camellia sinensis var. sinensis HOM05D004420 ORTHO05D005048 4.2e-52 209.5 367 40.9
CSS0044881 Camellia sinensis var. sinensis HOM05D004420 ORTHO05D005048 4.2e-52 209.5 367 40.9
Dinv40192 Davidia involucrata HOM05D004420 ORTHO05D005048 4.3e-49 199.5 365 39.2
SalBow2G0301 Salvia bowleyana HOM05D004420 ORTHO05D005048 5.6e-49 199.1 365 39.7
SalBow2G0742 Salvia bowleyana HOM05D004420 ORTHO05D005048 5.6e-49 199.1 365 39.7
Dinv40193 Davidia involucrata HOM05D004420 ORTHO05D005048 1.3e-48 198.0 360 38.3
Actinidia17355 Actinidia chinensis HOM05D004420 ORTHO05D005048 1.8e-47 194.1 372 39.0
Hma1.2p1_0300F.1_g117950 Hydrangea macrophylla HOM05D004420 ORTHO05D005048 1.2e-46 191.4 374 38.0
CSS0013805 Camellia sinensis var. sinensis HOM05D004420 ORTHO05D005048 3.4e-46 189.9 367 38.7
Nitab4.5_0004608g0040 Nicotiana tabacum HOM05D004420 ORTHO05D005048 4.5e-46 189.5 381 38.8
Ciclev10025852m.g Citrus clementina HOM05D004420 ORTHO05D005048 1.1e-44 184.9 387 36.2
Cc07_g11920 Coffea canephora HOM05D004420 ORTHO05D005048 1.9e-44 184.1 382 35.9
Actinidia22893 Actinidia chinensis HOM05D004420 ORTHO05D005048 2.4e-44 183.7 372 38.2
Hma1.2p1_0085F.1_g044630 Hydrangea macrophylla HOM05D004420 ORTHO05D005048 3.2e-44 183.3 359 38.7
CAN.G1238.15 Capsicum annuum HOM05D004420 ORTHO05D005048 2.1e-43 180.6 377 40.1
Rhsim10G0195100 Rhododendron simsii HOM05D004420 ORTHO05D005048 2.7e-43 180.3 360 37.2
Peaxi162Scf00121g00249 Petunia axillaris HOM05D004420 ORTHO05D005048 7.9e-43 178.7 382 37.4
MELO3C013712.2 Cucumis melo HOM05D004420 ORTHO05D005048 1.3e-42 177.9 385 37.1
Nitab4.5_0001467g0050 Nicotiana tabacum HOM05D004420 ORTHO05D005048 1.3e-42 177.9 383 37.1
CsaV3_3G000180 Cucumis sativus L. HOM05D004420 ORTHO05D005048 3.0e-42 176.8 385 36.4
vmacro20627 Vaccinium macrocarpon HOM05D004420 ORTHO05D005048 3.0e-42 176.8 351 36.5
Lj2P500T27 Lonicera japonica HOM05D004420 ORTHO05D005048 1.1e-41 174.9 362 37.8
Sed0027819 Sechium edule HOM05D004420 ORTHO05D005048 1.9e-41 174.1 380 36.1
Actinidia35683 Actinidia chinensis HOM05D004420 ORTHO05D005048 2.5e-41 173.7 372 37.9
Cfa007085 Carpinus fangiana HOM05D004420 ORTHO05D005048 3.3e-41 173.3 394 32.7
Prupe.7G183600 Prunus persica HOM05D004420 ORTHO05D005048 3.3e-41 173.3 381 35.7
PGR119G1834 Punica granatum HOM05D004420 ORTHO05D005048 4.3e-41 172.9 361 36.3
Sopen02g027250 Solanum pennellii HOM05D004420 ORTHO05D005048 7.4e-41 172.2 384 37.8
CiPaw.08G182000 Carya illinoinensis HOM05D004420 ORTHO05D005048 9.6e-41 171.8 375 35.5
TWI09G0210 Tripterygium wilfordii HOM05D004420 ORTHO05D005048 9.6e-41 171.8 390 35.1
Eucgr.I02220 Eucalyptus grandis HOM05D004420 ORTHO05D005048 2.1e-40 170.6 369 36.0
SGA_v2.0_scaffold60G21098 Striga asiatica HOM05D004420 ORTHO05D005048 6.2e-40 169.1 304 40.8
Actinidia28747 Actinidia chinensis HOM05D004420 ORTHO05D005048 1.1e-39 168.3 366 36.3
PGSC0003DMG400001515 Solanum tuberosum HOM05D004420 ORTHO05D005048 1.1e-39 168.3 384 35.9
unitig_52.g17736 Utricularia gibba HOM05D004420 ORTHO05D005048 1.1e-39 168.3 275 42.9
Cpa.g.sc6.366 Carica papaya HOM05D004420 ORTHO05D005048 9.0e-39 165.2 370 34.9
Potri.005G102000 Populus trichocarpa HOM05D004420 ORTHO05D005048 9.0e-39 165.2 400 36.2
ClCG10G000160 Citrullus lanatus HOM05D004420 ORTHO05D005048 2.6e-38 163.7 397 35.3
TWI53G1718 Tripterygium wilfordii HOM05D004420 ORTHO05D005048 3.4e-38 163.3 350 35.7
Phvul.003G270300 Phaseolus vulgaris HOM05D004420 ORTHO05D005048 5.8e-38 162.5 386 35.0
Sabra05G0084400 Salix brachista HOM05D004420 ORTHO05D005048 9.9e-38 161.8 401 35.2
Duzib147G0341 Durio zibethinus HOM05D004420 ORTHO05D005048 1.3e-37 161.4 388 33.5
Potri.007G063000 Populus trichocarpa HOM05D004420 ORTHO05D005048 1.3e-37 161.4 399 33.8
RcHm_v2.0_Chr2g0097081 Rosa chinensis HOM05D004420 ORTHO05D005048 1.7e-37 161.0 383 34.7
Migut.F00308 Erythranthe guttata HOM05D004420 ORTHO05D005048 2.2e-37 160.6 362 36.2
SGA_v2.0_scaffold10G05298 Striga asiatica HOM05D004420 ORTHO05D005048 2.2e-37 160.6 356 37.4
FAN19G0089 Fragaria x ananassa HOM05D004420 ORTHO05D005048 2.9e-37 160.2 383 34.7
FvH4_1g10260 Fragaria vesca HOM05D004420 ORTHO05D005048 3.8e-37 159.8 383 34.7
FAN26G2737 Fragaria x ananassa HOM05D004420 ORTHO05D005048 4.9e-37 159.5 383 34.7
MD15G1230400 Malus domestica HOM05D004420 ORTHO05D005048 4.9e-37 159.5 383 35.0
FAN23G0043 Fragaria x ananassa HOM05D004420 ORTHO05D005048 1.1e-36 158.3 383 35.0
Ah.03g142860 Amaranthus hybridus HOM05D004420 ORTHO05D005048 3.2e-36 156.8 388 35.3
DCAR_014284 Daucus carota HOM05D004420 ORTHO05D005048 4.2e-36 156.4 366 36.6
DCAR_014308 Daucus carota HOM05D004420 ORTHO05D005048 4.2e-36 156.4 366 36.6
Manes.01G155700 Manihot esculenta HOM05D004420 ORTHO05D005048 5.5e-36 156.0 408 34.1
VMungo0251G1478 Vigna mungo HOM05D004420 ORTHO05D005048 7.1e-36 155.6 386 33.7
Ca_02853_v3 Cicer arietinum L. HOM05D004420 ORTHO05D005048 1.6e-35 154.5 380 32.9
Thecc.01G004900 Theobroma cacao HOM05D004420 ORTHO05D005048 1.6e-35 154.5 390 32.6
QL06p053029 Quercus lobata HOM05D004420 ORTHO05D005048 4.6e-35 152.9 392 32.9
MD02G1114600 Malus domestica HOM05D004420 ORTHO05D005048 7.9e-35 152.1 388 33.2
Phvul.002G117000 Phaseolus vulgaris HOM05D004420 ORTHO05D005048 2.3e-34 150.6 389 31.6
arahy.Tifrunner.gnm1.ann1.7Y7MXI Arachis hypogaea HOM05D004420 ORTHO05D005048 5.1e-34 149.4 377 30.8
arahy.Tifrunner.gnm1.ann1.PTZ9GF Arachis hypogaea HOM05D004420 ORTHO05D005048 5.1e-34 149.4 377 30.8
Psat4g103680 Pisum sativum HOM05D004420 ORTHO05D005048 5.1e-34 149.4 387 32.3
THA.LOC104819714 Tarenaya hassleriana HOM05D004420 ORTHO05D005048 5.1e-34 149.4 397 33.8
EL10Ac6g15050 Beta vulgaris HOM05D004420 ORTHO05D005048 6.7e-34 149.1 383 32.6
CANSAT25G3726 Cannabis sativa HOM05D004420 ORTHO05D005048 5.6e-33 146.0 385 32.2
Glyma.01G158300 Glycine max HOM05D004420 ORTHO05D005048 6.2e-32 142.5 379 32.7
Ah.02g123000 Amaranthus hybridus HOM05D000464 ORTHO05D005048 1.1e-31 141.7 391 33.5
AUR62002052 Chenopodium quinoa HOM05D004420 ORTHO05D005048 1.8e-31 141.0 358 31.8
Lj2g0010108 Lotus japonicus HOM05D004420 ORTHO05D005048 1.8e-31 141.0 379 32.2
Sc07g0001390 Simmondsia chinensis HOM05D004420 ORTHO05D005048 4.0e-31 139.8 368 32.6
Solyc03g032100.2 Solanum lycopersicum HOM05D004420 ORTHO05D005048 4.0e-31 139.8 307 38.4
VMungo1215G0928 Vigna mungo HOM05D004420 ORTHO05D005048 4.0e-31 139.8 378 31.5
Aqoxy6G01610 Aquilegia oxysepala HOM05D004420 ORTHO05D005048 1.2e-30 138.3 344 33.4
HanXRQChr16g0531901 Helianthus annuus HOM05D004420 ORTHO05D005048 1.2e-30 138.3 372 33.6
Sopen03g005950 Solanum pennellii HOM05D004420 ORTHO05D005048 1.2e-30 138.3 307 38.1
Aa31LG8G14840 Aethionema arabicum HOM05D004420 ORTHO05D005048 2.0e-30 137.5 385 33.5
HanXRQChr16g0531911 Helianthus annuus HOM05D004420 ORTHO05D005048 2.0e-30 137.5 367 34.1
Lalb_Chr05g0214821 Lupinus albus HOM05D004420 ORTHO05D005048 2.0e-30 137.5 385 30.9
Lj4P237T30 Lonicera japonica HOM05D004420 ORTHO05D005048 3.4e-30 136.7 389 33.9
TPR.G13730 Trifolium pratense HOM05D004420 ORTHO05D005048 4.5e-30 136.3 385 30.9
AT4G35510 Arabidopsis thaliana HOM05D004420 ORTHO05D005048 1.7e-29 134.4 375 33.3
COL.COLO4_22555 Corchorus olitorius HOM05D004420 ORTHO05D005048 1.7e-29 134.4 367 31.9
Gorai.003G001900 Gossypium raimondii HOM05D004420 ORTHO05D005048 2.2e-29 134.0 397 30.7
THA.LOC104807425 Tarenaya hassleriana HOM05D004420 ORTHO05D005048 2.2e-29 134.0 375 31.7
Glyma.11G086400 Glycine max HOM05D004420 ORTHO05D005048 2.9e-29 133.7 376 30.9
Gohir.D03G001500 Gossypium hirsutum HOM05D004420 ORTHO05D005048 2.9e-29 133.7 395 31.6
Medtr8g073305 Medicago truncatula HOM05D004420 ORTHO05D005048 3.8e-29 133.3 384 31.0
CiPaw.07G002200 Carya illinoinensis HOM05D004420 ORTHO05D005048 6.5e-29 132.5 334 32.6
Gohir.A02G178300 Gossypium hirsutum HOM05D004420 ORTHO05D005048 6.5e-29 132.5 399 30.8
ECA246G3765 Erigeron canadensis HOM05D004420 ORTHO05D005048 1.1e-28 131.7 371 34.8
Atru.chr3.127 Acer truncatum HOM05D004420 ORTHO05D005048 1.4e-28 131.3 380 32.4
Glyma.16G111400 Glycine max HOM05D004420 ORTHO05D005048 1.4e-28 131.3 324 34.9
Manes.02G114400 Manihot esculenta HOM05D004420 ORTHO05D005048 1.4e-28 131.3 406 31.0
Gorai.001G199300 Gossypium raimondii HOM05D004420 ORTHO05D005048 2.5e-28 130.6 341 33.1
Carub.0007s0482 Capsella rubella HOM05D004420 ORTHO05D005048 3.2e-28 130.2 371 32.9
Duzib264G0151 Durio zibethinus HOM05D004420 ORTHO05D005048 7.1e-28 129.0 387 30.5
Gohir.D07G178200 Gossypium hirsutum HOM05D004420 ORTHO05D005048 9.3e-28 128.6 341 32.8
GSVIVG01022291001 Vitis vinifera HOM05D004420 ORTHO05D005048 9.3e-28 128.6 358 32.4
Carub.0003s3163 Capsella rubella HOM05D004420 ORTHO05D005048 1.0e-26 125.2 368 31.8
Gohir.A07G173800 Gossypium hirsutum HOM05D004420 ORTHO05D005048 1.3e-26 124.8 341 31.7
PSO210G4741 Papaver somniferum HOM05D004420 ORTHO05D005048 1.3e-26 124.8 335 32.8
Lalb_Chr09g0334351 Lupinus albus HOM05D004420 ORTHO05D005048 2.3e-26 124.0 378 31.0
Lalb_Chr09g0324761 Lupinus albus HOM05D004420 ORTHO05D005048 5.1e-26 122.9 377 30.8
Glyma.09G197900 Glycine max HOM05D004420 ORTHO05D005048 6.7e-26 122.5 342 31.9
CAN.G354.13 Capsicum annuum HOM05D004420 ORTHO05D005048 8.7e-26 122.1 296 36.1
PGSC0003DMG400018682 Solanum tuberosum HOM05D004420 ORTHO05D005048 1.5e-25 121.3 307 36.8
AL3G50510 Arabidopsis lyrata HOM05D004420 ORTHO05D005048 1.9e-25 120.9 367 31.3
AL7G15660 Arabidopsis lyrata HOM05D004420 ORTHO05D005048 2.5e-25 120.6 377 32.1
CARHR243840 Cardamine hirsuta HOM05D004420 ORTHO05D005048 7.4e-25 119.0 376 32.4
TAR381G0338 Trochodendron aralioides HOM05D004420 ORTHO05D005048 7.4e-25 119.0 310 31.9
AUR62003743 Chenopodium quinoa HOM05D004420 ORTHO05D005048 9.7e-25 118.6 284 34.5
TAR376G0940 Trochodendron aralioides HOM05D004420 ORTHO05D005048 9.7e-25 118.6 369 29.0
PSO761G0558 Papaver somniferum HOM05D004420 ORTHO05D005048 1.6e-24 117.9 335 31.9
CDE05G3647 Ceratophyllum demersum HOM05D004420 ORTHO05D005048 4.8e-24 116.3 303 30.7
Sp3g30900 Schrenkiella parvula HOM05D004420 ORTHO05D005048 8.2e-24 115.5 313 34.5
Thhalv10025668m.g Eutrema salsugineum HOM05D004420 ORTHO05D005048 1.4e-23 114.8 382 32.2
TAR625G1485 Trochodendron aralioides HOM05D004420 ORTHO05D005048 1.4e-23 114.8 350 28.0
Eucgr.J02539 Eucalyptus grandis HOM05D004420 ORTHO05D005048 2.4e-23 114.0 178 42.7
Lsat_1_v5_gn_8_112420 Lactuca sativa HOM05D004420 ORTHO05D005048 1.0e-21 108.6 349 33.5
Sabra07G0052400 Salix brachista HOM05D004420 ORTHO05D005048 1.3e-21 108.2 322 31.4
Peaxi162Scf00580g00013 Petunia axillaris HOM05D004420 ORTHO05D005048 2.2e-21 107.5 195 41.5
Nn6g31686 Nelumbo nucifera HOM05D004420 ORTHO05D005048 8.5e-21 105.5 298 30.5
BcaB08g34743 Brassica carinata HOM05D004420 ORTHO05D005048 2.1e-19 100.9 298 33.9
Lalb_Chr16g0380091 Lupinus albus HOM05D004420 ORTHO05D005048 4.6e-19 99.8 248 30.2
MBI08_g12255_MAGBIO Magnolia biondii HOM05D004420 ORTHO05D005048 1.0e-18 98.6 375 27.7
Thhalv10022789m.g Eutrema salsugineum HOM05D004420 ORTHO05D005048 1.4e-18 98.2 318 31.8
Lj4g0016332 Lotus japonicus HOM05D004420 ORTHO05D005048 1.4e-18 98.2 379 29.3
Sp7g33290 Schrenkiella parvula HOM05D004420 ORTHO05D005048 2.0e-17 94.4 336 30.4
BcaB03g16523 Brassica carinata HOM05D004420 ORTHO05D005048 3.3e-17 93.6 292 33.9
BolC3t18106H Brassica oleracea HOM05D004420 ORTHO05D005048 2.8e-16 90.5 299 32.4
A06p33900 Brassica napus HOM05D004420 ORTHO05D005048 3.7e-16 90.1 291 32.3
BraA06t26325Z Brassica rapa HOM05D004420 ORTHO05D005048 4.8e-16 89.7 291 34.0
BcaC01g02911 Brassica carinata HOM05D004420 ORTHO05D005048 1.1e-15 88.6 299 33.1
C03p58480 Brassica napus HOM05D004420 ORTHO05D005048 1.1e-15 88.6 299 33.1
C07p05740 Brassica napus HOM05D004420 ORTHO05D005048 1.4e-15 88.2 288 33.0
CDE05G1602 Ceratophyllum demersum HOM05D001617 ORTHO05D008611 1.8e-15 87.8 232 34.1
BcaC06g36286 Brassica carinata HOM05D004420 ORTHO05D005048 3.1e-15 87.0 288 33.3
CiPaw.13G121300 Carya illinoinensis HOM05D004420 ORTHO05D005048 9.1e-15 85.5 168 39.3
Solyc02g082570.3 Solanum lycopersicum HOM05D004420 ORTHO05D005048 1.5e-14 84.7 151 37.1
BcaNung03633 Brassica carinata HOM05D004420 ORTHO05D005048 3.4e-14 83.6 285 32.3
Lsat_1_v5_gn_3_67941 Lactuca sativa HOM05D004420 ORTHO05D005048 2.5e-12 77.4 231 34.2
A01p03090 Brassica napus HOM05D004420 ORTHO05D005048 8.8e-10 68.9 199 34.2
BraA01t00293Z Brassica rapa HOM05D004420 ORTHO05D005048 1.5e-09 68.2 201 33.8
BolC1t00331H Brassica oleracea HOM05D004420 ORTHO05D005048 5.7e-09 66.2 220 34.1
BcaNung00585 Brassica carinata HOM05D004420 ORTHO05D005048 2.2e-08 64.3 212 33.0
C01p03440 Brassica napus HOM05D004420 ORTHO05D005048 2.2e-08 64.3 212 33.0
AT2G17540 Arabidopsis thaliana HOM05D004420 ORTHO05D005048 4.5e-06 56.6 368 26.6


User provided reference genes

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