Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_46.g18743 Utricularia gibba HOM05D006817 ORTHO05D008603 7.7e-253 876.7 458 100.0
MSTRG.27274 Avicennia marina HOM05D006817 ORTHO05D008603 1.5e-110 404.1 386 59.3
Migut.F00593 Erythranthe guttata HOM05D006817 ORTHO05D008603 3.3e-110 402.9 382 59.4
SGA_v2.0_scaffold44G16643 Striga asiatica HOM05D006817 ORTHO05D008603 6.4e-106 388.7 480 50.4
Oeu036532.1 Olea europaea HOM05D006817 ORTHO05D008603 1.1e-105 387.9 380 56.8
TAR623G0065 Trochodendron aralioides HOM05D006817 ORTHO05D008603 1.4e-105 387.5 377 57.0
Actinidia00992 Actinidia chinensis HOM05D006817 ORTHO05D008603 2.5e-102 376.7 383 55.9
Sopen06g015650 Solanum pennellii HOM05D006817 ORTHO05D008603 5.6e-102 375.6 381 57.5
PGR044G0301 Punica granatum HOM05D006817 ORTHO05D008603 2.1e-101 373.6 377 56.2
Solyc06g050210.3 Solanum lycopersicum HOM05D006817 ORTHO05D008603 2.8e-101 373.2 381 57.2
CAN.G169.4 Capsicum annuum HOM05D006817 ORTHO05D008603 4.7e-101 372.5 489 48.7
Nitab4.5_0011715g0010 Nicotiana tabacum HOM05D006817 ORTHO05D008603 1.4e-100 370.9 386 54.9
Nn2g10348 Nelumbo nucifera HOM05D006817 ORTHO05D008603 5.8e-99 365.5 440 49.8
Peaxi162Scf00739g00017 Petunia axillaris HOM05D006817 ORTHO05D008603 9.9e-99 364.8 478 48.5
Potri.019G048700 Populus trichocarpa HOM05D006817 ORTHO05D008603 2.2e-98 363.6 497 46.1
DCAR_014588 Daucus carota HOM05D006817 ORTHO05D008603 3.8e-98 362.8 425 51.5
GSVIVG01032704001 Vitis vinifera HOM05D006817 ORTHO05D008603 4.9e-98 362.5 376 55.1
CSS0030257 Camellia sinensis var. sinensis HOM05D006817 ORTHO05D008603 8.4e-98 361.7 477 49.5
Thecc.10G176900 Theobroma cacao HOM05D006817 ORTHO05D008603 2.4e-97 360.1 472 47.7
Atru.chr12.157 Acer truncatum HOM05D006817 ORTHO05D008603 4.2e-97 359.4 373 54.7
Aqoxy4G02362 Aquilegia oxysepala HOM05D006817 ORTHO05D008603 7.1e-97 358.6 369 55.3
Ciclev10031264m.g Citrus clementina HOM05D006817 ORTHO05D008603 1.2e-96 357.8 444 49.8
Gorai.011G210100 Gossypium raimondii HOM05D006817 ORTHO05D008603 3.5e-96 356.3 416 50.0
Gohir.A10G180300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 4.6e-96 355.9 416 50.0
TWI09G1614 Tripterygium wilfordii HOM05D006817 ORTHO05D008603 1.0e-95 354.8 377 53.3
ECA232G4264 Erigeron canadensis HOM05D006817 ORTHO05D008603 2.3e-95 353.6 388 53.1
CANSAT56G1261 Cannabis sativa HOM05D006817 ORTHO05D008603 1.6e-93 347.4 433 48.0
Cc02_g05530 Coffea canephora HOM05D006817 ORTHO05D008603 4.8e-93 345.9 424 51.2
Eucgr.J00131 Eucalyptus grandis HOM05D006817 ORTHO05D008603 4.8e-93 345.9 386 51.6
Lsat_1_v5_gn_9_59361 Lactuca sativa HOM05D006817 ORTHO05D008603 1.8e-92 344.0 396 51.0
Rhsim09G0184300 Rhododendron simsii HOM05D006817 ORTHO05D008603 4.0e-92 342.8 399 51.4
Phvul.001G074700 Phaseolus vulgaris HOM05D006817 ORTHO05D008603 2.0e-91 340.5 385 51.9
PSO170G5674 Papaver somniferum HOM05D006817 ORTHO05D008603 3.4e-91 339.7 361 53.7
THA.LOC104816518 Tarenaya hassleriana HOM05D006817 ORTHO05D008603 3.4e-91 339.7 378 53.7
arahy.Tifrunner.gnm1.ann1.6ZT9VY Arachis hypogaea HOM05D006817 ORTHO05D008603 9.9e-91 338.2 470 45.7
MD01G1164100 Malus domestica HOM05D006817 ORTHO05D008603 9.9e-91 338.2 369 53.1
arahy.Tifrunner.gnm1.ann1.6QBV89 Arachis hypogaea HOM05D006817 ORTHO05D008603 1.3e-90 337.8 470 45.7
vmacro09974 Vaccinium macrocarpon HOM05D006817 ORTHO05D008603 1.3e-90 337.8 394 51.8
ClCG07G004850 Citrullus lanatus HOM05D006817 ORTHO05D008603 1.7e-90 337.4 372 51.1
CsaV3_5G010750 Cucumis sativus L. HOM05D006817 ORTHO05D008603 1.7e-90 337.4 372 51.1
ATR0681G057 Amborella trichopoda HOM05D006817 ORTHO05D008603 2.9e-90 336.7 364 54.1
Medtr1g007630 Medicago truncatula HOM05D006817 ORTHO05D008603 4.9e-90 335.9 427 48.5
Dinv21831 Davidia involucrata HOM05D004766 ORTHO05D006159 6.4e-90 335.5 482 45.9
MELO3C020113.2 Cucumis melo HOM05D006817 ORTHO05D008603 1.1e-89 334.7 375 50.9
Lalb_Chr22g0360921 Lupinus albus HOM05D006817 ORTHO05D008603 1.1e-89 334.7 456 47.4
Gohir.D10G187300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 1.9e-89 334.0 416 48.1
Prupe.2G261900 Prunus persica HOM05D006817 ORTHO05D008603 1.9e-89 334.0 368 53.8
Lj5g0023407 Lotus japonicus HOM05D006817 ORTHO05D008603 3.2e-89 333.2 361 52.4
CDE04G2280 Ceratophyllum demersum HOM05D006817 ORTHO05D008603 4.2e-89 332.8 429 47.6
TPR.G24539 Trifolium pratense HOM05D006817 ORTHO05D008603 5.4e-89 332.4 434 47.7
Glyma.19G067100 Glycine max HOM05D006817 ORTHO05D008603 9.3e-89 331.6 361 53.5
Psat6g035880 Pisum sativum HOM05D006817 ORTHO05D008603 9.3e-89 331.6 428 47.9
Sed0020006 Sechium edule HOM05D006817 ORTHO05D008603 9.3e-89 331.6 366 51.6
MBI15_g27349_MAGBIO Magnolia biondii HOM05D006817 ORTHO05D008603 1.2e-88 331.3 446 46.9
Thhalv10013352m.g Eutrema salsugineum HOM05D006817 ORTHO05D008603 2.1e-88 330.5 380 52.1
FvH4_7g25670 Fragaria vesca HOM05D006817 ORTHO05D008603 6.0e-88 328.9 379 50.4
Sp6g37510 Schrenkiella parvula HOM05D006817 ORTHO05D008603 6.0e-88 328.9 451 48.6
HanXRQChr15g0493791 Helianthus annuus HOM05D006817 ORTHO05D008603 2.3e-87 327.0 366 52.2
A10p30880 Brassica napus HOM05D006817 ORTHO05D008603 3.9e-87 326.2 464 46.8
COL.COLO4_10038 Corchorus olitorius HOM05D006817 ORTHO05D008603 6.7e-87 325.5 434 47.5
BcaC06g32240 Brassica carinata HOM05D006817 ORTHO05D008603 1.5e-86 324.3 464 46.3
BraA10t45133Z Brassica rapa HOM05D006817 ORTHO05D008603 3.3e-86 323.2 474 46.4
C09p71390 Brassica napus HOM05D006817 ORTHO05D008603 4.8e-85 319.3 464 46.1
BolC9t59902H Brassica oleracea HOM05D006817 ORTHO05D008603 4.8e-85 319.3 469 45.6
EL10Ac2g04256 Beta vulgaris HOM05D006817 ORTHO05D008603 8.1e-85 318.5 353 51.6
CARHR207930 Cardamine hirsuta HOM05D006817 ORTHO05D008603 1.4e-84 317.8 345 53.6
Sabra19G0058300 Salix brachista HOM05D000055 ORTHO05D000057 9.0e-84 315.1 451 45.2
HPP92_019064 Vanilla planifolia HOM05D006817 ORTHO05D008603 1.5e-83 314.3 453 45.0
Manes.10G004900 Manihot esculenta HOM05D006817 ORTHO05D008603 2.6e-83 313.5 324 55.2
HanXRQChr08g0222561 Helianthus annuus HOM05D006817 ORTHO05D008603 5.8e-83 312.4 371 48.5
Zm00001eb406320 Zea mays HOM05D006817 ORTHO05D008603 1.3e-82 311.2 357 50.7
Os12g0112300 Oryza sativa ssp. japonica HOM05D006817 ORTHO05D008603 1.9e-81 307.4 360 48.3
Sc11g0005730 Simmondsia chinensis HOM05D006817 ORTHO05D008603 4.2e-81 306.2 361 49.9
AUR62003430 Chenopodium quinoa HOM05D006817 ORTHO05D008603 1.6e-80 304.3 374 48.9
PSO017G6024 Papaver somniferum HOM05D006817 ORTHO05D008603 2.1e-80 303.9 332 53.6
AT5G05310 Arabidopsis thaliana HOM05D006817 ORTHO05D008603 1.8e-79 300.8 345 52.2
Lj8A57G58 Lonicera japonica HOM05D006817 ORTHO05D008603 4.3e-78 296.2 393 49.1
Aa31LG11G6330 Aethionema arabicum HOM05D006817 ORTHO05D008603 3.7e-77 293.1 386 48.2
AUR62012358 Chenopodium quinoa HOM05D006817 ORTHO05D008603 3.7e-77 293.1 341 51.3
Ah.16g104230 Amaranthus hybridus HOM05D006817 ORTHO05D008603 3.1e-76 290.0 451 43.2
Cfa001223 Carpinus fangiana HOM05D006817 ORTHO05D008603 4.0e-76 289.7 327 52.6
Haze_17339 Corylus avellana HOM05D006817 ORTHO05D008603 7.6e-75 285.4 369 48.5
FAN03G2834 Fragaria x ananassa HOM05D006817 ORTHO05D008603 6.5e-74 282.3 434 41.5
Cpa.g.sc19.86 Carica papaya HOM05D006817 ORTHO05D008603 8.4e-74 282.0 412 47.3
QL08p064576 Quercus lobata HOM05D006817 ORTHO05D008603 3.2e-73 280.0 388 49.0
FAN01G1353 Fragaria x ananassa HOM05D006817 ORTHO05D008603 2.8e-69 266.9 350 46.3
FAN10G2384 Fragaria x ananassa HOM05D006817 ORTHO05D008603 6.9e-68 262.3 296 52.0
Nitab4.5_0000109g0530 Nicotiana tabacum HOM05D006817 ORTHO05D008603 5.1e-63 246.1 171 73.1
CiPaw.02G198400 Carya illinoinensis HOM05D006817 ORTHO05D008603 4.8e-61 239.6 335 46.3
Carub.0006s0424 Capsella rubella HOM05D006817 ORTHO05D008603 5.3e-60 236.1 279 50.2
MSTRG.24128 Avicennia marina HOM05D006817 ORTHO05D008603 2.5e-57 227.3 147 76.9
RcHm_v2.0_Chr1g0371881 Rosa chinensis HOM05D006817 ORTHO05D008603 1.1e-54 218.4 155 69.7
AUR62031486 Chenopodium quinoa HOM05D006817 ORTHO05D008603 3.3e-54 216.9 311 46.0
VMungo0647G0650 Vigna mungo HOM05D006817 ORTHO05D008603 5.3e-52 209.5 203 55.7
SEGI_05100 Sequoiadendron giganteum HOM05D006817 ORTHO05D008603 1.4e-49 201.4 171 57.3
MD07G1231800 Malus domestica HOM05D006817 ORTHO05D008603 3.5e-43 180.3 124 69.4
Oeu020109.1 Olea europaea HOM05D006817 ORTHO05D008603 5.0e-42 176.4 142 64.8
Pp3c22_2490 Physcomitrium patens HOM05D006817 ORTHO05D008603 3.3e-38 163.7 431 33.2
MD07G1231900 Malus domestica HOM05D006817 ORTHO05D008603 8.2e-37 159.1 245 44.5
Ca_12776_v3 Cicer arietinum L. HOM05D006817 ORTHO05D008603 9.4e-33 145.6 152 54.6
RcHm_v2.0_Chr1g0371891 Rosa chinensis HOM05D006817 ORTHO05D008603 1.5e-30 138.3 139 54.7
QL10p038395 Quercus lobata HOM05D006817 ORTHO05D008603 4.8e-29 133.3 185 49.2
QL05p063879 Quercus lobata HOM05D006817 ORTHO05D008603 5.9e-27 126.3 158 50.6
QL03p030054 Quercus lobata HOM05D006817 ORTHO05D008603 2.0e-22 111.3 110 60.0
SEGI_41528 Sequoiadendron giganteum HOM05D006817 ORTHO05D008603 4.4e-22 110.2 128 50.0
QL06p040335 Quercus lobata HOM05D006817 ORTHO05D008603 9.8e-22 109.0 108 60.2
QL09p047975 Quercus lobata HOM05D000176 ORTHO05D000106 1.6e-19 101.7 108 57.4
Hund15836 Selenicereus undatus HOM05D006817 ORTHO05D008603 2.0e-19 101.3 72 69.4
MD05G1328700 Malus domestica HOM05D006817 ORTHO05D008603 8.6e-18 95.9 102 54.9
VMungo0647G0362 Vigna mungo HOM05D006817 ORTHO05D008603 4.0e-15 87.0 121 45.5
QL10p065865 Quercus lobata HOM05D006817 ORTHO05D008603 2.6e-14 84.3 72 65.3
QL08p064573 Quercus lobata HOM05D006817 ORTHO05D008603 1.3e-13 82.0 60 61.7
Cre08.g361000 Chlamydomonas reinhardtii HOM05D006817 ORTHO05D008603 1.7e-10 71.6 396 25.3
Prupe.2G262300 Prunus persica HOM05D006817 ORTHO05D008603 4.4e-06 57.0 109 40.4


User provided reference genes

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