Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_46.g18638 Utricularia gibba HOM05D006196 ORTHO05D007758 1.8e-96 355.9 179 100.0
unitig_37.g12349 Utricularia gibba HOM05D006196 ORTHO05D007758 3.6e-89 331.6 179 91.6
Migut.F00871 Erythranthe guttata HOM05D006196 ORTHO05D007758 1.4e-77 293.1 179 80.4
MSTRG.9056 Avicennia marina HOM05D006196 ORTHO05D007758 9.3e-77 290.4 179 78.8
MSTRG.27569 Avicennia marina HOM05D006196 ORTHO05D007758 2.1e-73 279.3 179 75.4
SalBow6G5730 Salvia bowleyana HOM05D006196 ORTHO05D007758 1.5e-71 273.1 179 75.4
SGA_v2.0_scaffold13G06435 Striga asiatica HOM05D006196 ORTHO05D007758 1.1e-69 266.9 226 63.7
Oeu026604.1 Olea europaea HOM05D006196 ORTHO05D007758 1.8e-64 249.6 178 68.0
Rhsim03G0097800 Rhododendron simsii HOM05D006196 ORTHO05D007758 8.2e-57 224.2 179 62.6
CAN.G645.29 Capsicum annuum HOM05D006196 ORTHO05D007758 3.1e-56 222.2 178 62.9
Nitab4.5_0003590g0020 Nicotiana tabacum HOM05D006196 ORTHO05D007758 5.3e-56 221.5 178 62.9
PGSC0003DMG400023969 Solanum tuberosum HOM05D006196 ORTHO05D007758 2.0e-55 219.5 178 61.8
Nitab4.5_0002586g0080 Nicotiana tabacum HOM05D006196 ORTHO05D007758 2.6e-55 219.2 178 62.4
Actinidia18628 Actinidia chinensis HOM05D006196 ORTHO05D007758 4.5e-55 218.4 179 62.0
Cc02_g09600 Coffea canephora HOM05D006196 ORTHO05D007758 5.8e-55 218.0 179 59.8
Solyc11g006830.2 Solanum lycopersicum HOM05D006196 ORTHO05D007758 5.8e-55 218.0 178 61.8
Sopen11g002750 Solanum pennellii HOM05D006196 ORTHO05D007758 5.8e-55 218.0 178 61.8
CSS0023098 Camellia sinensis var. sinensis HOM05D006196 ORTHO05D007758 7.6e-55 217.6 179 60.9
Hma1.2p1_0457F.1_g156990 Hydrangea macrophylla HOM05D006196 ORTHO05D007758 1.0e-54 217.2 179 59.8
CANSAT56G0980 Cannabis sativa HOM05D006196 ORTHO05D007758 1.7e-54 216.5 176 61.9
ClCG08G008290 Citrullus lanatus HOM05D006196 ORTHO05D007758 2.2e-54 216.1 171 63.2
Lj2C33T17 Lonicera japonica HOM05D006196 ORTHO05D007758 2.2e-54 216.1 184 60.3
MELO3C019897.2 Cucumis melo HOM05D006196 ORTHO05D007758 2.9e-54 215.7 178 60.7
Sed0021157 Sechium edule HOM05D006196 ORTHO05D007758 1.1e-53 213.8 181 60.2
CsaV3_6G004260 Cucumis sativus L. HOM05D006196 ORTHO05D007758 1.4e-53 213.4 178 60.1
GSVIVG01010724001 Vitis vinifera HOM05D006196 ORTHO05D007758 1.4e-53 213.4 173 60.7
Sed0008038 Sechium edule HOM05D006196 ORTHO05D007758 5.5e-53 211.5 180 60.6
THA.LOC104811342 Tarenaya hassleriana HOM05D006196 ORTHO05D007758 5.5e-53 211.5 172 59.3
CiPaw.13G040700 Carya illinoinensis HOM05D006196 ORTHO05D007758 9.3e-53 210.7 179 59.8
Haze_03294 Corylus avellana HOM05D006196 ORTHO05D007758 9.3e-53 210.7 179 58.7
Sc09g0005310 Simmondsia chinensis HOM05D006196 ORTHO05D007758 1.2e-52 210.3 179 58.7
Lj5g0013601 Lotus japonicus HOM05D006196 ORTHO05D007758 1.6e-52 209.9 177 57.1
QL04p046737 Quercus lobata HOM05D006196 ORTHO05D007758 1.6e-52 209.9 178 59.0
TAR623G1022 Trochodendron aralioides HOM05D006196 ORTHO05D007758 2.7e-52 209.1 176 58.5
Potri.010G239700 Populus trichocarpa HOM05D006196 ORTHO05D007758 4.6e-52 208.4 179 57.5
Thecc.10G115000 Theobroma cacao HOM05D006196 ORTHO05D007758 6.1e-52 208.0 176 56.2
Duzib114G0383 Durio zibethinus HOM05D006196 ORTHO05D007758 1.3e-51 206.8 176 56.2
Lsat_1_v5_gn_2_104380 Lactuca sativa HOM05D006196 ORTHO05D007758 1.3e-51 206.8 178 59.6
Glyma.20G111300 Glycine max HOM05D006196 ORTHO05D007758 5.1e-51 204.9 177 55.4
Carub.0005s2088 Capsella rubella HOM05D006196 ORTHO05D007758 8.7e-51 204.1 173 57.8
COL.COLO4_29746 Corchorus olitorius HOM05D006196 ORTHO05D007758 1.1e-50 203.8 176 55.1
Manes.07G086900 Manihot esculenta HOM05D006196 ORTHO05D007758 1.5e-50 203.4 179 57.5
Glyma.10G278400 Glycine max HOM05D006196 ORTHO05D007758 1.9e-50 203.0 177 54.8
HanXRQChr11g0342081 Helianthus annuus HOM05D006196 ORTHO05D007758 2.5e-50 202.6 178 57.3
Sabra10G0187700 Salix brachista HOM05D006196 ORTHO05D007758 2.5e-50 202.6 179 57.0
Cpa.g.sc56.1 Carica papaya HOM05D006196 ORTHO05D007758 3.3e-50 202.2 165 58.8
Lalb_Chr06g0166391 Lupinus albus HOM05D006196 ORTHO05D007758 4.3e-50 201.8 177 55.9
Hund06787 Selenicereus undatus HOM05D006196 ORTHO05D007758 4.3e-50 201.8 160 61.9
MBI01_g16486_MAGBIO Magnolia biondii HOM05D006196 ORTHO05D007758 1.6e-49 199.9 178 55.6
Phvul.007G023000 Phaseolus vulgaris HOM05D006196 ORTHO05D007758 1.6e-49 199.9 177 55.9
VMungo0720G0291 Vigna mungo HOM05D006196 ORTHO05D007758 2.2e-49 199.5 177 55.4
AL5G35330 Arabidopsis lyrata HOM05D006196 ORTHO05D007758 2.8e-49 199.1 173 57.8
arahy.Tifrunner.gnm1.ann1.EL78PJ Arachis hypogaea HOM05D006196 ORTHO05D007758 2.8e-49 199.1 177 52.0
arahy.Tifrunner.gnm1.ann1.N25XM0 Arachis hypogaea HOM05D006196 ORTHO05D007758 2.8e-49 199.1 177 52.0
Manes.10G062200 Manihot esculenta HOM05D006196 ORTHO05D007758 2.8e-49 199.1 179 56.4
TPR.G2427 Trifolium pratense HOM05D006196 ORTHO05D007758 2.8e-49 199.1 177 55.4
AT3G54290 Arabidopsis thaliana HOM05D006196 ORTHO05D007758 4.8e-49 198.4 173 57.2
HanXRQChr07g0194291 Helianthus annuus HOM05D006196 ORTHO05D007758 6.3e-49 198.0 178 55.1
Atru.chr12.1044 Acer truncatum HOM05D006196 ORTHO05D007758 1.1e-48 197.2 160 58.1
Sabra08G0013000 Salix brachista HOM05D006196 ORTHO05D007758 1.1e-48 197.2 177 55.9
Sp5g08100 Schrenkiella parvula HOM05D006196 ORTHO05D007758 1.1e-48 197.2 173 56.1
Lj6g0028083 Lotus japonicus HOM05D006196 ORTHO05D007758 1.8e-48 196.4 179 54.7
Prupe.2G067800 Prunus persica HOM05D006196 ORTHO05D007758 1.8e-48 196.4 178 56.2
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 2.4e-48 196.1 178 52.8
Ah.06g186650 Amaranthus hybridus HOM05D006196 ORTHO05D007758 4.1e-48 195.3 178 53.9
Potri.008G019700 Populus trichocarpa HOM05D006196 ORTHO05D007758 6.9e-48 194.5 160 61.2
TPR.G10627 Trifolium pratense HOM05D006196 ORTHO05D007758 6.9e-48 194.5 179 54.2
ECA238G1493 Erigeron canadensis HOM05D006196 ORTHO05D007758 1.2e-47 193.7 178 55.1
Thhalv10010495m.g Eutrema salsugineum HOM05D006196 ORTHO05D007758 2.0e-47 193.0 173 55.5
TWI38G1704 Tripterygium wilfordii HOM05D006196 ORTHO05D007758 2.6e-47 192.6 160 58.8
A09p47290 Brassica napus HOM05D006196 ORTHO05D007758 7.7e-47 191.0 170 55.9
BraA09t40190Z Brassica rapa HOM05D006196 ORTHO05D007758 1.0e-46 190.7 170 55.3
CARHR164220 Cardamine hirsuta HOM05D006196 ORTHO05D007758 1.0e-46 190.7 173 54.3
Aa31sc392G30 Aethionema arabicum HOM05D006196 ORTHO05D007758 1.3e-46 190.3 160 56.9
Medtr1g111960 Medicago truncatula HOM05D006196 ORTHO05D007758 1.3e-46 190.3 177 52.5
BolC8t50558H Brassica oleracea HOM05D006196 ORTHO05D007758 1.7e-46 189.9 170 55.3
Ca_25660_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 1.7e-46 189.9 177 53.1
Gohir.A05G398600 Gossypium hirsutum HOM05D006196 ORTHO05D007758 1.7e-46 189.9 173 53.2
Gorai.012G020000 Gossypium raimondii HOM05D006196 ORTHO05D007758 1.7e-46 189.9 173 53.2
Psat0s1903g0040 Pisum sativum HOM05D006196 ORTHO05D007758 1.7e-46 189.9 177 54.2
CDE08G0664 Ceratophyllum demersum HOM05D006196 ORTHO05D007758 2.2e-46 189.5 177 52.0
Gohir.D04G017300 Gossypium hirsutum HOM05D006196 ORTHO05D007758 2.2e-46 189.5 173 53.2
Medtr1g050385 Medicago truncatula HOM05D006196 ORTHO05D007758 2.9e-46 189.1 179 53.1
PSO801G0620 Papaver somniferum HOM05D006196 ORTHO05D007758 2.9e-46 189.1 180 52.2
BcaC02g09075 Brassica carinata HOM05D006196 ORTHO05D007758 3.8e-46 188.7 165 55.2
PSO339G1429 Papaver somniferum HOM05D006196 ORTHO05D007758 3.8e-46 188.7 180 52.2
BcaB02g08483 Brassica carinata HOM05D006196 ORTHO05D007758 5.0e-46 188.3 170 55.3
C08p29520 Brassica napus HOM05D006196 ORTHO05D007758 5.0e-46 188.3 170 54.7
BraA04t16248Z Brassica rapa HOM05D006196 ORTHO05D007758 1.4e-45 186.8 165 56.4
MD07G1059000 Malus domestica HOM05D006196 ORTHO05D007758 2.5e-45 186.0 178 51.1
Psat6g093840 Pisum sativum HOM05D006196 ORTHO05D007758 2.5e-45 186.0 179 52.0
ATR0820G221 Amborella trichopoda HOM05D006196 ORTHO05D007758 3.2e-45 185.7 176 52.8
A04p05460 Brassica napus HOM05D006196 ORTHO05D007758 9.4e-45 184.1 165 55.8
MD07G1059300 Malus domestica HOM05D006196 ORTHO05D007758 1.6e-44 183.3 178 50.6
Glyma.10G111100 Glycine max HOM05D006196 ORTHO05D007758 2.1e-44 183.0 179 52.0
Lalb_Chr01g0010431 Lupinus albus HOM05D006196 ORTHO05D007758 4.6e-44 181.8 179 52.5
DCAR_019003 Daucus carota HOM05D006196 ORTHO05D007758 2.3e-43 179.5 179 52.0
BolC4t25389H Brassica oleracea HOM05D006196 ORTHO05D007758 1.7e-41 173.3 166 53.0
C04p38140 Brassica napus HOM05D006196 ORTHO05D007758 6.3e-41 171.4 166 52.4
Peaxi162Scf00173g00018 Petunia axillaris HOM05D006196 ORTHO05D007758 1.4e-40 170.2 132 65.2
Os01g0861700 Oryza sativa ssp. japonica HOM05D006196 ORTHO05D007758 4.5e-31 138.7 171 46.2
Pp3c25_11830 Physcomitrium patens HOM05D006196 ORTHO05D007758 6.5e-30 134.8 164 40.2
Dinv10931 Davidia involucrata HOM05D006196 ORTHO05D007758 1.1e-29 134.0 101 64.4
Zm00001eb147080 Zea mays HOM05D006196 ORTHO05D007758 1.5e-29 133.7 171 43.3
Pp3c13_16840 Physcomitrium patens HOM05D006196 ORTHO05D007758 5.5e-29 131.7 154 42.9
Pp3c16_23080 Physcomitrium patens HOM05D006196 ORTHO05D007758 9.4e-29 131.0 159 40.3
Pp3c12_15440 Physcomitrium patens HOM05D006196 ORTHO05D007758 3.6e-28 129.0 154 40.9
Ciclev10015947m.g Citrus clementina HOM05D006196 ORTHO05D007758 4.7e-28 128.6 159 45.3
SMO198G0051 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 4.7e-28 128.6 156 41.7
SMO146G0289 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 1.0e-27 127.5 157 37.6
Mapoly0016s0155 Marchantia polymorpha HOM05D006196 ORTHO05D007758 2.3e-27 126.3 170 36.5
Pp3c3_21020 Physcomitrium patens HOM05D006196 ORTHO05D007758 2.0e-26 123.2 154 40.9
HPP92_026086 Vanilla planifolia HOM05D006196 ORTHO05D007758 4.8e-25 118.6 162 41.4
HPP92_025137 Vanilla planifolia HOM05D006196 ORTHO05D007758 3.1e-24 115.9 162 41.4
Pp3c6_4750 Physcomitrium patens HOM05D006196 ORTHO05D007758 4.1e-24 115.5 168 33.3
AagrBONN_evm.TU.Sc2ySwM_228.4853 Anthoceros agrestis HOM05D006196 ORTHO05D007758 1.6e-23 113.6 170 35.3
BcaB01g00209 Brassica carinata HOM05D006196 ORTHO05D007758 3.5e-23 112.5 94 59.6
arahy.Tifrunner.gnm1.ann1.5GK804 Arachis hypogaea HOM05D006196 ORTHO05D007758 2.2e-22 109.8 121 45.5
Pp3c16_23090 Physcomitrium patens HOM05D006196 ORTHO05D007758 6.5e-22 108.2 145 35.2
Pp3c25_11860 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.9e-21 106.7 152 34.9
CBR_g31351 Chara braunii HOM05D006196 ORTHO05D007758 6.8e-19 98.2 151 35.8
Actinidia02755 Actinidia chinensis HOM05D006196 ORTHO05D007758 2.8e-17 92.8 86 54.7
arahy.Tifrunner.gnm1.ann1.K1D1LI Arachis hypogaea HOM05D006196 ORTHO05D007758 3.1e-16 89.4 117 42.7
Zm00001eb366830 Zea mays HOM05D006196 ORTHO05D007758 1.6e-15 87.0 118 43.2
Ca_20266_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 1.8e-08 63.5 43 69.8


User provided reference genes

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