Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_46.g18603 Utricularia gibba HOM05D003976 ORTHO05D004711 0.0e+00 1919.4 987 100.0
Migut.F01955 Erythranthe guttata HOM05D003976 ORTHO05D004711 0.0e+00 1320.4 1081 67.3
MSTRG.27486 Avicennia marina HOM05D003976 ORTHO05D004711 0.0e+00 1302.7 1080 66.1
SalBow4G0398 Salvia bowleyana HOM05D003976 ORTHO05D004711 0.0e+00 1275.0 1088 65.5
Oeu007408.1 Olea europaea HOM05D003976 ORTHO05D004711 0.0e+00 1250.7 1077 63.9
Dinv31232 Davidia involucrata HOM05D003976 ORTHO05D004711 0.0e+00 1231.5 1088 62.3
CSS0009675 Camellia sinensis var. sinensis HOM05D003976 ORTHO05D004711 0.0e+00 1228.4 1087 62.6
MD01G1103100 Malus domestica HOM05D003976 ORTHO05D004711 0.0e+00 1224.2 1069 62.9
Nitab4.5_0001450g0090 Nicotiana tabacum HOM05D003976 ORTHO05D004711 0.0e+00 1223.0 1151 60.4
Prupe.2G208700 Prunus persica HOM05D003976 ORTHO05D004711 0.0e+00 1222.6 1071 62.8
Manes.01G054600 Manihot esculenta HOM05D003976 ORTHO05D004711 0.0e+00 1222.2 1065 62.4
Sopen11g004150 Solanum pennellii HOM05D003976 ORTHO05D004711 0.0e+00 1221.5 1079 62.9
TWI63G1397 Tripterygium wilfordii HOM05D003976 ORTHO05D004711 0.0e+00 1221.5 1082 61.6
Solyc11g008340.3 Solanum lycopersicum HOM05D003976 ORTHO05D004711 0.0e+00 1220.7 1079 62.9
Duzib114G0598 Durio zibethinus HOM05D003976 ORTHO05D004711 0.0e+00 1218.4 1074 62.9
GSVIVG01016219001 Vitis vinifera HOM05D003976 ORTHO05D004711 0.0e+00 1217.6 1091 62.0
CANSAT56G1655 Cannabis sativa HOM05D003976 ORTHO05D004711 0.0e+00 1214.5 1075 62.8
Cfa001691 Carpinus fangiana HOM05D003976 ORTHO05D004711 0.0e+00 1214.1 1081 62.5
Thecc.10G083800 Theobroma cacao HOM05D003976 ORTHO05D004711 0.0e+00 1211.1 1081 62.5
Nn4g25176 Nelumbo nucifera HOM05D003976 ORTHO05D004711 0.0e+00 1208.7 1086 61.1
CiPaw.01G268500 Carya illinoinensis HOM05D003976 ORTHO05D004711 0.0e+00 1208.0 1086 61.9
TWI15G0187 Tripterygium wilfordii HOM05D003976 ORTHO05D004711 0.0e+00 1206.4 1080 61.8
TAR633G0511 Trochodendron aralioides HOM05D003976 ORTHO05D004711 0.0e+00 1205.3 1092 61.3
Glyma.10G207900 Glycine max HOM05D003976 ORTHO05D004711 0.0e+00 1203.7 1074 61.6
Lj2C20G12 Lonicera japonica HOM05D003976 ORTHO05D004711 0.0e+00 1203.7 1029 62.8
PGR044G0607 Punica granatum HOM05D003976 ORTHO05D004711 0.0e+00 1203.7 1079 61.2
RcHm_v2.0_Chr1g0362571 Rosa chinensis HOM05D003976 ORTHO05D004711 0.0e+00 1203.3 1073 61.9
Potri.008G035300 Populus trichocarpa HOM05D003976 ORTHO05D004711 0.0e+00 1201.0 1065 62.0
Aqoxy1G01141 Aquilegia oxysepala HOM05D003976 ORTHO05D004711 0.0e+00 1199.9 1087 61.1
Potri.010G227100 Populus trichocarpa HOM05D003976 ORTHO05D004711 0.0e+00 1197.2 1064 62.0
FvH4_7g18760 Fragaria vesca HOM05D003976 ORTHO05D004711 0.0e+00 1196.4 1072 61.7
Lj5g0000763 Lotus japonicus HOM05D003976 ORTHO05D004711 0.0e+00 1195.6 1075 61.0
Sed0018764 Sechium edule HOM05D003976 ORTHO05D004711 0.0e+00 1195.3 1077 61.4
CsaV3_6G036710 Cucumis sativus L. HOM05D003976 ORTHO05D004711 0.0e+00 1194.1 1081 61.4
Glyma.20G182800 Glycine max HOM05D003976 ORTHO05D004711 0.0e+00 1192.6 1085 61.0
Medtr5g017640 Medicago truncatula HOM05D003976 ORTHO05D004711 0.0e+00 1184.1 1070 61.1
Nitab4.5_0001659g0180 Nicotiana tabacum HOM05D003976 ORTHO05D004711 0.0e+00 1181.4 1109 60.6
Ca_00795_v3 Cicer arietinum L. HOM05D003976 ORTHO05D004711 0.0e+00 1180.2 1076 61.1
VMungo0251G3371 Vigna mungo HOM05D003976 ORTHO05D004711 0.0e+00 1180.2 1072 60.9
Lalb_Chr06g0170321 Lupinus albus HOM05D003976 ORTHO05D004711 0.0e+00 1179.9 1077 60.3
PSO063G6915 Papaver somniferum HOM05D003976 ORTHO05D004711 0.0e+00 1178.7 1075 60.5
Medtr8g104855 Medicago truncatula HOM05D003976 ORTHO05D004711 0.0e+00 1176.8 1082 61.0
TPR.G32679 Trifolium pratense HOM05D003976 ORTHO05D004711 0.0e+00 1176.8 1054 62.0
PSO339G0981 Papaver somniferum HOM05D003976 ORTHO05D004711 0.0e+00 1173.3 1080 60.2
Phvul.007G098800 Phaseolus vulgaris HOM05D003976 ORTHO05D004711 0.0e+00 1172.9 1068 61.1
Sc06g0007810 Simmondsia chinensis HOM05D003976 ORTHO05D004711 0.0e+00 1171.0 1066 60.4
THA.LOC104826898 Tarenaya hassleriana HOM05D003976 ORTHO05D004711 0.0e+00 1168.3 1068 61.3
FAN03G2922 Fragaria x ananassa HOM05D003976 ORTHO05D004711 0.0e+00 1165.6 1072 60.4
Nn3g18724 Nelumbo nucifera HOM05D003976 ORTHO05D004711 0.0e+00 1164.4 1020 62.3
Atru.chr12.845 Acer truncatum HOM05D003976 ORTHO05D004711 0.0e+00 1164.1 1042 62.4
FAN06G0006 Fragaria x ananassa HOM05D003976 ORTHO05D004711 0.0e+00 1162.1 1072 60.4
DCAR_019085 Daucus carota HOM05D003976 ORTHO05D004711 0.0e+00 1151.0 1081 60.2
Gohir.D04G001800 Gossypium hirsutum HOM05D003976 ORTHO05D004711 0.0e+00 1145.6 1071 60.0
Gorai.012G002900 Gossypium raimondii HOM05D003976 ORTHO05D004711 0.0e+00 1142.5 1071 59.8
Gohir.A05G414300 Gossypium hirsutum HOM05D003976 ORTHO05D004711 0.0e+00 1141.7 1078 59.9
AT3G10380 Arabidopsis thaliana HOM05D003976 ORTHO05D004711 0.0e+00 1137.1 1068 59.9
ECA238G0457 Erigeron canadensis HOM05D003976 ORTHO05D004711 0.0e+00 1133.6 1055 59.4
MD07G1169800 Malus domestica HOM05D003976 ORTHO05D004711 0.0e+00 1132.1 1031 61.3
C03p44100 Brassica napus HOM05D003976 ORTHO05D004711 0.0e+00 1131.7 1067 59.7
Carub.0003s0956 Capsella rubella HOM05D003976 ORTHO05D004711 0.0e+00 1129.8 1075 59.2
Sp3g08650 Schrenkiella parvula HOM05D003976 ORTHO05D004711 0.0e+00 1126.3 1072 59.4
BolC5t34435H Brassica oleracea HOM05D003976 ORTHO05D004711 0.0e+00 1119.4 1078 58.9
A03p36500 Brassica napus HOM05D003976 ORTHO05D004711 0.0e+00 1118.6 1067 59.6
C05p57780 Brassica napus HOM05D003976 ORTHO05D004711 0.0e+00 1118.2 1078 58.8
CARHR084860 Cardamine hirsuta HOM05D003976 ORTHO05D004711 0.0e+00 1118.2 1066 58.5
HanXRQChr14g0456581 Helianthus annuus HOM05D003976 ORTHO05D004711 0.0e+00 1117.8 1058 57.8
HanXRQChr05g0161261 Helianthus annuus HOM05D003976 ORTHO05D004711 0.0e+00 1117.1 1052 58.8
BolC1t05404H Brassica oleracea HOM05D003976 ORTHO05D004711 0.0e+00 1114.4 1081 58.8
A01p41880 Brassica napus HOM05D003976 ORTHO05D004711 0.0e+00 1111.3 1067 59.0
BraA01t04258Z Brassica rapa HOM05D003976 ORTHO05D004711 0.0e+00 1110.9 1088 58.4
AL3G21710 Arabidopsis lyrata HOM05D003976 ORTHO05D004711 0.0e+00 1110.1 1068 58.8
HanXRQChr14g0455711 Helianthus annuus HOM05D003976 ORTHO05D004711 0.0e+00 1108.2 1059 57.6
A05p38770 Brassica napus HOM05D003976 ORTHO05D004711 0.0e+00 1106.7 1076 58.3
BolC3t16685H Brassica oleracea HOM05D003976 ORTHO05D004711 0.0e+00 1100.1 1067 58.6
BraA03t12817Z Brassica rapa HOM05D003976 ORTHO05D004711 0.0e+00 1098.6 1067 59.0
AUR62023345 Chenopodium quinoa HOM05D003976 ORTHO05D004711 0.0e+00 1095.5 1040 58.5
BcaB04g21214 Brassica carinata HOM05D003976 ORTHO05D004711 0.0e+00 1095.1 1066 58.1
MELO3C019825.2 Cucumis melo HOM05D003976 ORTHO05D004711 0.0e+00 1094.0 1087 57.5
BcaC09g48100 Brassica carinata HOM05D003976 ORTHO05D004711 0.0e+00 1093.2 1047 58.9
Thhalv10019960m.g Eutrema salsugineum HOM05D003976 ORTHO05D004711 0.0e+00 1092.8 1078 57.7
AUR62013811 Chenopodium quinoa HOM05D003976 ORTHO05D004711 0.0e+00 1092.4 1054 57.9
Ciclev10030617m.g Citrus clementina HOM05D003976 ORTHO05D004711 0.0e+00 1085.1 1052 58.9
MBI18_g27471_MAGBIO Magnolia biondii HOM05D003976 ORTHO05D004711 0.0e+00 1083.2 1001 60.4
Lsat_1_v5_gn_2_113061 Lactuca sativa HOM05D003976 ORTHO05D004711 1.0e-310 1070.1 1033 58.6
Oeu033874.1 Olea europaea HOM05D003976 ORTHO05D004711 3.9e-310 1068.1 969 61.7
Haze_16845 Corylus avellana HOM05D003976 ORTHO05D004711 1.5e-309 1066.2 1098 56.6
Sabra08G0023600 Salix brachista HOM05D003976 ORTHO05D004711 2.8e-308 1062.0 1102 55.5
Psat7g009400 Pisum sativum HOM05D003976 ORTHO05D004711 4.0e-307 1058.1 982 60.0
SGA_v2.0_scaffold100G29552 Striga asiatica HOM05D003976 ORTHO05D004711 4.0e-307 1058.1 1262 52.0
HPP92_022853 Vanilla planifolia HOM05D003976 ORTHO05D004711 2.6e-306 1055.4 1087 54.4
Aa31LG3G2960 Aethionema arabicum HOM05D003976 ORTHO05D004711 1.0e-305 1053.5 1072 56.9
Sabra10G0175200 Salix brachista HOM05D003976 ORTHO05D004711 1.9e-304 1049.3 1165 52.9
SEGI_27589 Sequoiadendron giganteum HOM05D003976 ORTHO05D004711 1.3e-302 1043.1 1093 52.5
Zm00001eb330040 Zea mays HOM05D003976 ORTHO05D004711 9.7e-301 1036.9 1065 54.2
BcaC05g29471 Brassica carinata HOM05D003976 ORTHO05D004711 2.2e-300 1035.8 1077 55.8
ClCG08G007720 Citrullus lanatus HOM05D003976 ORTHO05D004711 2.4e-299 1032.3 1045 57.3
Os08g0318500 Oryza sativa ssp. japonica HOM05D003976 ORTHO05D004711 9.0e-299 1030.4 1069 53.5
FAN06G1302 Fragaria x ananassa HOM05D003976 ORTHO05D004711 2.9e-297 1025.4 1063 56.3
CDE10G1014 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 3.6e-295 1018.5 1019 55.5
FAN01G1125 Fragaria x ananassa HOM05D003976 ORTHO05D004711 3.0e-294 1015.4 1057 55.6
EL10Ac1g00696 Beta vulgaris HOM05D003976 ORTHO05D004711 7.4e-293 1010.7 1150 52.3
FAN10G1353 Fragaria x ananassa HOM05D003976 ORTHO05D004711 1.2e-279 966.8 1038 54.6
Eucgr.K02187 Eucalyptus grandis HOM05D003976 ORTHO05D004711 4.1e-275 951.8 854 62.4
arahy.Tifrunner.gnm1.ann1.9SI57B Arachis hypogaea HOM05D003976 ORTHO05D004711 3.0e-262 909.1 1058 51.8
FAN10G3044 Fragaria x ananassa HOM05D003976 ORTHO05D004711 2.0e-261 906.4 1057 51.3
ATR0730G009 Amborella trichopoda HOM05D003976 ORTHO05D004711 2.1e-255 886.3 922 54.1
Hma1.2p1_0384F.1_g140840 Hydrangea macrophylla HOM05D003976 ORTHO05D004711 4.4e-253 878.6 763 63.3
Gohir.D10G210600 Gossypium hirsutum HOM05D003976 ORTHO05D004711 5.9e-250 868.2 883 55.9
Pp3c16_24260 Physcomitrium patens HOM05D003976 ORTHO05D004711 7.0e-243 844.7 1103 45.0
Mapoly0170s0008 Marchantia polymorpha HOM05D003976 ORTHO05D004711 3.5e-242 842.4 1086 45.3
Gorai.011G236100 Gossypium raimondii HOM05D003976 ORTHO05D004711 3.6e-223 779.2 941 50.1
Pp3c3_21120 Physcomitrium patens HOM05D003976 ORTHO05D004711 4.2e-219 765.8 1093 42.5
CiPaw.02G172200 Carya illinoinensis HOM05D003976 ORTHO05D004711 1.4e-214 750.7 643 63.5
QL08p054317 Quercus lobata HOM05D003976 ORTHO05D004711 4.0e-214 749.2 718 60.0
SMO172G0221 Selaginella moellendorffii HOM05D003976 ORTHO05D004711 2.1e-210 736.9 1058 42.3
Pp3c12_15420 Physcomitrium patens HOM05D003976 ORTHO05D004711 5.6e-208 728.8 1084 40.7
Actinidia18607 Actinidia chinensis HOM05D003976 ORTHO05D004711 2.8e-207 726.5 736 56.7
Gohir.A10G202400 Gossypium hirsutum HOM05D003976 ORTHO05D004711 3.3e-184 649.8 775 51.2
COL.COLO4_34215 Corchorus olitorius HOM05D003976 ORTHO05D004711 7.7e-173 612.1 560 62.3
Peaxi162Scf00145g01215 Petunia axillaris HOM05D003976 ORTHO05D004711 3.0e-169 600.1 508 64.0
BraA05t22668Z Brassica rapa HOM05D003976 ORTHO05D004711 3.1e-166 590.1 562 58.5
Peaxi162Scf00145g01214 Petunia axillaris HOM05D003976 ORTHO05D004711 2.0e-165 587.4 585 58.8
arahy.Tifrunner.gnm1.ann1.WBL645 Arachis hypogaea HOM05D003976 ORTHO05D004711 2.6e-160 570.5 600 55.5
AagrBONN_evm.TU.Sc2ySwM_228.4637 Anthoceros agrestis HOM05D003976 ORTHO05D004711 1.4e-158 564.7 739 44.9
CBR_g30687 Chara braunii HOM05D003976 ORTHO05D004711 2.8e-151 540.4 1223 31.0
Hund17145 Selenicereus undatus HOM05D003976 ORTHO05D004711 3.5e-149 533.5 713 46.1
vmacro00386 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 2.3e-140 504.2 848 40.8
COL.COLO4_34214 Corchorus olitorius HOM05D003976 ORTHO05D004711 8.3e-135 485.7 504 55.4
BraA05t22669Z Brassica rapa HOM05D003976 ORTHO05D004711 1.7e-132 478.0 425 62.1
CAN.G321.62 Capsicum annuum HOM05D003976 ORTHO05D004711 1.4e-121 441.8 377 64.2
CDE10G0060 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 1.4e-110 405.2 406 53.7
CiPaw.02G172100 Carya illinoinensis HOM05D003976 ORTHO05D004711 4.7e-106 390.2 370 59.7
Lalb_Chr21g0313681 Lupinus albus HOM05D003976 ORTHO05D004711 1.5e-104 385.2 345 61.4
Rhsim03G0115800 Rhododendron simsii HOM05D003976 ORTHO05D004711 9.3e-94 349.4 359 55.4
Cpa.g.sc53.132 Carica papaya HOM05D003976 ORTHO05D004711 2.1e-90 338.2 319 59.2
vmacro00383 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 2.9e-87 327.8 363 52.6
Cpa.g.sc53.134 Carica papaya HOM05D003976 ORTHO05D004711 2.9e-79 301.2 288 60.8
Lalb_Chr21g0313551 Lupinus albus HOM05D003976 ORTHO05D004711 3.9e-76 290.8 278 58.6
QL08p054329 Quercus lobata HOM05D003976 ORTHO05D004711 2.8e-74 284.6 271 59.0
BcaNung07314 Brassica carinata HOM05D003976 ORTHO05D004711 6.3e-66 256.9 171 76.0
CDE10G0443 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 1.4e-65 255.8 267 54.3
VMungo0720G2709 Vigna mungo HOM05D003976 ORTHO05D004711 5.5e-62 243.8 182 73.1
Cc02_g10920 Coffea canephora HOM05D003976 ORTHO05D004711 3.9e-60 237.7 192 64.1
CDE10G0301 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 4.1e-49 201.1 160 65.0
ATR0730G060 Amborella trichopoda HOM05D003976 ORTHO05D004711 5.3e-49 200.7 137 73.0
PSO478G0690 Papaver somniferum HOM05D003976 ORTHO05D004711 4.5e-48 197.6 123 81.3
HPP92_026132 Vanilla planifolia HOM05D003976 ORTHO05D004711 6.5e-47 193.7 137 71.5
SEGI_25267 Sequoiadendron giganteum HOM05D003976 ORTHO05D004711 4.4e-43 181.0 156 59.6
vmacro00384 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 9.1e-41 173.3 108 75.9
AL491U10010 Arabidopsis lyrata HOM05D003976 ORTHO05D004711 9.1e-33 146.7 103 70.9
Actinidia18608 Actinidia chinensis HOM05D003976 ORTHO05D004711 1.8e-28 132.5 70 87.1
Cc02_g10910 Coffea canephora HOM05D003976 ORTHO05D004711 5.2e-28 131.0 111 63.1
Lsat_1_v5_gn_9_29220 Lactuca sativa HOM05D003976 ORTHO05D006024 9.8e-27 126.7 86 70.9
Lj6g0023100 Lotus japonicus HOM05D003976 ORTHO05D004711 4.9e-26 124.4 103 59.2
SHI08885 Sapria himalayana HOM05D000002 ORTHO05D000001 6.3e-26 124.0 114 55.3
Gohir.D10G210566 Gossypium hirsutum HOM05D003976 ORTHO05D004711 5.4e-25 120.9 72 79.2
TPR.G28835 Trifolium pratense HOM05D003976 ORTHO05D004711 1.2e-24 119.8 76 72.4
Psat7g009440 Pisum sativum HOM05D003976 ORTHO05D004711 2.0e-24 119.0 71 77.5
SHI08886 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-24 119.0 86 72.1
Lsat_1_v5_gn_4_4660 Lactuca sativa HOM05D003976 ORTHO05D004711 5.9e-24 117.5 109 57.8
Cre01.g003050 Chlamydomonas reinhardtii HOM05D003976 ORTHO05D004711 1.5e-22 112.8 208 32.2
TPR.G33031 Trifolium pratense HOM05D003976 ORTHO05D004711 7.3e-22 110.5 84 66.7
Hma1.2p1_0384F.1_g140740 Hydrangea macrophylla HOM05D003976 ORTHO05D004711 2.8e-21 108.6 93 62.4
CAN.G796.1 Capsicum annuum HOM05D003976 ORTHO05D004711 1.8e-20 105.9 111 51.4
Cc06_g17220 Coffea canephora HOM05D003976 ORTHO05D004711 3.0e-20 105.1 81 64.2
vmacro00385 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 8.3e-18 97.1 62 74.2
Lsat_1_v5_gn_6_63420 Lactuca sativa HOM05D003976 ORTHO05D004711 4.3e-14 84.7 71 63.4
vmacro16680 Vaccinium macrocarpon HOM05D002957 ORTHO05D007941 5.6e-14 84.3 62 69.4
vmacro23142 Vaccinium macrocarpon HOM05D002957 ORTHO05D007941 5.6e-14 84.3 62 69.4
HanXRQChr05g0134171 Helianthus annuus HOM05D003976 ORTHO05D004711 4.7e-13 81.3 63 73.0
Cc03_g09730 Coffea canephora HOM05D003976 ORTHO05D004711 3.4e-11 75.1 58 65.5
Hma1.2p1_0384F.1_g140760 Hydrangea macrophylla HOM05D003976 ORTHO05D004711 9.8e-11 73.6 49 71.4
MBI18_g27470_MAGBIO Magnolia biondii HOM05D003976 ORTHO05D004711 2.3e-07 62.4 49 57.1
TPR.G6473 Trifolium pratense HOM05D003976 ORTHO05D004711 9.5e-06 57.0 41 65.9


User provided reference genes

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