Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_46.g18575 Utricularia gibba HOM05D002211 ORTHO05D002206 1.5e-80 302.8 147 100.0
unitig_37.g12278 Utricularia gibba HOM05D002211 ORTHO05D002206 7.2e-35 151.0 110 69.1
SalBow1G6037 Salvia bowleyana HOM05D002211 ORTHO05D002206 5.2e-17 91.7 142 43.0
MSTRG.8176 Avicennia marina HOM05D002211 ORTHO05D002206 2.0e-16 89.7 149 41.6
Oeu001241.1 Olea europaea HOM05D002211 ORTHO05D002206 4.4e-16 88.6 151 39.1
SGA_v2.0_scaffold13G06340 Striga asiatica HOM05D002211 ORTHO05D002206 5.7e-16 88.2 123 43.1
MSTRG.9225 Avicennia marina HOM05D002211 ORTHO05D002206 1.1e-14 84.0 160 39.4
TWI60G0660 Tripterygium wilfordii HOM05D002211 ORTHO05D002206 7.8e-13 77.8 143 39.2
Cpa.g.sc51.66 Carica papaya HOM05D002211 ORTHO05D002206 1.0e-12 77.4 152 39.5
Migut.F02065 Erythranthe guttata HOM05D002211 ORTHO05D002206 1.0e-12 77.4 158 37.3
VMungo1383G1511 Vigna mungo HOM05D002211 ORTHO05D002206 2.9e-12 75.9 130 42.3
Manes.08G147100 Manihot esculenta HOM05D002211 ORTHO05D002206 8.6e-12 74.3 145 38.6
Sabra13G0047200 Salix brachista HOM05D002211 ORTHO05D002206 8.6e-12 74.3 142 35.2
SalBow1G4707 Salvia bowleyana HOM05D002211 ORTHO05D002206 1.1e-11 73.9 39 82.1
RcHm_v2.0_Chr3g0448791 Rosa chinensis HOM05D002211 ORTHO05D002206 1.9e-11 73.2 150 36.0
EL10Ac4g09798 Beta vulgaris HOM05D002211 ORTHO05D002206 2.5e-11 72.8 149 34.2
Potri.013G052600 Populus trichocarpa HOM05D002211 ORTHO05D002206 3.3e-11 72.4 138 37.0
Glyma.03G253400 Glycine max HOM05D002211 ORTHO05D002206 4.3e-11 72.0 151 34.4
Eucgr.H04158 Eucalyptus grandis HOM05D002211 ORTHO05D002206 5.6e-11 71.6 133 38.3
FAN05G1484 Fragaria x ananassa HOM05D002211 ORTHO05D002206 5.6e-11 71.6 154 34.4
Duzib177G1183 Durio zibethinus HOM05D002211 ORTHO05D002206 7.3e-11 71.2 153 35.3
Prupe.6G355600 Prunus persica HOM05D002211 ORTHO05D002206 9.5e-11 70.9 160 32.5
FAN05G1779 Fragaria x ananassa HOM05D002211 ORTHO05D002206 1.2e-10 70.5 159 34.6
FAN05G2499 Fragaria x ananassa HOM05D002211 ORTHO05D002206 1.2e-10 70.5 159 34.6
Nitab4.5_0004201g0020 Nicotiana tabacum HOM05D002211 ORTHO05D002206 1.2e-10 70.5 126 39.7
Rhsim09G0131800 Rhododendron simsii HOM05D002211 ORTHO05D002206 1.2e-10 70.5 144 34.7
CiPaw.07G075600 Carya illinoinensis HOM05D002211 ORTHO05D002206 2.1e-10 69.7 126 41.3
FvH4_6g01210 Fragaria vesca HOM05D002211 ORTHO05D002206 2.1e-10 69.7 159 34.6
Medtr7g116610 Medicago truncatula HOM05D002211 ORTHO05D002206 2.1e-10 69.7 143 33.6
Duzib128G1915 Durio zibethinus HOM05D002211 ORTHO05D002206 2.8e-10 69.3 155 35.5
Gohir.A11G241500 Gossypium hirsutum HOM05D002211 ORTHO05D002206 2.8e-10 69.3 159 31.4
Peaxi162Scf00071g00139 Petunia axillaris HOM05D002211 ORTHO05D002206 2.8e-10 69.3 132 35.6
Psat3g005480 Pisum sativum HOM05D002211 ORTHO05D002206 2.8e-10 69.3 133 37.6
Psat3g005600 Pisum sativum HOM05D002211 ORTHO05D002206 2.8e-10 69.3 146 36.3
Sopen04g021740 Solanum pennellii HOM05D002211 ORTHO05D002206 2.8e-10 69.3 110 38.2
Gohir.D11G250800 Gossypium hirsutum HOM05D002211 ORTHO05D002206 3.6e-10 68.9 159 31.4
PGSC0003DMG400004509 Solanum tuberosum HOM05D002211 ORTHO05D002206 3.6e-10 68.9 114 36.8
TPR.G4687 Trifolium pratense HOM05D002211 ORTHO05D002206 3.6e-10 68.9 143 35.7
FvH4_6g01200 Fragaria vesca HOM05D001040 ORTHO05D002795 4.7e-10 68.6 171 33.3
vmacro10391 Vaccinium macrocarpon HOM05D002211 ORTHO05D002206 4.7e-10 68.6 127 37.8
COL.COLO4_20545 Corchorus olitorius HOM05D002211 ORTHO05D002206 6.1e-10 68.2 160 35.6
Gohir.A11G142300 Gossypium hirsutum HOM05D002211 ORTHO05D002206 6.1e-10 68.2 138 37.7
Phvul.008G137200 Phaseolus vulgaris HOM05D002211 ORTHO05D002206 6.1e-10 68.2 129 40.3
Solyc04g050790.3 Solanum lycopersicum HOM05D002211 ORTHO05D002206 6.1e-10 68.2 110 38.2
ATR0686G227 Amborella trichopoda HOM05D002211 ORTHO05D002206 8.0e-10 67.8 110 38.2
MD10G1152300 Malus domestica HOM05D002211 ORTHO05D002206 8.0e-10 67.8 134 35.1
arahy.Tifrunner.gnm1.ann1.ML5U0X Arachis hypogaea HOM05D002211 ORTHO05D002206 1.0e-09 67.4 158 34.2
Lalb_Chr04g0261851 Lupinus albus HOM05D002211 ORTHO05D002206 1.0e-09 67.4 141 35.5
Sc06g0005240 Simmondsia chinensis HOM05D002211 ORTHO05D002206 1.0e-09 67.4 62 54.8
Thecc.05G260900 Theobroma cacao HOM05D002211 ORTHO05D002206 1.0e-09 67.4 151 34.4
Glyma.18G152300 Glycine max HOM05D002211 ORTHO05D002206 1.4e-09 67.0 130 39.2
Gorai.007G159300 Gossypium raimondii HOM05D002211 ORTHO05D002206 1.4e-09 67.0 133 37.6
MBI07_g35241_MAGBIO Magnolia biondii HOM05D002211 ORTHO05D002206 1.4e-09 67.0 122 36.1
MBI07_g44687_MAGBIO Magnolia biondii HOM05D002211 ORTHO05D002206 1.4e-09 67.0 122 36.1
Manes.09G144900 Manihot esculenta HOM05D002211 ORTHO05D002206 1.4e-09 67.0 154 33.8
Thecc.01G211400 Theobroma cacao HOM05D002211 ORTHO05D002206 1.4e-09 67.0 138 38.4
Haze_23452 Corylus avellana HOM05D002211 ORTHO05D002206 1.8e-09 66.6 133 35.3
Gohir.D13G105700 Gossypium hirsutum HOM05D002211 ORTHO05D002206 1.8e-09 66.6 164 31.1
Lj3g0001912 Lotus japonicus HOM05D002211 ORTHO05D002206 1.8e-09 66.6 134 35.8
Sabra19G0036300 Salix brachista HOM05D002211 ORTHO05D002206 1.8e-09 66.6 151 33.1
Sabra19G0039400 Salix brachista HOM05D002211 ORTHO05D002206 1.8e-09 66.6 151 33.1
TWI32G0781 Tripterygium wilfordii HOM05D002211 ORTHO05D002206 1.8e-09 66.6 145 35.2
Ca_09451_v3 Cicer arietinum L. HOM05D002211 ORTHO05D002206 2.3e-09 66.2 153 34.0
Lsat_1_v5_gn_8_97941 Lactuca sativa HOM05D002211 ORTHO05D002206 2.3e-09 66.2 129 40.3
VMungo0540G2450 Vigna mungo HOM05D002211 ORTHO05D002206 2.3e-09 66.2 123 38.2
COL.COLO4_38590 Corchorus olitorius HOM05D002211 ORTHO05D002206 3.1e-09 65.9 137 37.2
Glyma.19G250900 Glycine max HOM05D002211 ORTHO05D002206 3.1e-09 65.9 161 33.5
Nn1g08275 Nelumbo nucifera HOM05D002211 ORTHO05D002206 3.1e-09 65.9 136 35.3
Psat0s3038g0080 Pisum sativum HOM05D002211 ORTHO05D002206 3.1e-09 65.9 139 36.7
CANSAT01G1044 Cannabis sativa HOM05D002211 ORTHO05D002206 4.0e-09 65.5 135 37.8
Ciclev10022368m.g Citrus clementina HOM05D002211 ORTHO05D002206 4.0e-09 65.5 44 68.2
Duzib138G0235 Durio zibethinus HOM05D002211 ORTHO05D002206 4.0e-09 65.5 138 38.4
Gorai.007G268900 Gossypium raimondii HOM05D002211 ORTHO05D002206 4.0e-09 65.5 163 31.3
Lj1g0002409 Lotus japonicus HOM05D002211 ORTHO05D002206 4.0e-09 65.5 138 32.6
Potri.019G029600 Populus trichocarpa HOM05D002211 ORTHO05D002206 4.0e-09 65.5 151 33.8
Atru.chr6.3550 Acer truncatum HOM05D002211 ORTHO05D002206 5.2e-09 65.1 139 35.3
Ciclev10017076m.g Citrus clementina HOM05D002211 ORTHO05D002206 5.2e-09 65.1 134 35.1
Duzib106G0223 Durio zibethinus HOM05D002211 ORTHO05D002206 5.2e-09 65.1 41 70.7
Gohir.D11G148600 Gossypium hirsutum HOM05D002211 ORTHO05D002206 5.2e-09 65.1 128 38.3
Phvul.006G108100 Phaseolus vulgaris HOM05D002211 ORTHO05D002206 5.2e-09 65.1 162 32.1
Potri.002G250800 Populus trichocarpa HOM05D002211 ORTHO05D002206 5.2e-09 65.1 138 34.8
QL01p047517 Quercus lobata HOM05D002211 ORTHO05D002206 5.2e-09 65.1 70 48.6
Gohir.A07G196800 Gossypium hirsutum HOM05D002211 ORTHO05D002206 6.8e-09 64.7 139 33.8
Gohir.D07G203200 Gossypium hirsutum HOM05D002211 ORTHO05D002206 6.8e-09 64.7 139 33.1
Psat0s3509g0040 Pisum sativum HOM05D002211 ORTHO05D002206 6.8e-09 64.7 145 35.9
HPP92_021397 Vanilla planifolia HOM05D002211 ORTHO05D002206 6.8e-09 64.7 129 38.0
Atru.chr2.1234 Acer truncatum HOM05D002211 ORTHO05D002206 8.9e-09 64.3 62 50.0
Haze_04489 Corylus avellana HOM05D002211 ORTHO05D002206 8.9e-09 64.3 140 37.1
Eucgr.B02173 Eucalyptus grandis HOM05D002211 ORTHO05D002206 8.9e-09 64.3 165 33.9
FAN09G3091 Fragaria x ananassa HOM05D002211 ORTHO05D002206 8.9e-09 64.3 46 65.2
Glyma.03G089800 Glycine max HOM05D002211 ORTHO05D002206 8.9e-09 64.3 128 39.1
Gorai.013G118400 Gossypium raimondii HOM05D002211 ORTHO05D002206 8.9e-09 64.3 157 31.8
MD12G1253400 Malus domestica HOM05D002211 ORTHO05D002206 8.9e-09 64.3 46 65.2
Gorai.001G228600 Gossypium raimondii HOM05D002211 ORTHO05D002206 1.2e-08 63.9 145 33.1
Glyma.08G344400 Glycine max HOM05D002211 ORTHO05D002206 1.5e-08 63.5 130 37.7
Lalb_Chr02g0149321 Lupinus albus HOM05D002211 ORTHO05D002206 1.5e-08 63.5 157 32.5
MD04G1235700 Malus domestica HOM05D002211 ORTHO05D002206 1.5e-08 63.5 46 65.2
Nitab4.5_0000504g0030 Nicotiana tabacum HOM05D002211 ORTHO05D002206 1.5e-08 63.5 33 75.8
THA.LOC104820745 Tarenaya hassleriana HOM05D002211 ORTHO05D002206 1.5e-08 63.5 149 31.5
Prupe.8G190600 Prunus persica HOM05D002211 ORTHO05D002206 2.0e-08 63.2 138 34.8
PGR142G0339 Punica granatum HOM05D002211 ORTHO05D002206 2.0e-08 63.2 37 75.7
ClCG11G010190 Citrullus lanatus HOM05D002211 ORTHO05D002206 2.6e-08 62.8 146 34.2
Hund07149 Selenicereus undatus HOM05D002211 ORTHO05D002206 2.6e-08 62.8 40 70.0
GSVIVG01026373001 Vitis vinifera HOM05D002211 ORTHO05D002206 2.6e-08 62.8 131 36.6
FAN02G1834 Fragaria x ananassa HOM05D002211 ORTHO05D002206 3.4e-08 62.4 46 63.0
VMungo0331G1849 Vigna mungo HOM05D002211 ORTHO05D002206 3.4e-08 62.4 128 39.1
Eucgr.H00728 Eucalyptus grandis HOM05D002211 ORTHO05D002206 4.4e-08 62.0 132 37.1
Lalb_Chr01g0022001 Lupinus albus HOM05D002211 ORTHO05D002206 4.4e-08 62.0 129 38.0
MD05G1159900 Malus domestica HOM05D002211 ORTHO05D002206 4.4e-08 62.0 138 34.8
CSS0000478 Camellia sinensis var. sinensis HOM05D002211 ORTHO05D002206 7.5e-08 61.2 146 34.2
Gorai.N003500 Gossypium raimondii HOM05D002211 ORTHO05D002206 7.5e-08 61.2 141 35.5
Manes.12G053700 Manihot esculenta HOM05D002211 ORTHO05D002206 7.5e-08 61.2 142 31.7
Phvul.010G031300 Phaseolus vulgaris HOM05D002211 ORTHO05D002206 7.5e-08 61.2 128 38.3
TAR633G0017 Trochodendron aralioides HOM05D002211 ORTHO05D002206 7.5e-08 61.2 148 33.1
CANSAT54G2545 Cannabis sativa HOM05D002211 ORTHO05D002206 9.8e-08 60.8 34 76.5
CiPaw.13G055000 Carya illinoinensis HOM05D002211 ORTHO05D002206 9.8e-08 60.8 130 37.7
Glyma.13G008000 Glycine max HOM05D002211 ORTHO05D002206 9.8e-08 60.8 128 35.9
QL09p046170 Quercus lobata HOM05D002211 ORTHO05D002206 9.8e-08 60.8 124 39.5
TAR362G0774 Trochodendron aralioides HOM05D002211 ORTHO05D002206 9.8e-08 60.8 130 34.6
TAR636G2930 Trochodendron aralioides HOM05D002211 ORTHO05D002206 9.8e-08 60.8 128 39.1
Cc09_g03180 Coffea canephora HOM05D002211 ORTHO05D002206 1.3e-07 60.5 34 73.5
MELO3C008671.2 Cucumis melo HOM05D002211 ORTHO05D002206 1.3e-07 60.5 152 36.2
Gohir.D07G167000 Gossypium hirsutum HOM05D002211 ORTHO05D002206 1.3e-07 60.5 140 35.0
RcHm_v2.0_Chr6g0282871 Rosa chinensis HOM05D002211 ORTHO05D002206 1.7e-07 60.1 129 35.7
CiPaw.14G043400 Carya illinoinensis HOM05D002211 ORTHO05D002206 2.2e-07 59.7 124 33.9
CsaV3_2G010180 Cucumis sativus L. HOM05D002211 ORTHO05D002206 2.2e-07 59.7 155 31.0
Lalb_Chr03g0041111 Lupinus albus HOM05D002211 ORTHO05D002206 2.2e-07 59.7 124 34.7
BraA02t05441Z Brassica rapa HOM05D002211 ORTHO05D002206 2.9e-07 59.3 132 33.3
Gohir.A13G102400 Gossypium hirsutum HOM05D002211 ORTHO05D002206 2.9e-07 59.3 158 29.1
TAR365G0725 Trochodendron aralioides HOM05D002211 ORTHO05D002206 2.9e-07 59.3 128 38.3
Gorai.011G084500 Gossypium raimondii HOM05D002211 ORTHO05D002206 3.7e-07 58.9 43 62.8
Sed0010531 Sechium edule HOM05D002211 ORTHO05D002206 3.7e-07 58.9 145 33.8
TWI36G0467 Tripterygium wilfordii HOM05D002211 ORTHO05D002206 3.7e-07 58.9 126 33.3
THA.LOC104818996 Tarenaya hassleriana HOM05D002211 ORTHO05D002206 4.9e-07 58.5 148 30.4
Cpa.g.sc8.75 Carica papaya HOM05D002211 ORTHO05D002206 6.4e-07 58.2 141 34.0
Migut.N00663 Erythranthe guttata HOM05D002211 ORTHO05D002206 6.4e-07 58.2 139 32.4
FvH4_2g17840 Fragaria vesca HOM05D002211 ORTHO05D002206 6.4e-07 58.2 129 34.9
FAN24G0249 Fragaria x ananassa HOM05D002211 ORTHO05D002206 6.4e-07 58.2 129 34.9
THA.LOC104827277 Tarenaya hassleriana HOM05D002211 ORTHO05D002206 6.4e-07 58.2 130 33.1
DCAR_012692 Daucus carota HOM05D002211 ORTHO05D002206 8.3e-07 57.8 133 34.6
FAN15G0122 Fragaria x ananassa HOM05D002211 ORTHO05D002206 8.3e-07 57.8 120 35.8
FAN27G0804 Fragaria x ananassa HOM05D002211 ORTHO05D002206 8.3e-07 57.8 120 35.0
Psat3g004920 Pisum sativum HOM05D002211 ORTHO05D002206 8.3e-07 57.8 110 39.1
MSTRG.17972 Avicennia marina HOM05D002211 ORTHO05D002206 1.1e-06 57.4 145 33.1
MSTRG.18492 Avicennia marina HOM05D002211 ORTHO05D002206 1.1e-06 57.4 131 37.4
A10p21210 Brassica napus HOM05D002211 ORTHO05D002206 1.1e-06 57.4 135 31.9
C09p58640 Brassica napus HOM05D002211 ORTHO05D002206 1.1e-06 57.4 135 31.9
BolC9t58706H Brassica oleracea HOM05D002211 ORTHO05D002206 1.1e-06 57.4 135 31.9
BraA10t44184Z Brassica rapa HOM05D002211 ORTHO05D002206 1.1e-06 57.4 135 32.6
Gohir.D08G053500 Gossypium hirsutum HOM05D002211 ORTHO05D002206 1.1e-06 57.4 43 60.5
Gohir.D10G077733 Gossypium hirsutum HOM05D002211 ORTHO05D002206 1.1e-06 57.4 43 60.5
Nn5g27522 Nelumbo nucifera HOM05D002211 ORTHO05D002206 1.1e-06 57.4 141 34.8
Potri.015G040500 Populus trichocarpa HOM05D002211 ORTHO05D002206 1.1e-06 57.4 44 54.5
SGA_v2.0_scaffold566G52949 Striga asiatica HOM05D002211 ORTHO05D002206 1.1e-06 57.4 143 33.6
BcaB08g36688 Brassica carinata HOM05D002211 ORTHO05D002206 1.4e-06 57.0 136 30.9
Gohir.A07G159400 Gossypium hirsutum HOM05D002211 ORTHO05D002206 1.4e-06 57.0 142 33.1
Gohir.D10G077875 Gossypium hirsutum HOM05D002211 ORTHO05D002206 1.4e-06 57.0 43 60.5
HanXRQChr16g0507881 Helianthus annuus HOM05D002211 ORTHO05D002206 1.4e-06 57.0 125 36.0
Lj1g0027803 Lotus japonicus HOM05D002211 ORTHO05D002206 1.4e-06 57.0 118 33.9
HPP92_024641 Vanilla planifolia HOM05D002211 ORTHO05D002206 1.4e-06 57.0 38 65.8
Aqoxy5G00107 Aquilegia oxysepala HOM05D002211 ORTHO05D002206 1.9e-06 56.6 139 33.8
CDE05G0436 Ceratophyllum demersum HOM05D002211 ORTHO05D002206 1.9e-06 56.6 118 31.4
Dinv10852 Davidia involucrata HOM05D002211 ORTHO05D002206 1.9e-06 56.6 158 31.6
Dinv28814 Davidia involucrata HOM05D002211 ORTHO05D002206 1.9e-06 56.6 138 32.6
Oeu003632.1 Olea europaea HOM05D002211 ORTHO05D002206 1.9e-06 56.6 140 36.4
BolC2t06888H Brassica oleracea HOM05D002211 ORTHO05D002206 2.4e-06 56.2 136 31.6
Gorai.013G198900 Gossypium raimondii HOM05D002211 ORTHO05D002206 2.4e-06 56.2 43 58.1
PSO357G0293 Papaver somniferum HOM05D002211 ORTHO05D002206 2.4e-06 56.2 33 72.7
Psat4g206640 Pisum sativum HOM05D002211 ORTHO05D002206 2.4e-06 56.2 126 32.5
C02p09800 Brassica napus HOM05D002211 ORTHO05D002206 3.2e-06 55.8 137 31.4
Dinv10434 Davidia involucrata HOM05D002211 ORTHO05D002206 3.2e-06 55.8 139 31.7
Sp6g26000 Schrenkiella parvula HOM05D002211 ORTHO05D002206 3.2e-06 55.8 147 28.6
Actinidia30019 Actinidia chinensis HOM05D002211 ORTHO05D002206 5.4e-06 55.1 139 33.8
CARHR194750 Cardamine hirsuta HOM05D002211 ORTHO05D002206 5.4e-06 55.1 111 33.3
Cc01_g16160 Coffea canephora HOM05D002211 ORTHO05D002206 5.4e-06 55.1 158 30.4
Sed0012250 Sechium edule HOM05D002211 ORTHO05D002206 5.4e-06 55.1 131 34.4
arahy.Tifrunner.gnm1.ann1.0TX68Y Arachis hypogaea HOM05D002211 ORTHO05D002206 7.0e-06 54.7 119 34.5
PSO170G3935 Papaver somniferum HOM05D002211 ORTHO05D002206 7.0e-06 54.7 104 36.5
arahy.Tifrunner.gnm1.ann1.PCV855 Arachis hypogaea HOM05D002211 ORTHO05D002206 9.2e-06 54.3 119 34.5
CDE11G1194 Ceratophyllum demersum HOM05D002211 ORTHO05D002206 9.2e-06 54.3 111 34.2


User provided reference genes

Program Settings