Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_46.g18533 Utricularia gibba HOM05D005141 ORTHO05D006250 8.5e-134 480.3 240 100.0
unitig_37.g12225 Utricularia gibba HOM05D005141 ORTHO05D006250 8.9e-83 310.8 240 69.2
SalBow4G0713 Salvia bowleyana HOM05D005141 ORTHO05D006250 2.2e-41 173.3 252 47.2
MSTRG.25868 Avicennia marina HOM05D005141 ORTHO05D006250 2.1e-39 166.8 253 47.8
Migut.A00282 Erythranthe guttata HOM05D005141 ORTHO05D006250 8.4e-33 144.8 248 42.3
Lj7A714G44 Lonicera japonica HOM05D005141 ORTHO05D006250 1.8e-30 137.1 249 41.8
Dinv30204 Davidia involucrata HOM05D005141 ORTHO05D006250 5.1e-30 135.6 254 40.2
Nitab4.5_0005873g0030 Nicotiana tabacum HOM05D005141 ORTHO05D006250 6.7e-30 135.2 252 41.3
Lsat_1_v5_gn_1_43100 Lactuca sativa HOM05D005141 ORTHO05D006250 4.3e-29 132.5 222 41.9
MD15G1116100 Malus domestica HOM05D005141 ORTHO05D006250 4.3e-29 132.5 287 38.3
Prupe.1G467500 Prunus persica HOM05D005141 ORTHO05D006250 7.4e-29 131.7 160 50.0
Nitab4.5_0011669g0010 Nicotiana tabacum HOM05D005141 ORTHO05D006250 9.7e-29 131.3 282 38.7
RcHm_v2.0_Chr6g0312851 Rosa chinensis HOM05D005141 ORTHO05D006250 1.6e-28 130.6 241 40.7
Hma1.2p1_0175F.1_g077130 Hydrangea macrophylla HOM05D005141 ORTHO05D006250 1.1e-27 127.9 262 38.2
Cc08_g08010 Coffea canephora HOM05D005141 ORTHO05D006250 1.8e-27 127.1 251 40.2
QL12p031441 Quercus lobata HOM05D005141 ORTHO05D006250 1.8e-27 127.1 251 39.8
Oeu032487.3 Olea europaea HOM05D005141 ORTHO05D006250 3.1e-27 126.3 236 40.7
ECA233G0036 Erigeron canadensis HOM05D005141 ORTHO05D006250 4.1e-27 125.9 230 40.4
HanXRQChr02g0050641 Helianthus annuus HOM05D005141 ORTHO05D006250 4.1e-27 125.9 231 42.4
arahy.Tifrunner.gnm1.ann1.WUI646 Arachis hypogaea HOM05D005141 ORTHO05D006250 6.9e-27 125.2 196 41.8
CiPaw.07G218200 Carya illinoinensis HOM05D005141 ORTHO05D006250 6.9e-27 125.2 162 46.9
Phvul.009G097300 Phaseolus vulgaris HOM05D005141 ORTHO05D006250 6.9e-27 125.2 194 42.3
Dinv11587 Davidia involucrata HOM05D005141 ORTHO05D006250 9.0e-27 124.8 167 46.1
FAN15G0409 Fragaria x ananassa HOM05D005141 ORTHO05D006250 1.2e-26 124.4 188 44.7
TAR383G0458 Trochodendron aralioides HOM05D005141 ORTHO05D006250 1.2e-26 124.4 290 36.9
FAN20G1096 Fragaria x ananassa HOM05D005141 ORTHO05D006250 2.0e-26 123.6 160 47.5
Glyma.04G071400 Glycine max HOM05D005141 ORTHO05D006250 2.0e-26 123.6 278 37.8
Cfa021484 Carpinus fangiana HOM05D005141 ORTHO05D006250 2.6e-26 123.2 251 37.8
Atru.chr7.2334 Acer truncatum HOM05D005141 ORTHO05D006250 3.4e-26 122.9 241 40.2
Haze_21614 Corylus avellana HOM05D005141 ORTHO05D006250 3.4e-26 122.9 281 36.7
FAN24G3348 Fragaria x ananassa HOM05D005141 ORTHO05D006250 4.5e-26 122.5 188 44.1
CAN.G199.28 Capsicum annuum HOM05D005141 ORTHO05D006250 5.9e-26 122.1 252 39.7
Lj1g0018494 Lotus japonicus HOM05D005141 ORTHO05D006250 5.9e-26 122.1 194 42.8
FAN27G2430 Fragaria x ananassa HOM05D005141 ORTHO05D006250 1.0e-25 121.3 188 44.1
MD08G1137500 Malus domestica HOM05D005141 ORTHO05D006250 1.3e-25 120.9 245 40.0
TPR.G34685 Trifolium pratense HOM05D005141 ORTHO05D006250 1.7e-25 120.6 278 37.4
Manes.03G065500 Manihot esculenta HOM05D005141 ORTHO05D006250 2.9e-25 119.8 253 37.2
VMungo1309G3073 Vigna mungo HOM05D005141 ORTHO05D006250 2.9e-25 119.8 234 37.2
CANSAT25G3062 Cannabis sativa HOM05D005141 ORTHO05D006250 3.8e-25 119.4 169 44.4
Medtr3g107950 Medicago truncatula HOM05D005141 ORTHO05D006250 3.8e-25 119.4 278 37.8
GSVIVG01035797001 Vitis vinifera HOM05D005141 ORTHO05D006250 5.0e-25 119.0 190 43.2
Ca_15703_v3 Cicer arietinum L. HOM05D005141 ORTHO05D006250 6.5e-25 118.6 196 40.8
Sopen06g024010 Solanum pennellii HOM05D005141 ORTHO05D006250 6.5e-25 118.6 252 38.5
SGA_v2.0_scaffold27G11478 Striga asiatica HOM05D005141 ORTHO05D006250 6.5e-25 118.6 270 38.9
TWI34G0135 Tripterygium wilfordii HOM05D005141 ORTHO05D006250 6.5e-25 118.6 169 45.0
PGSC0003DMG400026089 Solanum tuberosum HOM05D005141 ORTHO05D006250 8.5e-25 118.2 250 38.4
Thecc.09G145300 Theobroma cacao HOM05D005141 ORTHO05D006250 8.5e-25 118.2 277 36.8
Ciclev10008356m.g Citrus clementina HOM05D005141 ORTHO05D006250 1.4e-24 117.5 244 38.1
Nn2g11855 Nelumbo nucifera HOM05D005141 ORTHO05D006250 2.5e-24 116.7 254 37.0
Duzib168G0094 Durio zibethinus HOM05D005141 ORTHO05D006250 3.2e-24 116.3 180 43.3
TAR636G0300 Trochodendron aralioides HOM05D005141 ORTHO05D006250 3.2e-24 116.3 188 42.0
Actinidia13429 Actinidia chinensis HOM05D005141 ORTHO05D006250 4.2e-24 115.9 249 36.9
COL.COLO4_24046 Corchorus olitorius HOM05D005141 ORTHO05D006250 5.5e-24 115.5 195 42.1
Potri.018G033700 Populus trichocarpa HOM05D005141 ORTHO05D006250 5.5e-24 115.5 260 35.8
vmacro11124 Vaccinium macrocarpon HOM05D005141 ORTHO05D006250 5.5e-24 115.5 273 36.3
Glyma.06G072700 Glycine max HOM05D005141 ORTHO05D006250 7.2e-24 115.2 165 42.4
Solyc06g065650.3 Solanum lycopersicum HOM05D005141 ORTHO05D006250 7.2e-24 115.2 250 38.0
TAR626G1320 Trochodendron aralioides HOM05D005141 ORTHO05D006250 7.2e-24 115.2 148 47.3
Actinidia13280 Actinidia chinensis HOM05D005141 ORTHO05D006250 1.2e-23 114.4 168 43.5
Lalb_Chr08g0243831 Lupinus albus HOM05D005141 ORTHO05D006250 1.2e-23 114.4 244 38.5
Manes.16G067800 Manihot esculenta HOM05D005141 ORTHO05D006250 1.2e-23 114.4 158 45.6
Gohir.D05G010800 Gossypium hirsutum HOM05D005141 ORTHO05D006250 1.6e-23 114.0 231 39.0
Sabra06G0193700 Salix brachista HOM05D005141 ORTHO05D006250 1.6e-23 114.0 133 48.9
TWI32G0021 Tripterygium wilfordii HOM05D005141 ORTHO05D006250 2.1e-23 113.6 261 36.0
Gorai.009G011200 Gossypium raimondii HOM05D005141 ORTHO05D006250 3.6e-23 112.8 178 42.7
Lalb_Chr23g0268881 Lupinus albus HOM05D005141 ORTHO05D006250 3.6e-23 112.8 290 35.9
Phvul.001G055100 Phaseolus vulgaris HOM05D005141 ORTHO05D006250 3.6e-23 112.8 232 34.1
HanXRQChr13g0402161 Helianthus annuus HOM05D005141 ORTHO05D006250 4.6e-23 112.5 228 39.9
CiPaw.08G014900 Carya illinoinensis HOM05D005141 ORTHO05D006250 6.1e-23 112.1 267 34.5
Duzib187G0541 Durio zibethinus HOM05D005141 ORTHO05D006250 6.1e-23 112.1 182 42.3
Gohir.A05G010100 Gossypium hirsutum HOM05D005141 ORTHO05D006250 6.1e-23 112.1 231 38.5
Sabra18G0034600 Salix brachista HOM05D005141 ORTHO05D006250 6.1e-23 112.1 250 37.2
AL7G19190 Arabidopsis lyrata HOM05D005141 ORTHO05D006250 7.9e-23 111.7 231 38.1
PSO063G0687 Papaver somniferum HOM05D005141 ORTHO05D006250 7.9e-23 111.7 210 38.6
DCAR_022871 Daucus carota HOM05D005141 ORTHO05D006250 1.0e-22 111.3 154 48.1
Eucgr.C01809 Eucalyptus grandis HOM05D005141 ORTHO05D006250 1.0e-22 111.3 234 38.5
Duzib150G1154 Durio zibethinus HOM05D005141 ORTHO05D006250 2.3e-22 110.2 136 47.1
THA.LOC104803820 Tarenaya hassleriana HOM05D005141 ORTHO05D006250 2.3e-22 110.2 235 39.6
ClCG08G012940 Citrullus lanatus HOM05D005141 ORTHO05D006250 3.0e-22 109.8 162 46.9
Peaxi162Scf00545g00034 Petunia axillaris HOM05D005141 ORTHO05D006250 3.0e-22 109.8 277 36.5
BraA01t00550Z Brassica rapa HOM05D005141 ORTHO05D006250 3.9e-22 109.4 202 41.1
arahy.Tifrunner.gnm1.ann1.29TRSQ Arachis hypogaea HOM05D005141 ORTHO05D006250 6.7e-22 108.6 234 35.5
Thhalv10025562m.g Eutrema salsugineum HOM05D005141 ORTHO05D006250 6.7e-22 108.6 202 42.1
Lsat_1_v5_gn_6_22941 Lactuca sativa HOM05D005141 ORTHO05D006250 6.7e-22 108.6 167 43.7
A01p05810 Brassica napus HOM05D005141 ORTHO05D006250 1.1e-21 107.8 203 41.4
PSO782G1260 Papaver somniferum HOM05D005141 ORTHO05D006250 1.1e-21 107.8 245 34.3
AT4G32570 Arabidopsis thaliana HOM05D005141 ORTHO05D006250 2.5e-21 106.7 202 40.6
MBI04_g39529_MAGBIO Magnolia biondii HOM05D005141 ORTHO05D006250 9.7e-21 104.8 275 34.9
AUR62024850 Chenopodium quinoa HOM05D005141 ORTHO05D006250 1.3e-20 104.4 159 42.8
C01p06380 Brassica napus HOM05D005141 ORTHO05D006250 1.7e-20 104.0 197 38.6
Oeu014659.3 Olea europaea HOM05D005141 ORTHO05D006250 1.7e-20 104.0 284 32.0
CsaV3_2G031660 Cucumis sativus L. HOM05D005141 ORTHO05D006250 3.7e-20 102.8 176 43.2
Sp7g30350 Schrenkiella parvula HOM05D005141 ORTHO05D006250 3.7e-20 102.8 203 37.4
Sed0000645 Sechium edule HOM05D005141 ORTHO05D006250 3.7e-20 102.8 164 45.1
MELO3C003675.2 Cucumis melo HOM05D005141 ORTHO05D006250 1.1e-19 101.3 155 43.2
EL10Ac2g02550 Beta vulgaris HOM05D005141 ORTHO05D006250 1.4e-19 100.9 256 33.2
BcaC01g01013 Brassica carinata HOM05D005141 ORTHO05D006250 1.4e-19 100.9 212 37.3
BolC1t00634H Brassica oleracea HOM05D005141 ORTHO05D006250 1.8e-19 100.5 197 38.1
BcaC09g52048 Brassica carinata HOM05D005141 ORTHO05D006250 2.4e-19 100.1 255 36.1
CsaV3_3G046630 Cucumis sativus L. HOM05D005141 ORTHO05D006250 3.1e-19 99.8 151 45.0
Rhsim02G0188600 Rhododendron simsii HOM05D005141 ORTHO05D006250 5.3e-19 99.0 231 38.5
Carub.0007s0798 Capsella rubella HOM05D005141 ORTHO05D006250 6.9e-19 98.6 231 38.5
BcaB03g12752 Brassica carinata HOM05D005141 ORTHO05D006250 9.1e-19 98.2 232 34.9
Aa31LG4G11720 Aethionema arabicum HOM05D005141 ORTHO05D006250 1.5e-18 97.4 207 37.7
BraA08t33764Z Brassica rapa HOM05D005141 ORTHO05D006250 2.0e-18 97.1 235 37.0
ClCG05G017130 Citrullus lanatus HOM05D005141 ORTHO05D006250 3.4e-18 96.3 149 43.6
Sed0008448 Sechium edule HOM05D005141 ORTHO05D006250 3.4e-18 96.3 111 52.3
A08p18120 Brassica napus HOM05D005141 ORTHO05D006250 4.5e-18 95.9 235 37.4
C03p87260 Brassica napus HOM05D005141 ORTHO05D006250 4.5e-18 95.9 213 36.6
BolC3t21027H Brassica oleracea HOM05D005141 ORTHO05D006250 4.5e-18 95.9 213 36.6
FvH4_2g30050 Fragaria vesca HOM05D005141 ORTHO05D006250 5.0e-17 92.4 141 43.3
HPP92_009098 Vanilla planifolia HOM05D005141 ORTHO05D006250 1.1e-16 91.3 172 39.5
AagrBONN_evm.TU.Sc2ySwM_117.408 Anthoceros agrestis HOM05D005141 ORTHO05D006250 3.2e-16 89.7 167 38.9
MELO3C011217.2 Cucumis melo HOM05D005141 ORTHO05D006250 5.5e-16 89.0 187 39.0
SHI18604 Sapria himalayana HOM05D005141 ORTHO05D006250 1.2e-15 87.8 116 48.3
Psat0s1782g0240 Pisum sativum HOM05D005141 ORTHO05D006250 2.7e-15 86.7 229 34.5
Cpa.g.sc91.20 Carica papaya HOM05D005141 ORTHO05D006250 4.7e-15 85.9 141 39.7
SEGI_18535 Sequoiadendron giganteum HOM05D005141 ORTHO05D006250 6.1e-15 85.5 145 39.3
Potri.006G247500 Populus trichocarpa HOM05D005141 ORTHO05D006250 1.4e-14 84.3 233 33.0
Mapoly0079s0053 Marchantia polymorpha HOM05D005141 ORTHO05D006250 1.8e-14 84.0 168 36.9
ATR0083G007 Amborella trichopoda HOM05D005141 ORTHO05D006250 6.7e-14 82.0 166 39.2
SMO143G0273 Selaginella moellendorffii HOM05D005141 ORTHO05D006250 2.0e-13 80.5 144 37.5
Pp3c22_12420 Physcomitrium patens HOM05D005141 ORTHO05D006250 4.4e-13 79.3 134 40.3
MBI01_g37337_MAGBIO Magnolia biondii HOM05D005141 ORTHO05D006250 5.7e-13 79.0 144 43.1
Pp3c19_8700 Physcomitrium patens HOM05D005141 ORTHO05D006250 9.7e-13 78.2 136 40.4
PGR031G2456 Punica granatum HOM05D005141 ORTHO05D006250 8.2e-12 75.1 88 46.6
Glyma.17G205200 Glycine max HOM05D005141 ORTHO05D006250 5.3e-11 72.4 146 32.2
Nn8g39307 Nelumbo nucifera HOM05D005141 ORTHO05D006250 9.1e-11 71.6 236 30.9
Aqoxy81s001 Aquilegia oxysepala HOM05D005141 ORTHO05D006250 1.7e-09 67.4 64 50.0
CSS0000568 Camellia sinensis var. sinensis HOM05D005141 ORTHO05D006250 3.8e-09 66.2 38 73.7


User provided reference genes

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