Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_46.g18518 Utricularia gibba HOM05D003355 ORTHO05D028453 5.5e-65 250.8 121 100.0
EL10Ac1g02148 Beta vulgaris HOM05D003355 ORTHO05D006192 5.2e-23 111.3 58 84.5
EL10Ac3g07470 Beta vulgaris HOM05D003355 ORTHO05D006192 5.2e-23 111.3 58 84.5
EL10Ac2g03332 Beta vulgaris HOM05D003355 ORTHO05D006192 4.4e-22 108.2 58 82.8
Dinv14066 Davidia involucrata HOM05D003355 ORTHO05D006192 4.4e-22 108.2 75 73.3
SalBow3G3003 Salvia bowleyana HOM05D003355 ORTHO05D006192 5.8e-22 107.8 70 74.3
SGA_v2.0_scaffold186G40213 Striga asiatica HOM05D003355 ORTHO05D006192 5.8e-22 107.8 72 75.0
MSTRG.18871 Avicennia marina HOM05D003355 ORTHO05D006192 1.3e-21 106.7 65 75.4
Migut.M01551 Erythranthe guttata HOM05D003355 ORTHO05D006192 4.9e-21 104.8 70 72.9
SalBow8G2178 Salvia bowleyana HOM05D003355 ORTHO05D006192 8.3e-21 104.0 68 72.1
GSVIVG01037891001 Vitis vinifera HOM05D003355 ORTHO05D006192 8.3e-21 104.0 61 75.4
Ah.04g164110 Amaranthus hybridus HOM05D003355 ORTHO05D006192 1.1e-20 103.6 58 77.6
CDE07G1612 Ceratophyllum demersum HOM05D003355 ORTHO05D006192 1.4e-20 103.2 59 78.0
CDE07G1846 Ceratophyllum demersum HOM05D003355 ORTHO05D028453 1.4e-20 103.2 59 78.0
AUR62026608 Chenopodium quinoa HOM05D003355 ORTHO05D006192 1.9e-20 102.8 66 69.7
Nn8g39637 Nelumbo nucifera HOM05D003355 ORTHO05D006192 1.9e-20 102.8 63 77.8
Peaxi162Scf00616g00632 Petunia axillaris HOM05D003355 ORTHO05D006192 1.9e-20 102.8 59 74.6
Hund05007 Selenicereus undatus HOM05D003355 ORTHO05D006192 1.9e-20 102.8 59 76.3
Peaxi162Scf01064g00246 Petunia axillaris HOM05D003355 ORTHO05D006192 3.2e-20 102.1 58 81.0
Peaxi162Scf53097g00004 Petunia axillaris HOM05D003355 ORTHO05D006192 3.2e-20 102.1 58 81.0
CSS0050028 Camellia sinensis var. sinensis HOM05D003355 ORTHO05D006192 4.1e-20 101.7 71 69.0
CAN.G7756.1 Capsicum annuum HOM05D003355 ORTHO05D028453 4.1e-20 101.7 57 80.7
Hma1.2p1_0334F.1_g128710 Hydrangea macrophylla HOM05D003355 ORTHO05D006192 5.4e-20 101.3 68 69.1
CAN.G322.12 Capsicum annuum HOM05D003355 ORTHO05D006192 1.6e-19 99.8 58 77.6
Cc05_g16150 Coffea canephora HOM05D003355 ORTHO05D006192 1.6e-19 99.8 60 75.0
ATR0559G338 Amborella trichopoda HOM05D003355 ORTHO05D006192 2.0e-19 99.4 66 69.7
TAR629G1053 Trochodendron aralioides HOM05D003355 ORTHO05D006192 2.0e-19 99.4 61 73.8
AUR62036327 Chenopodium quinoa HOM05D003355 ORTHO05D006192 6.0e-19 97.8 48 87.5
Rhsim06G0239500 Rhododendron simsii HOM05D003355 ORTHO05D006192 7.8e-19 97.4 62 79.0
PGSC0003DMG400021187 Solanum tuberosum HOM05D003355 ORTHO05D006192 7.8e-19 97.4 57 78.9
vmacro11671 Vaccinium macrocarpon HOM05D003355 ORTHO05D006192 7.8e-19 97.4 70 70.0
Glyma.02G273000 Glycine max HOM05D003355 ORTHO05D006192 1.0e-18 97.1 66 69.7
Os01g0713800 Oryza sativa ssp. japonica HOM05D003355 ORTHO05D006192 1.0e-18 97.1 57 75.4
CiPaw.05G009200 Carya illinoinensis HOM05D003355 ORTHO05D006192 1.3e-18 96.7 55 78.2
Solyc02g069950.3 Solanum lycopersicum HOM05D003355 ORTHO05D006192 1.7e-18 96.3 58 77.6
Sopen02g019090 Solanum pennellii HOM05D003355 ORTHO05D006192 1.7e-18 96.3 58 77.6
Lsat_1_v5_gn_7_68200 Lactuca sativa HOM05D003355 ORTHO05D006192 2.3e-18 95.9 60 70.0
Rhsim10G0069800 Rhododendron simsii HOM05D003355 ORTHO05D006192 3.0e-18 95.5 74 73.0
HPP92_009124 Vanilla planifolia HOM05D003355 ORTHO05D006192 3.0e-18 95.5 58 75.9
AagrBONN_evm.TU.Sc2ySwM_117.1345 Anthoceros agrestis HOM05D003355 ORTHO05D006192 3.9e-18 95.1 69 68.1
Ca_06141_v3 Cicer arietinum L. HOM05D003355 ORTHO05D006192 3.9e-18 95.1 58 75.9
ClCG09G022570 Citrullus lanatus HOM05D003355 ORTHO05D006192 3.9e-18 95.1 61 73.8
Os10g0452800 Oryza sativa ssp. japonica HOM05D003355 ORTHO05D006192 3.9e-18 95.1 69 66.7
PGR142G1845 Punica granatum HOM05D003355 ORTHO05D006192 3.9e-18 95.1 62 72.6
TWI60G1544 Tripterygium wilfordii HOM05D003355 ORTHO05D006192 3.9e-18 95.1 59 78.0
Glyma.14G045600 Glycine max HOM05D003355 ORTHO05D006192 6.6e-18 94.4 72 66.7
MELO3C012627.2 Cucumis melo HOM05D003355 ORTHO05D006192 8.6e-18 94.0 61 72.1
CsaV3_7G022720 Cucumis sativus L. HOM05D003355 ORTHO05D006192 1.1e-17 93.6 61 72.1
Eucgr.F01461 Eucalyptus grandis HOM05D003355 ORTHO05D006192 1.1e-17 93.6 60 73.3
LjContig00564g0020908 Lotus japonicus HOM05D003355 ORTHO05D006192 1.1e-17 93.6 71 66.2
TPR.G11717 Trifolium pratense HOM05D003355 ORTHO05D006192 1.1e-17 93.6 53 79.2
Ciclev10020638m.g Citrus clementina HOM05D003355 ORTHO05D006192 1.9e-17 92.8 51 82.4
QL02p103586 Quercus lobata HOM05D003355 ORTHO05D006192 1.9e-17 92.8 51 86.3
Nitab4.5_0001225g0080 Nicotiana tabacum HOM05D003355 ORTHO05D006192 2.5e-17 92.4 47 85.1
Nitab4.5_0001583g0050 Nicotiana tabacum HOM05D003355 ORTHO05D006192 2.5e-17 92.4 47 85.1
Atru.chr3.4019 Acer truncatum HOM05D003355 ORTHO05D006192 4.3e-17 91.7 61 72.1
Ca_06140_v3 Cicer arietinum L. HOM05D003355 ORTHO05D006192 4.3e-17 91.7 58 74.1
Medtr5g087520 Medicago truncatula HOM05D003355 ORTHO05D006192 4.3e-17 91.7 65 70.8
Phvul.008G209100 Phaseolus vulgaris HOM05D003355 ORTHO05D006192 4.3e-17 91.7 76 63.2
QL02p047945 Quercus lobata HOM05D003355 ORTHO05D006192 4.3e-17 91.7 51 84.3
arahy.Tifrunner.gnm1.ann1.A7H436 Arachis hypogaea HOM05D003355 ORTHO05D006192 5.6e-17 91.3 71 66.2
Sed0012728 Sechium edule HOM05D003355 ORTHO05D006192 5.6e-17 91.3 58 70.7
Psat2g023040 Pisum sativum HOM05D003355 ORTHO05D006192 7.3e-17 90.9 61 70.5
arahy.Tifrunner.gnm1.ann1.WNI1ZF Arachis hypogaea HOM05D003355 ORTHO05D006192 9.5e-17 90.5 71 66.2
BcaB08g37262 Brassica carinata HOM05D003355 ORTHO05D006192 9.5e-17 90.5 107 50.5
A10p28340 Brassica napus HOM05D003355 ORTHO05D006192 9.5e-17 90.5 106 49.1
BraA10t44881Z Brassica rapa HOM05D003355 ORTHO05D006192 9.5e-17 90.5 106 49.1
PSO133G0101 Papaver somniferum HOM05D003355 ORTHO05D006192 9.5e-17 90.5 52 76.9
Mapoly0002s0245 Marchantia polymorpha HOM05D003355 ORTHO05D006192 1.2e-16 90.1 104 49.0
PSO541G1087 Papaver somniferum HOM05D003355 ORTHO05D006192 1.2e-16 90.1 58 74.1
C09p68600 Brassica napus HOM05D003355 ORTHO05D006192 1.6e-16 89.7 106 48.1
BolC9t59602H Brassica oleracea HOM05D003355 ORTHO05D006192 2.1e-16 89.4 106 48.1
Lalb_Chr10g0105821 Lupinus albus HOM05D003355 ORTHO05D006192 2.1e-16 89.4 73 64.4
Gohir.A02G087800 Gossypium hirsutum HOM05D003355 ORTHO05D006192 2.8e-16 89.0 54 74.1
Gohir.D02G102800 Gossypium hirsutum HOM05D003355 ORTHO05D006192 2.8e-16 89.0 54 74.1
Gorai.005G116700 Gossypium raimondii HOM05D003355 ORTHO05D006192 2.8e-16 89.0 54 74.1
BolC2t06320H Brassica oleracea HOM05D003355 ORTHO05D006192 3.6e-16 88.6 107 50.5
CANSAT78G0728 Cannabis sativa HOM05D003355 ORTHO05D006192 3.6e-16 88.6 58 70.7
Potri.007G065500 Populus trichocarpa HOM05D003355 ORTHO05D006192 3.6e-16 88.6 64 64.1
Sabra07G0052100 Salix brachista HOM05D003355 ORTHO05D006192 6.2e-16 87.8 54 74.1
Sp6g34500 Schrenkiella parvula HOM05D003355 ORTHO05D006192 6.2e-16 87.8 60 68.3
BcaC03g13229 Brassica carinata HOM05D003355 ORTHO05D006192 8.1e-16 87.4 107 49.5
COL.COLO4_07227 Corchorus olitorius HOM05D003355 ORTHO05D006192 8.1e-16 87.4 58 70.7
Thecc.09G244300 Theobroma cacao HOM05D003355 ORTHO05D006192 8.1e-16 87.4 61 65.6
TPR.G15674 Trifolium pratense HOM05D003355 ORTHO05D006192 8.1e-16 87.4 51 78.4
Duzib170G1171 Durio zibethinus HOM05D003355 ORTHO05D006192 1.1e-15 87.0 61 65.6
Cpa.g.sc5.209 Carica papaya HOM05D003355 ORTHO05D006192 1.4e-15 86.7 51 78.4
THA.LOC104818391 Tarenaya hassleriana HOM05D003355 ORTHO05D006192 1.8e-15 86.3 61 70.5
FvH4_4g27690 Fragaria vesca HOM05D003355 ORTHO05D006192 2.3e-15 85.9 61 67.2
FAN12G1390 Fragaria x ananassa HOM05D003355 ORTHO05D006192 2.3e-15 85.9 61 67.2
FAN12G1758 Fragaria x ananassa HOM05D003355 ORTHO05D006192 2.3e-15 85.9 61 67.2
FAN22G1021 Fragaria x ananassa HOM05D003355 ORTHO05D006192 2.3e-15 85.9 61 67.2
AL6G18890 Arabidopsis lyrata HOM05D003355 ORTHO05D006192 3.1e-15 85.5 60 68.3
RcHm_v2.0_Chr4g0435531 Rosa chinensis HOM05D003355 ORTHO05D006192 3.1e-15 85.5 61 67.2
Aqoxy4G00025 Aquilegia oxysepala HOM05D003355 ORTHO05D006192 4.0e-15 85.1 53 69.8
FAN07G1422 Fragaria x ananassa HOM05D003355 ORTHO05D006192 4.0e-15 85.1 61 67.2
QL01p011915 Quercus lobata HOM05D003355 ORTHO05D006192 4.0e-15 85.1 57 71.9
Aa31LG3G18130 Aethionema arabicum HOM05D003355 ORTHO05D006192 5.2e-15 84.7 63 63.5
THA.LOC104826152 Tarenaya hassleriana HOM05D003355 ORTHO05D006192 5.2e-15 84.7 61 68.9
Haze_10137 Corylus avellana HOM05D003355 ORTHO05D006192 6.8e-15 84.3 59 69.5
Prupe.1G308200 Prunus persica HOM05D003355 ORTHO05D006192 1.5e-14 83.2 69 62.3
Pp3c24_18710 Physcomitrium patens HOM05D003355 ORTHO05D006192 2.0e-14 82.8 59 64.4
Cfa021382 Carpinus fangiana HOM05D003355 ORTHO05D006192 2.6e-14 82.4 64 64.1
MD16G1045100 Malus domestica HOM05D003355 ORTHO05D006192 2.6e-14 82.4 56 75.0
C02p03610 Brassica napus HOM05D003355 ORTHO05D006192 3.4e-14 82.0 107 46.7
BraA02t04958Z Brassica rapa HOM05D003355 ORTHO05D006192 3.4e-14 82.0 107 46.7
AT5G08420 Arabidopsis thaliana HOM05D003355 ORTHO05D006192 5.8e-14 81.3 60 65.0
MBI07_g21077_MAGBIO Magnolia biondii HOM05D003355 ORTHO05D006192 7.5e-14 80.9 61 62.3
MD13G1044300 Malus domestica HOM05D003355 ORTHO05D006192 9.8e-14 80.5 60 66.7
Thhalv10013751m.g Eutrema salsugineum HOM05D003355 ORTHO05D006192 1.3e-13 80.1 58 63.8
CDE02G4229 Ceratophyllum demersum HOM05D003355 ORTHO05D028453 2.2e-13 79.3 65 56.9
CBR_g23447 Chara braunii HOM05D003355 ORTHO05D006192 6.4e-13 77.8 68 54.4
DCAR_016825 Daucus carota HOM05D003355 ORTHO05D006192 1.1e-12 77.0 63 61.9
Carub.0006s0734 Capsella rubella HOM05D003355 ORTHO05D006192 2.4e-12 75.9 60 61.7
Cre12.g508200 Chlamydomonas reinhardtii HOM05D003355 ORTHO05D006192 5.6e-09 64.7 72 47.2
BolC3t13633H Brassica oleracea HOM05D003355 ORTHO05D006192 9.5e-09 63.9 59 57.6
MCO15G216 Micromonas commoda HOM05D003355 ORTHO05D006192 1.6e-08 63.2 75 46.7
ECA240G2766 Erigeron canadensis HOM05D003355 ORTHO05D006192 3.6e-08 62.0 55 60.0
SMO169G0154 Selaginella moellendorffii HOM05D003355 ORTHO05D006192 3.6e-08 62.0 45 62.2
Duzib150G0383 Durio zibethinus HOM05D003355 ORTHO05D006192 1.1e-07 60.5 40 70.0
BraA03t10346Z Brassica rapa HOM05D003355 ORTHO05D006192 1.4e-07 60.1 62 51.6
BolC2t06203H Brassica oleracea HOM05D003355 ORTHO05D006192 2.6e-06 55.8 31 74.2
BraA02t04852Z Brassica rapa HOM05D003355 ORTHO05D006192 2.6e-06 55.8 31 74.2


User provided reference genes

Program Settings