Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_46.g18488 Utricularia gibba HOM05D004959 ORTHO05D005961 0.0e+00 1562.0 793 100.0
Migut.E00705 Erythranthe guttata HOM05D004959 ORTHO05D005961 2.8e-117 427.2 1161 29.7
Migut.E00612 Erythranthe guttata HOM05D004959 ORTHO05D005961 1.3e-109 401.7 1161 28.9
SGA_v2.0_scaffold36G14263 Striga asiatica HOM05D004959 ORTHO05D005961 5.9e-99 366.3 1116 28.4
Oeu021359.1 Olea europaea HOM05D004959 ORTHO05D005961 3.2e-89 334.0 1178 26.7
SGA_v2.0_scaffold99G29470 Striga asiatica HOM05D004959 ORTHO05D005961 5.7e-86 323.2 1098 26.8
Lj3A850G96 Lonicera japonica HOM05D004959 ORTHO05D005961 2.7e-80 304.3 1125 26.5
Nitab4.5_0000036g0080 Nicotiana tabacum HOM05D004959 ORTHO05D005961 2.0e-78 298.1 1165 26.0
Sopen02g014720 Solanum pennellii HOM05D004959 ORTHO05D005961 5.4e-76 290.0 1164 25.4
Solyc02g064590.2 Solanum lycopersicum HOM05D004959 ORTHO05D005961 1.2e-75 288.9 1167 25.8
Solyc02g064620.2 Solanum lycopersicum HOM05D004959 ORTHO05D005961 1.2e-75 288.9 1167 25.8
PGSC0003DMG400003329 Solanum tuberosum HOM05D004959 ORTHO05D005961 2.0e-75 288.1 1163 24.9
Cc04_g10880 Coffea canephora HOM05D004959 ORTHO05D005961 6.6e-74 283.1 1172 26.7
Nitab4.5_0010326g0010 Nicotiana tabacum HOM05D004959 ORTHO05D005961 1.1e-73 282.3 1144 25.3
Dinv04263 Davidia involucrata HOM05D004959 ORTHO05D005961 8.0e-72 276.2 1174 24.5
Dinv06304 Davidia involucrata HOM05D004959 ORTHO05D005961 1.5e-70 271.9 1173 24.6
CAN.G370.71 Capsicum annuum HOM05D004959 ORTHO05D005961 3.0e-66 257.7 295 46.8
Peaxi162Scf00449g00321 Petunia axillaris HOM05D004959 ORTHO05D005961 4.3e-65 253.8 290 48.3
Rhsim02G0134800 Rhododendron simsii HOM05D004959 ORTHO05D005961 7.5e-62 243.0 1130 24.1
Rhsim01G0101500 Rhododendron simsii HOM05D004959 ORTHO05D005961 1.0e-58 232.6 1133 24.2
Cfa000659 Carpinus fangiana HOM05D004959 ORTHO05D005961 5.0e-58 230.3 289 45.3
vmacro15931 Vaccinium macrocarpon HOM05D004959 ORTHO05D005961 1.5e-57 228.8 1164 24.1
HanXRQChr12g0366411 Helianthus annuus HOM05D004959 ORTHO05D005961 4.7e-56 223.8 1110 22.5
QL04p014466 Quercus lobata HOM05D004959 ORTHO05D005961 6.2e-56 223.4 292 44.2
QL04p014830 Quercus lobata HOM05D004959 ORTHO05D005961 6.2e-56 223.4 292 44.2
Cpa.g.sc30.122 Carica papaya HOM05D004959 ORTHO05D005961 1.1e-55 222.6 1149 23.8
Lsat_1_v5_gn_8_33541 Lactuca sativa HOM05D004959 ORTHO05D005961 1.1e-55 222.6 513 33.5
TWI63G1138 Tripterygium wilfordii HOM05D004959 ORTHO05D005961 2.3e-55 221.5 300 43.7
GSVIVG01032944001 Vitis vinifera HOM05D004959 ORTHO05D005961 2.3e-55 221.5 294 43.2
CiPaw.10G061900 Carya illinoinensis HOM05D004959 ORTHO05D005961 4.0e-55 220.7 290 44.5
Actinidia07601 Actinidia chinensis HOM05D004959 ORTHO05D005961 4.9e-53 213.8 1152 23.6
Hma1.2p1_0137F.1_g062550 Hydrangea macrophylla HOM05D004959 ORTHO05D005961 4.9e-53 213.8 523 31.4
COL.COLO4_18025 Corchorus olitorius HOM05D004959 ORTHO05D005961 6.4e-53 213.4 1133 23.8
Aqoxy3G03508 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 2.4e-52 211.5 289 40.5
Sed0018634 Sechium edule HOM05D004959 ORTHO05D005961 3.2e-52 211.1 291 40.5
Eucgr.I01567 Eucalyptus grandis HOM05D004959 ORTHO05D005961 4.1e-52 210.7 296 40.5
Aqoxy5G03195 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 1.6e-51 208.8 304 39.8
Aqoxy7G01840 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 1.6e-51 208.8 304 39.5
Sabra18G0102400 Salix brachista HOM05D004959 ORTHO05D005961 2.7e-51 208.0 295 41.4
ECA233G2209 Erigeron canadensis HOM05D004959 ORTHO05D005961 4.6e-51 207.2 514 32.3
Potri.018G118800 Populus trichocarpa HOM05D004959 ORTHO05D005961 4.6e-51 207.2 295 41.7
Prupe.3G104300 Prunus persica HOM05D004959 ORTHO05D005961 1.0e-50 206.1 1160 23.0
Thecc.02G004800 Theobroma cacao HOM05D004959 ORTHO05D005961 1.0e-50 206.1 295 41.7
Sc10g0002790 Simmondsia chinensis HOM05D004959 ORTHO05D005961 1.7e-50 205.3 1142 23.1
ClCG09G011850 Citrullus lanatus HOM05D004959 ORTHO05D005961 3.0e-50 204.5 291 40.2
DCAR_026905 Daucus carota HOM05D004959 ORTHO05D005961 6.6e-50 203.4 291 40.9
Ca_18944_v3 Cicer arietinum L. HOM05D004959 ORTHO05D005961 1.5e-49 202.2 281 41.6
AL7G33790 Arabidopsis lyrata HOM05D004959 ORTHO05D005961 3.3e-49 201.1 283 41.7
BraA01t01128Z Brassica rapa HOM05D004959 ORTHO05D005961 5.6e-49 200.3 283 41.0
LjContig00564g0005645 Lotus japonicus HOM05D004959 ORTHO05D005961 5.6e-49 200.3 281 42.0
MD13G1224700 Malus domestica HOM05D004959 ORTHO05D005961 5.6e-49 200.3 285 42.8
MELO3C026444.2 Cucumis melo HOM05D004959 ORTHO05D005961 7.3e-49 199.9 288 40.6
Sp7g18520 Schrenkiella parvula HOM05D004959 ORTHO05D005961 7.3e-49 199.9 283 39.9
CsaV3_5G015760 Cucumis sativus L. HOM05D004959 ORTHO05D005961 1.2e-48 199.1 288 39.6
FAN17G1136 Fragaria x ananassa HOM05D004959 ORTHO05D005961 1.2e-48 199.1 396 34.1
Psat7g167160 Pisum sativum HOM05D004959 ORTHO05D005961 1.2e-48 199.1 281 41.3
EL10Ac2g04300 Beta vulgaris HOM05D004959 ORTHO05D005961 2.1e-48 198.4 293 40.6
AT4G20060 Arabidopsis thaliana HOM05D004959 ORTHO05D005961 2.8e-48 198.0 282 40.8
PSO017G0156 Papaver somniferum HOM05D004959 ORTHO05D005961 4.7e-48 197.2 410 35.6
Lalb_Chr19g0135221 Lupinus albus HOM05D004959 ORTHO05D005961 6.2e-48 196.8 291 38.8
LjContig00564g0002415 Lotus japonicus HOM05D004959 ORTHO05D005961 1.1e-47 196.1 281 41.6
Medtr4g078330 Medicago truncatula HOM05D004959 ORTHO05D005961 1.4e-47 195.7 281 40.6
Oeu021362.1 Olea europaea HOM05D004959 ORTHO05D005961 1.4e-47 195.7 378 36.0
PGR142G3977 Punica granatum HOM05D004959 ORTHO05D005961 1.4e-47 195.7 1145 23.1
PSO478G1937 Papaver somniferum HOM05D004959 ORTHO05D005961 1.8e-47 195.3 392 36.0
HPP92_024644 Vanilla planifolia HOM05D004959 ORTHO05D005961 4.0e-47 194.1 292 39.0
Gohir.D12G047700 Gossypium hirsutum HOM05D004959 ORTHO05D005961 6.8e-47 193.4 291 38.8
CARHR226870 Cardamine hirsuta HOM05D004959 ORTHO05D005961 2.0e-46 191.8 283 41.0
BcaNung06192 Brassica carinata HOM05D004959 ORTHO05D005961 5.8e-46 190.3 287 39.7
VMungo0464G0163 Vigna mungo HOM05D004959 ORTHO05D005961 5.8e-46 190.3 291 39.2
BolC1t01373H Brassica oleracea HOM05D004959 ORTHO05D005961 7.6e-46 189.9 283 39.9
Glyma.19G032700 Glycine max HOM05D004959 ORTHO05D005961 7.6e-46 189.9 291 38.1
Manes.16G050600 Manihot esculenta HOM05D004959 ORTHO05D005961 9.9e-46 189.5 289 37.7
Thhalv10024260m.g Eutrema salsugineum HOM05D004959 ORTHO05D005961 1.3e-45 189.1 288 38.9
CANSAT25G2352 Cannabis sativa HOM05D004959 ORTHO05D005961 1.7e-45 188.7 289 40.5
Carub.0007s2107 Capsella rubella HOM05D004959 ORTHO05D005961 1.7e-45 188.7 287 40.4
MBI07_g42017_MAGBIO Magnolia biondii HOM05D004959 ORTHO05D005961 2.9e-45 188.0 333 36.6
Phvul.004G026300 Phaseolus vulgaris HOM05D004959 ORTHO05D005961 8.4e-45 186.4 289 38.8
C01p14060 Brassica napus HOM05D004959 ORTHO05D005961 1.1e-44 186.0 283 39.2
CSS0018526 Camellia sinensis var. sinensis HOM05D004959 ORTHO05D005961 3.2e-44 184.5 233 45.1
AUR62012329 Chenopodium quinoa HOM05D004959 ORTHO05D005961 5.4e-44 183.7 308 38.6
FAN22G0965 Fragaria x ananassa HOM05D004959 ORTHO05D005961 7.1e-44 183.3 305 37.0
FAN12G3376 Fragaria x ananassa HOM05D004959 ORTHO05D005961 1.2e-43 182.6 305 36.7
FvH4_4g05080 Fragaria vesca HOM05D004959 ORTHO05D005961 2.7e-43 181.4 291 36.8
Gorai.008G050400 Gossypium raimondii HOM05D004959 ORTHO05D005961 2.3e-42 178.3 324 34.9
ATR0037G053 Amborella trichopoda HOM05D004959 ORTHO05D005961 3.0e-42 177.9 406 32.8
Gohir.A12G049000 Gossypium hirsutum HOM05D004959 ORTHO05D005961 8.6e-42 176.4 324 34.9
RcHm_v2.0_Chr4g0396011 Rosa chinensis HOM05D004959 ORTHO05D005961 1.1e-41 176.0 428 32.0
Aa31LG6G2470 Aethionema arabicum HOM05D004959 ORTHO05D005961 9.6e-41 172.9 281 35.9
AUR62022971 Chenopodium quinoa HOM05D004959 ORTHO05D005961 2.1e-40 171.8 308 37.0
Nn3g21093 Nelumbo nucifera HOM05D004959 ORTHO05D005961 4.7e-40 170.6 292 36.3
Lj3g0004583 Lotus japonicus HOM05D004959 ORTHO05D005961 2.4e-39 168.3 281 37.7
MD16G1229900 Malus domestica HOM05D004959 ORTHO05D005961 1.2e-38 166.0 286 37.4
Ah.09g226960 Amaranthus hybridus HOM05D004959 ORTHO05D005961 2.6e-38 164.9 258 41.1
CDE04G0396 Ceratophyllum demersum HOM05D004959 ORTHO05D005961 4.4e-38 164.1 229 38.0
A01p11860 Brassica napus HOM05D004959 ORTHO05D005961 7.6e-38 163.3 263 36.5
Peaxi162Scf00449g00320 Petunia axillaris HOM05D004959 ORTHO05D005961 1.3e-37 162.5 262 38.2
Atru.chr8.667 Acer truncatum HOM05D004959 ORTHO05D005961 1.7e-37 162.2 169 48.5
arahy.Tifrunner.gnm1.ann1.WXF40H Arachis hypogaea HOM05D004959 ORTHO05D005961 3.8e-37 161.0 291 35.7
arahy.Tifrunner.gnm1.ann1.C6XSUD Arachis hypogaea HOM05D004959 ORTHO05D005961 1.9e-36 158.7 281 36.3
Ciclev10014195m.g Citrus clementina HOM05D004959 ORTHO05D005961 1.7e-34 152.1 240 37.1
CSS0032692 Camellia sinensis var. sinensis HOM05D004959 ORTHO05D005961 3.0e-34 151.4 252 37.7
Duzib248G0683 Durio zibethinus HOM05D004959 ORTHO05D005961 1.9e-33 148.7 234 36.8
LjContig00564g0005363 Lotus japonicus HOM05D004959 ORTHO05D005961 1.9e-33 148.7 173 45.7
Zm00001eb126950 Zea mays HOM05D004959 ORTHO05D005961 3.3e-33 147.9 288 32.6
BcaB03g11657 Brassica carinata HOM05D004959 ORTHO05D005961 4.3e-33 147.5 175 45.1
BcaNung06193 Brassica carinata HOM05D004959 ORTHO05D005961 4.3e-33 147.5 184 43.5
SHI28139 Sapria himalayana HOM05D004959 ORTHO05D005961 4.3e-33 147.5 172 44.2
Atru.chr8.666 Acer truncatum HOM05D004959 ORTHO05D005961 5.6e-33 147.1 241 38.2
PSO478G4754 Papaver somniferum HOM05D004959 ORTHO05D005961 5.6e-33 147.1 173 43.9
TAR622G1187 Trochodendron aralioides HOM05D004959 ORTHO05D005961 1.3e-32 146.0 263 36.1
Hma1.2p1_0286F.1_g114200 Hydrangea macrophylla HOM05D004959 ORTHO05D005961 9.0e-31 139.8 256 34.8
HanXRQChr04g0121291 Helianthus annuus HOM05D004959 ORTHO05D005961 1.2e-30 139.4 249 37.8
Glyma.13G054500 Glycine max HOM05D004959 ORTHO05D005961 3.4e-30 137.9 243 36.6
Phvul.005G124450 Phaseolus vulgaris HOM05D004959 ORTHO05D005961 2.9e-29 134.8 168 42.3
SEGI_31831 Sequoiadendron giganteum HOM05D004959 ORTHO05D005961 4.9e-29 134.0 279 31.5
Haze_06165 Corylus avellana HOM05D004959 ORTHO05D005961 2.4e-28 131.7 279 32.6
Mapoly0306s0002 Marchantia polymorpha HOM05D004959 ORTHO05D005961 2.4e-28 131.7 392 30.9
TPR.G23000 Trifolium pratense HOM05D004959 ORTHO05D005961 5.4e-28 130.6 162 43.8
Pp3c21_2460 Physcomitrium patens HOM05D004959 ORTHO05D005961 2.7e-27 128.3 405 30.1
Os01g0188200 Oryza sativa ssp. japonica HOM05D004959 ORTHO05D005961 6.9e-23 113.6 232 31.0
AagrBONN_evm.TU.Sc2ySwM_228.5373 Anthoceros agrestis HOM05D004959 ORTHO05D005961 4.5e-22 110.9 329 29.2
CDE04G1301 Ceratophyllum demersum HOM05D004959 ORTHO05D005961 9.9e-22 109.8 230 32.6
SMO111G0127 Selaginella moellendorffii HOM05D004959 ORTHO05D005961 1.4e-20 105.9 388 28.9
SHI28141 Sapria himalayana HOM05D004959 ORTHO05D005961 2.1e-19 102.1 182 33.0
Psat2g088000 Pisum sativum HOM05D004959 ORTHO05D005961 5.6e-17 94.0 163 38.0
CBR_g16049 Chara braunii HOM05D004959 ORTHO05D005961 2.9e-13 81.6 315 25.7
Ca_14573_v3 Cicer arietinum L. HOM05D004959 ORTHO05D005961 1.3e-08 66.2 115 40.0
TPR.G940 Trifolium pratense HOM05D004959 ORTHO05D005961 6.3e-08 63.9 110 37.3
Atru.chr10.384 Acer truncatum HOM05D004959 ORTHO05D005961 8.2e-08 63.5 212 26.4
Ca_14572_v3 Cicer arietinum L. HOM05D004959 ORTHO05D005961 4.1e-07 61.2 115 39.1


User provided reference genes

Program Settings