Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_46.g18364 Utricularia gibba HOM05D003281 ORTHO05D004128 4.1e-133 478.0 232 100.0
unitig_48.g30290 Utricularia gibba HOM05D003281 ORTHO05D004128 3.4e-95 352.1 212 84.0
unitig_46.g18375 Utricularia gibba HOM05D003281 ORTHO05D004128 4.0e-88 328.6 212 80.7
Dinv18011 Davidia involucrata HOM05D003281 ORTHO05D004128 8.9e-80 300.8 207 72.5
Migut.B00724 Erythranthe guttata HOM05D003281 ORTHO05D004128 8.9e-80 300.8 207 72.0
Nn7g38195 Nelumbo nucifera HOM05D003281 ORTHO05D004128 7.5e-79 297.7 207 72.5
Atru.chr10.431 Acer truncatum HOM05D003281 ORTHO05D004128 2.2e-78 296.2 208 72.1
SalBow1G2706 Salvia bowleyana HOM05D003281 ORTHO05D004128 2.9e-78 295.8 207 72.0
SalBow1G7114 Salvia bowleyana HOM05D003281 ORTHO05D004128 2.9e-78 295.8 207 72.0
Ca_18076_v3 Cicer arietinum L. HOM05D003281 ORTHO05D004128 6.4e-78 294.7 208 72.1
Dinv01965 Davidia involucrata HOM05D003281 ORTHO05D004128 6.4e-78 294.7 207 71.0
Ciclev10014669m.g Citrus clementina HOM05D003281 ORTHO05D004128 1.1e-77 293.9 207 72.0
SGA_v2.0_scaffold6G03254 Striga asiatica HOM05D003281 ORTHO05D004128 1.1e-77 293.9 207 72.0
Glyma.04G133100 Glycine max HOM05D003281 ORTHO05D004128 1.4e-77 293.5 207 71.5
MELO3C002406.2 Cucumis melo HOM05D003281 ORTHO05D004128 1.9e-77 293.1 207 72.0
Sed0004438 Sechium edule HOM05D003281 ORTHO05D004128 1.9e-77 293.1 208 72.6
CANSAT56G2301 Cannabis sativa HOM05D003281 ORTHO05D004128 2.4e-77 292.7 207 71.0
CANSAT56G3182 Cannabis sativa HOM05D003281 ORTHO05D004128 2.4e-77 292.7 207 71.0
GSVIVG01012120001 Vitis vinifera HOM05D003281 ORTHO05D004128 2.4e-77 292.7 207 71.5
VMungo1080G1879 Vigna mungo HOM05D003281 ORTHO05D004128 3.2e-77 292.4 207 71.0
CsaV3_1G010170 Cucumis sativus L. HOM05D003281 ORTHO05D004128 4.1e-77 292.0 207 71.5
Phvul.005G018700 Phaseolus vulgaris HOM05D003281 ORTHO05D004128 4.1e-77 292.0 207 71.0
TWI34G0807 Tripterygium wilfordii HOM05D003281 ORTHO05D004128 5.4e-77 291.6 207 71.5
ClCG03G004230 Citrullus lanatus HOM05D003281 ORTHO05D004128 7.0e-77 291.2 207 71.5
Duzib132G1085 Durio zibethinus HOM05D003281 ORTHO05D004128 7.0e-77 291.2 207 71.0
Glyma.11G158400 Glycine max HOM05D003281 ORTHO05D004128 7.0e-77 291.2 207 71.0
HanXRQChr13g0406911 Helianthus annuus HOM05D003281 ORTHO05D004128 9.2e-77 290.8 207 70.5
SGA_v2.0_scaffold254G45247 Striga asiatica HOM05D003281 ORTHO05D004128 9.2e-77 290.8 207 71.5
Eucgr.A00733 Eucalyptus grandis HOM05D003281 ORTHO05D004128 1.2e-76 290.4 207 71.5
Gorai.002G136700 Gossypium raimondii HOM05D003281 ORTHO05D004128 1.2e-76 290.4 207 71.0
Lsat_1_v5_gn_4_97540 Lactuca sativa HOM05D003281 ORTHO05D004128 1.2e-76 290.4 207 69.6
SGA_v2.0_scaffold202G41492 Striga asiatica HOM05D003281 ORTHO05D004128 1.2e-76 290.4 207 71.5
TPR.G1398 Trifolium pratense HOM05D003281 ORTHO05D004128 1.2e-76 290.4 208 72.1
Psat5g186600 Pisum sativum HOM05D003281 ORTHO05D004128 1.6e-76 290.0 208 72.1
Gohir.A01G124000 Gossypium hirsutum HOM05D003281 ORTHO05D004128 2.0e-76 289.7 207 71.0
ECA232G1899 Erigeron canadensis HOM05D003281 ORTHO05D004128 2.7e-76 289.3 207 69.6
Manes.08G044300 Manihot esculenta HOM05D003281 ORTHO05D004128 2.7e-76 289.3 207 70.0
Medtr5g095820 Medicago truncatula HOM05D003281 ORTHO05D004128 2.7e-76 289.3 208 71.6
MSTRG.16470 Avicennia marina HOM05D003281 ORTHO05D004128 3.5e-76 288.9 207 71.0
Psat5g222920 Pisum sativum HOM05D003281 ORTHO05D004128 3.5e-76 288.9 208 71.6
TPR.G6549 Trifolium pratense HOM05D003281 ORTHO05D004128 4.6e-76 288.5 208 71.6
Eucgr.A00708 Eucalyptus grandis HOM05D003281 ORTHO05D004128 7.8e-76 287.7 207 70.5
TAR626G1141 Trochodendron aralioides HOM05D003281 ORTHO05D004128 7.8e-76 287.7 207 70.0
COL.COLO4_17637 Corchorus olitorius HOM05D003281 ORTHO05D004128 1.0e-75 287.3 207 70.5
Gorai.008G050100 Gossypium raimondii HOM05D003281 ORTHO05D004128 1.3e-75 287.0 207 70.0
arahy.Tifrunner.gnm1.ann1.D0LQY1 Arachis hypogaea HOM05D003281 ORTHO05D004128 1.7e-75 286.6 208 69.2
Gohir.D01G111800 Gossypium hirsutum HOM05D003281 ORTHO05D004128 1.7e-75 286.6 207 70.5
Gohir.D12G047400 Gossypium hirsutum HOM05D003281 ORTHO05D004128 1.7e-75 286.6 207 70.0
Peaxi162Scf00199g00516 Petunia axillaris HOM05D003281 ORTHO05D004128 1.7e-75 286.6 207 70.0
Ah.01g022040 Amaranthus hybridus HOM05D003281 ORTHO05D004128 2.3e-75 286.2 209 70.8
arahy.Tifrunner.gnm1.ann1.F6IBWZ Arachis hypogaea HOM05D003281 ORTHO05D004128 2.3e-75 286.2 208 69.2
DCAR_001294 Daucus carota HOM05D003281 ORTHO05D004128 2.3e-75 286.2 209 70.3
BolC4t22966H Brassica oleracea HOM05D003281 ORTHO05D004128 3.0e-75 285.8 209 70.3
FAN26G3221 Fragaria x ananassa HOM05D003281 ORTHO05D004128 3.0e-75 285.8 207 69.6
Nitab4.5_0000443g0070 Nicotiana tabacum HOM05D003281 ORTHO05D004128 3.0e-75 285.8 207 69.6
Nitab4.5_0006246g0040 Nicotiana tabacum HOM05D003281 ORTHO05D004128 3.0e-75 285.8 207 69.6
BcaB02g09485 Brassica carinata HOM05D003281 ORTHO05D004128 3.9e-75 285.4 209 70.3
A05p10660 Brassica napus HOM05D003281 ORTHO05D004128 3.9e-75 285.4 209 70.3
C04p13760 Brassica napus HOM05D003281 ORTHO05D004128 3.9e-75 285.4 209 70.3
BraA05t20007Z Brassica rapa HOM05D003281 ORTHO05D004128 3.9e-75 285.4 209 70.3
Cc02_g28610 Coffea canephora HOM05D003281 ORTHO05D004128 3.9e-75 285.4 208 70.7
Thhalv10016407m.g Eutrema salsugineum HOM05D003281 ORTHO05D004128 3.9e-75 285.4 209 70.3
FvH4_1g24580 Fragaria vesca HOM05D003281 ORTHO05D004128 3.9e-75 285.4 207 69.6
MD12G1033700 Malus domestica HOM05D003281 ORTHO05D004128 3.9e-75 285.4 207 69.6
Cc01_g05380 Coffea canephora HOM05D003281 ORTHO05D004128 5.0e-75 285.0 228 65.4
Lj2A344T44 Lonicera japonica HOM05D003281 ORTHO05D004128 8.6e-75 284.3 208 68.8
FAN19G0112 Fragaria x ananassa HOM05D003281 ORTHO05D004128 1.1e-74 283.9 207 69.1
MD14G1035300 Malus domestica HOM05D003281 ORTHO05D004128 1.1e-74 283.9 210 69.0
RcHm_v2.0_Chr2g0124681 Rosa chinensis HOM05D003281 ORTHO05D004128 1.1e-74 283.9 207 69.1
Duzib248G1352 Durio zibethinus HOM05D003281 ORTHO05D004128 1.5e-74 283.5 207 69.1
AT2G35040 Arabidopsis thaliana HOM05D003281 ORTHO05D004128 1.9e-74 283.1 209 69.9
AL4G31070 Arabidopsis lyrata HOM05D003281 ORTHO05D004128 2.5e-74 282.7 209 69.4
Cc02_g09680 Coffea canephora HOM05D003281 ORTHO05D004128 2.5e-74 282.7 208 69.2
Aa31LG9G16170 Aethionema arabicum HOM05D003281 ORTHO05D004128 3.3e-74 282.3 209 69.9
EL10Ac1g01734 Beta vulgaris HOM05D003281 ORTHO05D004128 3.3e-74 282.3 207 69.6
CARHR129210 Cardamine hirsuta HOM05D003281 ORTHO05D004128 3.3e-74 282.3 209 69.9
Solyc08g075160.3 Solanum lycopersicum HOM05D003281 ORTHO05D004128 3.3e-74 282.3 207 68.1
PGSC0003DMG400020817 Solanum tuberosum HOM05D003281 ORTHO05D004128 3.3e-74 282.3 207 68.1
Cpa.g.sc30.140 Carica papaya HOM05D003281 ORTHO05D004128 4.3e-74 282.0 207 69.1
AUR62034379 Chenopodium quinoa HOM05D003281 ORTHO05D004128 4.3e-74 282.0 227 64.8
FvH4_7g04800 Fragaria vesca HOM05D003281 ORTHO05D004128 4.3e-74 282.0 207 69.1
Sopen08g023790 Solanum pennellii HOM05D003281 ORTHO05D004128 4.3e-74 282.0 207 67.6
Carub.0004s1674 Capsella rubella HOM05D003281 ORTHO05D004128 5.6e-74 281.6 209 68.9
Lalb_Chr07g0189731 Lupinus albus HOM05D003281 ORTHO05D004128 5.6e-74 281.6 208 69.2
PGR004G1969 Punica granatum HOM05D003281 ORTHO05D004128 5.6e-74 281.6 207 69.6
THA.LOC104814352 Tarenaya hassleriana HOM05D003281 ORTHO05D004128 5.6e-74 281.6 208 69.7
Thecc.02G006200 Theobroma cacao HOM05D003281 ORTHO05D004128 5.6e-74 281.6 207 69.6
Aqoxy5G04041 Aquilegia oxysepala HOM05D003281 ORTHO05D004128 1.2e-73 280.4 207 69.1
CAN.G514.6 Capsicum annuum HOM05D003281 ORTHO05D004128 1.2e-73 280.4 207 68.1
EL10Ac5g10906 Beta vulgaris HOM05D003281 ORTHO05D004128 1.6e-73 280.0 207 68.6
AUR62015011 Chenopodium quinoa HOM05D003281 ORTHO05D004128 1.6e-73 280.0 227 64.3
FAN23G2047 Fragaria x ananassa HOM05D003281 ORTHO05D004128 1.6e-73 280.0 207 68.6
THA.LOC104798558 Tarenaya hassleriana HOM05D003281 ORTHO05D004128 1.6e-73 280.0 208 69.2
Prupe.5G007600 Prunus persica HOM05D003281 ORTHO05D004128 4.7e-73 278.5 207 68.1
Potri.010G114400 Populus trichocarpa HOM05D003281 ORTHO05D004128 8.1e-73 277.7 207 67.1
RcHm_v2.0_Chr1g0326741 Rosa chinensis HOM05D003281 ORTHO05D004128 8.1e-73 277.7 207 69.1
MBI14_g44727_MAGBIO Magnolia biondii HOM05D003281 ORTHO05D004128 1.4e-72 276.9 209 68.4
QL11p013631 Quercus lobata HOM05D003281 ORTHO05D004128 2.3e-72 276.2 215 66.5
Hund10057 Selenicereus undatus HOM05D003281 ORTHO05D004128 4.0e-72 275.4 207 69.1
Medtr3g013710 Medicago truncatula HOM05D003281 ORTHO05D004128 5.2e-72 275.0 208 69.2
Lj3g0002589 Lotus japonicus HOM05D003281 ORTHO05D004128 8.9e-72 274.2 207 66.7
Sc26g0004530 Simmondsia chinensis HOM05D003281 ORTHO05D004128 8.9e-72 274.2 230 62.6
ATR0150G008 Amborella trichopoda HOM05D003281 ORTHO05D004128 4.4e-71 271.9 207 66.2
PSO675G6428 Papaver somniferum HOM05D003281 ORTHO05D004128 4.4e-71 271.9 207 67.6
CiPaw.10G062800 Carya illinoinensis HOM05D003281 ORTHO05D004128 5.8e-71 271.6 210 67.1
Os08g0206600 Oryza sativa ssp. japonica HOM05D003281 ORTHO05D004128 7.5e-71 271.2 208 66.3
PSO017G0093 Papaver somniferum HOM05D003281 ORTHO05D004128 9.9e-71 270.8 207 67.6
Zm00001eb413740 Zea mays HOM05D003281 ORTHO05D004128 1.7e-70 270.0 207 65.2
Rhsim01G0054700 Rhododendron simsii HOM05D003281 ORTHO05D004128 6.4e-70 268.1 207 66.7
vmacro14667 Vaccinium macrocarpon HOM05D003281 ORTHO05D004128 5.4e-69 265.0 207 65.7
Rhsim04G0089900 Rhododendron simsii HOM05D003281 ORTHO05D004128 9.2e-69 264.2 207 66.2
Zm00001eb070920 Zea mays HOM05D003281 ORTHO05D004128 2.1e-68 263.1 208 64.4
Hma1.2p1_0181F.1_g079910 Hydrangea macrophylla HOM05D003281 ORTHO05D004128 6.0e-68 261.5 207 65.7
FAN06G1854 Fragaria x ananassa HOM05D003281 ORTHO05D004128 1.7e-67 260.0 263 55.1
FAN15G0156 Fragaria x ananassa HOM05D003281 ORTHO05D004128 2.3e-67 259.6 207 65.7
Cfa000681 Carpinus fangiana HOM05D003281 ORTHO05D004128 1.1e-66 257.3 216 62.5
FAN06G3868 Fragaria x ananassa HOM05D003281 ORTHO05D004128 1.5e-66 256.9 261 54.8
Rhsim04G0089200 Rhododendron simsii HOM05D003281 ORTHO05D004128 1.4e-64 250.4 198 65.2
CBR_g50928 Chara braunii HOM05D003281 ORTHO05D004128 3.1e-64 249.2 209 61.2
CDE06G0368 Ceratophyllum demersum HOM05D003281 ORTHO05D004128 5.2e-64 248.4 208 62.0
HPP92_009463 Vanilla planifolia HOM05D003281 ORTHO05D004128 6.8e-64 248.1 208 60.1
SEGI_14905 Sequoiadendron giganteum HOM05D003281 ORTHO05D004128 8.9e-64 247.7 208 61.5
Pp3c12_24590 Physcomitrium patens HOM05D003281 ORTHO05D004128 1.5e-63 246.9 212 59.9
SMO228G0099 Selaginella moellendorffii HOM05D003281 ORTHO05D004128 3.4e-63 245.7 212 60.4
Pp3c4_1350 Physcomitrium patens HOM05D003281 ORTHO05D004128 1.7e-62 243.4 212 59.0
Mapoly0032s0021 Marchantia polymorpha HOM05D003281 ORTHO05D004128 3.8e-62 242.3 213 59.6
Gohir.A12G048600 Gossypium hirsutum HOM05D003281 ORTHO05D004128 2.4e-61 239.6 207 62.3
FAN01G0101 Fragaria x ananassa HOM05D003281 ORTHO05D004128 3.2e-61 239.2 249 54.2
CSS0018694 Camellia sinensis var. sinensis HOM05D003281 ORTHO05D004128 7.8e-60 234.6 224 57.6
Actinidia11434 Actinidia chinensis HOM05D003281 ORTHO05D004128 1.0e-59 234.2 207 60.9
Sabra10G0084400 Salix brachista HOM05D003281 ORTHO05D004128 1.0e-59 234.2 319 43.9
AagrBONN_evm.TU.Sc2ySwM_368.3406 Anthoceros agrestis HOM05D003281 ORTHO05D004128 1.5e-58 230.3 231 55.4
FAN20G2649 Fragaria x ananassa HOM05D003281 ORTHO05D004128 3.6e-57 225.7 170 67.1
CDE02G3604 Ceratophyllum demersum HOM05D003281 ORTHO05D004128 1.1e-53 214.2 207 57.5
SalBow3G0238 Salvia bowleyana HOM05D003281 ORTHO05D004128 1.9e-53 213.4 204 56.9
MCO04G009 Micromonas commoda HOM05D003281 ORTHO05D004128 1.3e-49 200.7 212 51.4
PRCOL_00001991 Prasinoderma coloniale HOM05D003281 ORTHO05D004128 1.1e-48 197.6 209 52.6
Rhsim01G0111500 Rhododendron simsii HOM05D003281 ORTHO05D004128 2.4e-48 196.4 146 66.4
BcaC02g11585 Brassica carinata HOM05D003281 ORTHO05D004128 3.1e-48 196.1 128 75.8
AUR62022320 Chenopodium quinoa HOM05D003281 ORTHO05D004128 4.0e-48 195.7 147 69.4
Rhsim04G0114800 Rhododendron simsii HOM05D003281 ORTHO05D004128 5.3e-48 195.3 150 63.3
Rhsim04G0092800 Rhododendron simsii HOM05D003281 ORTHO05D004128 2.6e-47 193.0 198 54.0
Cre12.g537581 Chlamydomonas reinhardtii HOM05D003281 ORTHO05D004128 1.1e-40 171.0 166 53.6
Haze_06128 Corylus avellana HOM05D003281 ORTHO05D004128 1.6e-36 157.1 116 69.0
SHI29159 Sapria himalayana HOM05D003281 ORTHO05D000001 3.3e-34 149.4 117 63.2
MD12G1088900 Malus domestica HOM05D003281 ORTHO05D004128 2.4e-32 143.3 113 62.8
Pp3s32_111 Physcomitrium patens HOM05D003281 ORTHO05D004128 2.5e-29 133.3 226 40.3
Haze_26981 Corylus avellana HOM05D003281 ORTHO05D004128 9.7e-26 121.3 208 38.9
HPP92_009499 Vanilla planifolia HOM05D003281 ORTHO05D004128 5.0e-22 109.0 95 55.8
C09p67310 Brassica napus HOM05D012485 ORTHO05D020051 1.1e-16 91.3 139 38.1
BcaC03g16612 Brassica carinata HOM05D012485 ORTHO05D020051 1.8e-16 90.5 139 37.4
C02p44410 Brassica napus HOM05D012485 ORTHO05D020051 1.8e-16 90.5 139 37.4
BraA08t32277Z Brassica rapa HOM05D003281 ORTHO05D020051 2.4e-16 90.1 140 37.9
EL10Ac1g01790 Beta vulgaris HOM05D003281 ORTHO05D004128 3.4e-15 86.3 76 60.5
BolC2t10487H Brassica oleracea HOM05D003281 ORTHO05D020051 3.4e-15 86.3 139 36.7
BcaB05g22512 Brassica carinata HOM05D003281 ORTHO05D020051 4.5e-15 85.9 126 39.7
A04p28850 Brassica napus HOM05D003281 ORTHO05D004128 5.9e-15 85.5 92 51.1
BraA09t41745Z Brassica rapa HOM05D003281 ORTHO05D004128 5.9e-15 85.5 92 51.1
Eucgr.A00699 Eucalyptus grandis HOM05D003281 ORTHO05D004128 1.0e-14 84.7 141 41.1
arahy.Tifrunner.gnm1.ann1.D1T9JW Arachis hypogaea HOM05D003281 ORTHO05D011443 8.5e-14 81.6 85 52.9
EL10Ac1g02079 Beta vulgaris HOM05D003281 ORTHO05D004128 1.6e-12 77.4 64 64.1
Eucgr.L01257 Eucalyptus grandis HOM05D003281 ORTHO05D004128 5.7e-10 68.9 95 44.2
BcaC04g19805 Brassica carinata HOM05D003281 ORTHO05D004128 4.8e-09 65.9 75 50.7
BcaC04g19802 Brassica carinata HOM05D003281 ORTHO05D004128 8.2e-09 65.1 61 59.0
C09p51540 Brassica napus HOM05D003281 ORTHO05D004128 1.4e-08 64.3 58 60.3
BolC9t58009H Brassica oleracea HOM05D003281 ORTHO05D004128 1.4e-08 64.3 58 60.3
BolC9t58011H Brassica oleracea HOM05D003281 ORTHO05D004128 1.4e-08 64.3 58 60.3
A08p02340 Brassica napus HOM05D012485 ORTHO05D020051 1.2e-07 61.2 84 40.5
BcaC04g19680 Brassica carinata HOM05D003281 ORTHO05D032912 7.7e-07 58.5 95 35.8
C09p52850 Brassica napus HOM05D003281 ORTHO05D032912 7.7e-07 58.5 95 35.8
BolC9t58152H Brassica oleracea HOM05D003281 ORTHO05D032912 7.7e-07 58.5 95 35.8
C03p72820 Brassica napus HOM05D003281 ORTHO05D102020 1.7e-06 57.4 94 34.0
A05p32240 Brassica napus HOM05D003281 ORTHO05D004128 3.8e-06 56.2 45 64.4
TPR.G13435 Trifolium pratense HOM05D004715 ORTHO05D005644 8.5e-06 55.1 46 63.0


User provided reference genes

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