Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_46.g18354 Utricularia gibba HOM05D005893 ORTHO05D007295 2.8e-97 358.6 180 100.0
unitig_37.g12607 Utricularia gibba HOM05D000329 ORTHO05D002132 5.9e-63 244.6 184 72.3
Migut.F01727 Erythranthe guttata HOM05D005893 ORTHO05D007295 2.0e-50 203.0 179 62.0
MSTRG.382 Avicennia marina HOM05D005893 ORTHO05D007295 1.8e-48 196.4 185 58.9
SalBow6G7151 Salvia bowleyana HOM05D005893 ORTHO05D007295 3.5e-47 192.2 185 56.8
Nitab4.5_0007148g0010 Nicotiana tabacum HOM05D005893 ORTHO05D007295 3.0e-43 179.1 179 53.6
Oeu021200.1 Olea europaea HOM05D005893 ORTHO05D007295 1.2e-42 177.2 96 83.3
Cpa.g.sc53.97 Carica papaya HOM05D005893 ORTHO05D007295 1.3e-41 173.7 185 54.1
Dinv31297 Davidia involucrata HOM05D005893 ORTHO05D007295 1.7e-41 173.3 182 50.0
Nitab4.5_0002194g0010 Nicotiana tabacum HOM05D005893 ORTHO05D007295 2.2e-41 172.9 178 52.8
Thecc.10G078600 Theobroma cacao HOM05D005893 ORTHO05D002604 3.7e-41 172.2 181 50.3
SalBow7G0798 Salvia bowleyana HOM05D005893 ORTHO05D007295 4.8e-41 171.8 146 58.9
SGA_v2.0_scaffold2G01368 Striga asiatica HOM05D005893 ORTHO05D007295 1.4e-40 170.2 191 51.8
Cc02_g11140 Coffea canephora HOM05D005893 ORTHO05D007295 2.4e-40 169.5 187 51.3
COL.COLO4_38473 Corchorus olitorius HOM05D005893 ORTHO05D007295 2.4e-40 169.5 182 53.3
Actinidia06754 Actinidia chinensis HOM05D005893 ORTHO05D007295 3.1e-40 169.1 183 49.7
Gohir.A05G295100 Gossypium hirsutum HOM05D005893 ORTHO05D007295 5.3e-40 168.3 181 50.3
Glyma.10G209400 Glycine max HOM05D005893 ORTHO05D007295 7.0e-40 167.9 109 68.8
Gorai.009G312400 Gossypium raimondii HOM05D005893 ORTHO05D007295 7.0e-40 167.9 179 52.0
Potri.008G037300 Populus trichocarpa HOM05D005893 ORTHO05D007295 7.0e-40 167.9 184 51.6
DCAR_019095 Daucus carota HOM05D005893 ORTHO05D007295 9.1e-40 167.5 181 49.7
Glyma.20G181200 Glycine max HOM05D005893 ORTHO05D007295 9.1e-40 167.5 109 68.8
Lalb_Chr02g0152261 Lupinus albus HOM05D005893 ORTHO05D007295 9.1e-40 167.5 109 68.8
Haze_16866 Corylus avellana HOM05D005893 ORTHO05D007295 1.2e-39 167.2 120 66.7
Sabra08G0025100 Salix brachista HOM05D005893 ORTHO05D007295 1.2e-39 167.2 183 50.3
CAN.G305.42 Capsicum annuum HOM05D005893 ORTHO05D007295 2.0e-39 166.4 154 57.8
PGSC0003DMG400027152 Solanum tuberosum HOM05D005893 ORTHO05D007295 2.0e-39 166.4 184 50.0
Duzib106G0129 Durio zibethinus HOM05D005893 ORTHO05D007295 2.7e-39 166.0 181 49.7
Nn2g11535 Nelumbo nucifera HOM05D005893 ORTHO05D007295 2.7e-39 166.0 184 51.6
Phvul.007G096700 Phaseolus vulgaris HOM05D005893 ORTHO05D007295 2.7e-39 166.0 109 67.0
MBI05_g31459_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 3.5e-39 165.6 124 66.1
Ciclev10030991m.g Citrus clementina HOM05D003292 ORTHO05D004237 5.9e-39 164.9 131 60.3
Cfa001666 Carpinus fangiana HOM05D005893 ORTHO05D007295 7.7e-39 164.5 186 48.4
VMungo0720G1965 Vigna mungo HOM05D005893 ORTHO05D007295 7.7e-39 164.5 109 67.0
Lj2C17T1 Lonicera japonica HOM05D005893 ORTHO05D007295 1.0e-38 164.1 146 56.8
Sopen05g031760 Solanum pennellii HOM05D005893 ORTHO05D007295 1.0e-38 164.1 191 48.7
CiPaw.01G270700 Carya illinoinensis HOM05D005893 ORTHO05D007295 1.3e-38 163.7 135 57.0
Eucgr.G02856 Eucalyptus grandis HOM05D005893 ORTHO05D007295 1.3e-38 163.7 179 49.7
Hma1.2p1_1458F.1_g284765 Hydrangea macrophylla HOM05D005893 ORTHO05D007295 1.3e-38 163.7 121 66.1
PGR142G3224 Punica granatum HOM05D005893 ORTHO05D007295 1.7e-38 163.3 181 50.8
Gohir.D05G295800 Gossypium hirsutum HOM05D005893 ORTHO05D007295 2.2e-38 162.9 178 52.8
Sc20g0001660 Simmondsia chinensis HOM05D005893 ORTHO05D007295 2.2e-38 162.9 114 69.3
Ca_10554_v3 Cicer arietinum L. HOM05D005893 ORTHO05D007295 5.0e-38 161.8 109 65.1
ClCG05G021120 Citrullus lanatus HOM05D005893 ORTHO05D007295 5.0e-38 161.8 100 72.0
Dinv31211 Davidia involucrata HOM05D005893 ORTHO05D007295 5.0e-38 161.8 121 61.2
CsaV3_5G036140 Cucumis sativus L. HOM05D005893 ORTHO05D007295 6.5e-38 161.4 187 50.3
PSO339G3974 Papaver somniferum HOM05D005893 ORTHO05D007295 6.5e-38 161.4 99 72.7
Hund09872 Selenicereus undatus HOM05D005893 ORTHO05D007295 6.5e-38 161.4 107 66.4
Manes.07G096800 Manihot esculenta HOM05D005893 ORTHO05D007295 8.5e-38 161.0 184 49.5
THA.LOC104825224 Tarenaya hassleriana HOM05D005893 ORTHO05D007295 8.5e-38 161.0 152 55.9
Cfa014465 Carpinus fangiana HOM05D005893 ORTHO05D007295 1.1e-37 160.6 98 72.4
Psat6g182280 Pisum sativum HOM05D005893 ORTHO05D007295 1.1e-37 160.6 169 48.5
QL08p055159 Quercus lobata HOM05D005893 ORTHO05D007295 1.9e-37 159.8 120 62.5
Atru.chr12.817 Acer truncatum HOM05D005893 ORTHO05D007295 2.5e-37 159.5 179 49.2
ATR0680G313 Amborella trichopoda HOM05D005893 ORTHO05D007295 2.5e-37 159.5 106 67.0
CSS0031267 Camellia sinensis var. sinensis HOM05D005182 ORTHO05D006631 2.5e-37 159.5 93 75.3
TAR633G2388 Trochodendron aralioides HOM05D005893 ORTHO05D007295 2.5e-37 159.5 187 47.1
MELO3C012415.2 Cucumis melo HOM05D005893 ORTHO05D007295 3.2e-37 159.1 189 48.7
Sed0005810 Sechium edule HOM05D005893 ORTHO05D007295 3.2e-37 159.1 100 68.0
Sed0025931 Sechium edule HOM05D005893 ORTHO05D007295 3.2e-37 159.1 182 48.4
AUR62014260 Chenopodium quinoa HOM05D005893 ORTHO05D007295 5.5e-37 158.3 149 53.0
A09p47740 Brassica napus HOM05D005893 ORTHO05D007295 7.2e-37 157.9 166 48.8
Lj5g0004254 Lotus japonicus HOM05D005893 ORTHO05D007295 7.2e-37 157.9 133 57.9
Lj5g0008044 Lotus japonicus HOM05D005893 ORTHO05D007295 7.2e-37 157.9 133 57.9
Lj5g0026776 Lotus japonicus HOM05D005893 ORTHO05D007295 7.2e-37 157.9 133 57.9
TPR.G1908 Trifolium pratense HOM05D005893 ORTHO05D007295 7.2e-37 157.9 159 53.5
BraA09t40232Z Brassica rapa HOM05D005893 ORTHO05D007295 9.4e-37 157.5 167 48.5
BolC8t50606H Brassica oleracea HOM05D005893 ORTHO05D007295 1.2e-36 157.1 167 48.5
CARHR164770 Cardamine hirsuta HOM05D005893 ORTHO05D007295 1.2e-36 157.1 184 47.3
Carub.0005s2142 Capsella rubella HOM05D005893 ORTHO05D007295 1.6e-36 156.8 188 47.9
CANSAT56G0338 Cannabis sativa HOM05D005893 ORTHO05D007295 2.1e-36 156.4 119 62.2
Aa31sc66G40 Aethionema arabicum HOM05D005893 ORTHO05D007295 2.7e-36 156.0 123 62.6
BcaC07g39781 Brassica carinata HOM05D005893 ORTHO05D007295 3.6e-36 155.6 167 47.9
C08p29970 Brassica napus HOM05D005893 ORTHO05D007295 3.6e-36 155.6 167 47.9
HPP92_025345 Vanilla planifolia HOM05D005893 ORTHO05D007295 4.7e-36 155.2 176 47.2
AT3G54826 Arabidopsis thaliana HOM05D005893 ORTHO05D007295 1.0e-35 154.1 182 47.8
BcaB01g00158 Brassica carinata HOM05D005893 ORTHO05D007295 1.0e-35 154.1 192 45.8
Peaxi162Scf00431g00001 Petunia axillaris HOM05D005893 ORTHO05D007295 1.0e-35 154.1 143 53.8
EL10Ac6g14183 Beta vulgaris HOM05D005893 ORTHO05D007295 1.4e-35 153.7 111 64.0
AL5G35910 Arabidopsis lyrata HOM05D005893 ORTHO05D007295 1.8e-35 153.3 187 47.1
AUR62038482 Chenopodium quinoa HOM05D005893 ORTHO05D007295 1.8e-35 153.3 128 58.6
EL10Ac6g14385 Beta vulgaris HOM05D005893 ORTHO05D007295 2.3e-35 152.9 111 64.0
Thhalv10010741m.g Eutrema salsugineum HOM05D005893 ORTHO05D007295 3.0e-35 152.5 175 46.9
BcaB02g07716 Brassica carinata HOM05D005893 ORTHO05D007295 5.2e-35 151.8 191 46.6
SEGI_03670 Sequoiadendron giganteum HOM05D005893 ORTHO05D007295 5.2e-35 151.8 112 65.2
BcaC08g44701 Brassica carinata HOM05D005893 ORTHO05D007295 6.8e-35 151.4 125 56.8
C06p22370 Brassica napus HOM05D005893 ORTHO05D007295 6.8e-35 151.4 125 56.8
Os02g0819700 Oryza sativa ssp. japonica HOM05D005893 ORTHO05D007295 6.8e-35 151.4 128 56.2
A07p22290 Brassica napus HOM05D005893 ORTHO05D007295 8.8e-35 151.0 125 57.6
Hma1.2p1_1458F.1_g284770 Hydrangea macrophylla HOM05D005893 ORTHO05D007295 8.8e-35 151.0 81 81.5
Medtr1g094720 Medicago truncatula HOM05D005893 ORTHO05D007295 8.8e-35 151.0 109 63.3
TWI15G0972 Tripterygium wilfordii HOM05D005893 ORTHO05D007295 8.8e-35 151.0 170 49.4
BraA07t29907Z Brassica rapa HOM05D005893 ORTHO05D007295 1.2e-34 150.6 125 56.8
Sp5g07600 Schrenkiella parvula HOM05D005893 ORTHO05D007295 1.2e-34 150.6 161 48.4
MD01G1105600 Malus domestica HOM05D005893 ORTHO05D007295 2.0e-34 149.8 187 46.5
Ah.01g004770 Amaranthus hybridus HOM05D005893 ORTHO05D007295 5.7e-34 148.3 149 51.7
Aqoxy1G01187 Aquilegia oxysepala HOM05D005893 ORTHO05D007295 5.7e-34 148.3 95 68.4
MD07G1171800 Malus domestica HOM05D005893 ORTHO05D007295 1.7e-33 146.7 106 62.3
Zm00001eb259110 Zea mays HOM05D005893 ORTHO05D007295 8.3e-33 144.4 185 47.6
FvH4_7g19000 Fragaria vesca HOM05D005893 ORTHO05D007295 1.4e-32 143.7 108 61.1
FAN06G1961 Fragaria x ananassa HOM05D005893 ORTHO05D007295 1.4e-32 143.7 108 61.1
FAN06G4511 Fragaria x ananassa HOM05D005893 ORTHO05D007295 1.4e-32 143.7 108 61.1
FAN03G3224 Fragaria x ananassa HOM05D005893 ORTHO05D007295 2.4e-32 142.9 108 62.0
Solyc05g053250.4 Solanum lycopersicum HOM05D005893 ORTHO05D007295 2.4e-32 142.9 175 46.9
FAN10G0987 Fragaria x ananassa HOM05D005893 ORTHO05D007295 3.1e-32 142.5 108 61.1
Lsat_1_v5_gn_8_20480 Lactuca sativa HOM05D005893 ORTHO05D007295 7.0e-32 141.4 181 44.8
FAN01G0197 Fragaria x ananassa HOM05D005893 ORTHO05D007295 9.1e-32 141.0 108 61.1
ECA233G2346 Erigeron canadensis HOM05D005893 ORTHO05D007295 4.5e-31 138.7 176 44.9
GSVIVG01016242001 Vitis vinifera HOM05D003292 ORTHO05D004237 2.9e-30 136.0 159 45.3
HanXRQChr08g0218681 Helianthus annuus HOM05D005893 ORTHO05D007295 5.0e-30 135.2 183 43.7
vmacro07131 Vaccinium macrocarpon HOM05D000972 ORTHO05D001783 8.6e-30 134.4 119 59.7
RcHm_v2.0_Chr1g0362931 Rosa chinensis HOM05D005893 ORTHO05D007295 2.5e-29 132.9 187 42.2
CDE01G0774 Ceratophyllum demersum HOM05D005893 ORTHO05D007295 7.2e-29 131.3 75 74.7
CBR_g38445 Chara braunii HOM05D005893 ORTHO05D007295 2.1e-28 129.8 157 42.0
Mapoly0143s0034 Marchantia polymorpha HOM05D005893 ORTHO05D007295 4.7e-28 128.6 178 43.8
Pp3c10_20870 Physcomitrium patens HOM05D005893 ORTHO05D007295 5.7e-26 121.7 89 60.7
AagrBONN_evm.TU.Sc2ySwM_228.2692 Anthoceros agrestis HOM05D005893 ORTHO05D007295 1.3e-25 120.6 87 57.5
SGA_v2.0_scaffold223G42811 Striga asiatica HOM05D005893 ORTHO05D007295 4.1e-24 115.5 192 39.6
FAN06G0522 Fragaria x ananassa HOM05D003292 ORTHO05D004237 1.0e-22 110.9 86 58.1
SMO364G0951 Selaginella moellendorffii HOM05D005893 ORTHO05D007295 5.6e-21 105.1 70 65.7
SGA_v2.0_scaffold51G18702 Striga asiatica HOM05D005893 ORTHO05D007295 9.5e-21 104.4 165 43.0
MBI05_g31456_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 2.1e-20 103.2 92 54.3
MBI05_g14981_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 1.0e-19 100.9 137 46.0
MCO14G392 Micromonas commoda HOM05D005893 ORTHO05D007295 4.4e-18 95.5 122 41.0
SGA_v2.0_scaffold211G42109 Striga asiatica HOM05D005893 ORTHO05D007295 4.9e-17 92.0 182 35.2
MBI05_g14980_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 1.0e-14 84.3 137 42.3
Cre07.g334851 Chlamydomonas reinhardtii HOM05D005893 ORTHO05D007295 5.0e-14 82.0 160 33.8
MBI08_g29407_MAGBIO Magnolia biondii HOM05D002127 ORTHO05D007295 9.5e-13 77.8 82 52.4
Peaxi162Scf00066g01616 Petunia axillaris HOM05D005893 ORTHO05D007295 9.5e-13 77.8 80 50.0
MBI04_g06289_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 6.8e-11 71.6 109 43.1
PRCOL_00001193 Prasinoderma coloniale HOM05D001599 ORTHO05D003184 8.9e-11 71.2 66 47.0
Mapoly0032s0026 Marchantia polymorpha HOM05D005893 ORTHO05D007295 2.6e-10 69.7 194 32.0
MBI19_g05599_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 4.4e-10 68.9 82 48.8
MBI05_g31458_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 1.1e-08 64.3 78 47.4
Rhsim05G0120600 Rhododendron simsii HOM05D005893 ORTHO05D007295 1.6e-07 60.5 41 65.9


User provided reference genes

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