Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_46.g18303 Utricularia gibba HOM05D005630 ORTHO05D006979 2.2e-74 282.3 154 100.0
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 8.0e-61 237.3 147 87.1
unitig_48.g30288 Utricularia gibba HOM05D005630 ORTHO05D006979 2.9e-50 202.2 132 84.1
MSTRG.19630 Avicennia marina HOM05D005630 ORTHO05D006979 8.3e-50 200.7 121 80.2
Lsat_1_v5_gn_5_90640 Lactuca sativa HOM05D005630 ORTHO05D006979 7.8e-48 194.1 121 73.6
Sopen02g029090 Solanum pennellii HOM05D005630 ORTHO05D006979 7.8e-48 194.1 121 75.2
CSS0013521 Camellia sinensis var. sinensis HOM05D005630 ORTHO05D006979 3.9e-47 191.8 126 71.4
Migut.J01281 Erythranthe guttata HOM05D005630 ORTHO05D006979 5.0e-47 191.4 119 75.6
Solyc02g084380.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 8.6e-47 190.7 121 73.6
HanXRQChr10g0314501 Helianthus annuus HOM05D005630 ORTHO05D006979 1.1e-46 190.3 121 72.7
Hma1.2p1_1164F.1_g262820 Hydrangea macrophylla HOM05D005630 ORTHO05D006979 1.5e-46 189.9 121 74.4
Nn8g40117 Nelumbo nucifera HOM05D005630 ORTHO05D006979 7.3e-46 187.6 126 70.6
Nitab4.5_0000914g0010 Nicotiana tabacum HOM05D005630 ORTHO05D006979 7.3e-46 187.6 121 71.1
Peaxi162Scf00083g01117 Petunia axillaris HOM05D005630 ORTHO05D006979 1.2e-45 186.8 121 71.1
PGSC0003DMG400023408 Solanum tuberosum HOM05D005630 ORTHO05D006979 1.6e-45 186.4 122 73.0
CAN.G1505.19 Capsicum annuum HOM05D005630 ORTHO05D006979 2.8e-45 185.7 121 71.9
Actinidia03956 Actinidia chinensis HOM05D005630 ORTHO05D006979 3.6e-45 185.3 121 73.6
Nitab4.5_0003965g0050 Nicotiana tabacum HOM05D005630 ORTHO05D006979 4.7e-45 184.9 121 69.4
Solyc05g054990.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 1.1e-44 183.7 120 72.5
Sopen05g033450 Solanum pennellii HOM05D005630 ORTHO05D006979 1.1e-44 183.7 120 72.5
Oeu028785.1 Olea europaea HOM05D005630 ORTHO05D006979 1.4e-44 183.3 121 68.6
CiPaw.04G061600 Carya illinoinensis HOM05D005630 ORTHO05D006979 2.3e-44 182.6 122 69.7
Rhsim03G0057400 Rhododendron simsii HOM05D005630 ORTHO05D006979 6.8e-44 181.0 118 71.2
Nitab4.5_0002880g0080 Nicotiana tabacum HOM05D005630 ORTHO05D006979 8.9e-44 180.6 121 68.6
Actinidia37787 Actinidia chinensis HOM05D005630 ORTHO05D006979 1.2e-43 180.3 115 73.0
Nitab4.5_0005975g0020 Nicotiana tabacum HOM05D005630 ORTHO05D006979 1.2e-43 180.3 119 70.6
TWI34G2008 Tripterygium wilfordii HOM05D005630 ORTHO05D006979 1.2e-43 180.3 122 69.7
vmacro07529 Vaccinium macrocarpon HOM05D005630 ORTHO05D006979 1.5e-43 179.9 122 70.5
Cc06_g16720 Coffea canephora HOM05D005630 ORTHO05D006979 5.8e-43 177.9 121 71.1
SalBow1G1736 Salvia bowleyana HOM05D005630 ORTHO05D006979 7.5e-43 177.6 126 65.9
CAN.G1465.11 Capsicum annuum HOM05D005630 ORTHO05D006979 9.8e-43 177.2 119 68.9
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 9.8e-43 177.2 122 68.0
Atru.chr7.200 Acer truncatum HOM05D005630 ORTHO05D006979 1.7e-42 176.4 126 65.9
CANSAT11G0524 Cannabis sativa HOM05D005630 ORTHO05D006979 1.7e-42 176.4 122 67.2
Haze_19305 Corylus avellana HOM05D005630 ORTHO05D006979 3.7e-42 175.3 122 69.7
Prupe.7G253200 Prunus persica HOM05D005630 ORTHO05D006979 3.7e-42 175.3 122 68.0
Sed0022514 Sechium edule HOM05D005630 ORTHO05D006979 4.9e-42 174.9 120 68.3
COL.COLO4_35448 Corchorus olitorius HOM05D000321 ORTHO05D000204 6.4e-42 174.5 122 66.4
MD02G1012200 Malus domestica HOM05D005630 ORTHO05D006979 6.4e-42 174.5 122 67.2
SGA_v2.0_scaffold336G49163 Striga asiatica HOM05D005630 ORTHO05D006979 6.4e-42 174.5 113 69.9
Prupe.3G048400 Prunus persica HOM05D005630 ORTHO05D006979 8.3e-42 174.1 122 66.4
QL02p091555 Quercus lobata HOM05D005630 ORTHO05D006979 8.3e-42 174.1 122 67.2
Cfa020874 Carpinus fangiana HOM05D005630 ORTHO05D006979 1.1e-41 173.7 122 67.2
ClCG10G005100 Citrullus lanatus HOM05D005630 ORTHO05D006979 1.1e-41 173.7 118 68.6
TAR383G0582 Trochodendron aralioides HOM05D005630 ORTHO05D006979 1.1e-41 173.7 122 66.4
Duzib128G0941 Durio zibethinus HOM05D005630 ORTHO05D006979 1.6e-40 169.9 122 64.8
PGR142G4039 Punica granatum HOM05D005630 ORTHO05D006979 1.6e-40 169.9 122 63.1
RcHm_v2.0_Chr2g0086501 Rosa chinensis HOM05D005630 ORTHO05D006979 1.6e-40 169.9 122 63.9
Potri.018G113200 Populus trichocarpa HOM05D005630 ORTHO05D006979 2.1e-40 169.5 112 67.9
MD15G1158000 Malus domestica HOM05D005630 ORTHO05D006979 3.5e-40 168.7 127 64.6
FAN26G1041 Fragaria x ananassa HOM05D005630 ORTHO05D006979 6.0e-40 167.9 122 61.5
Gohir.A05G280400 Gossypium hirsutum HOM05D005630 ORTHO05D006979 6.0e-40 167.9 122 64.8
Sc08g0004950 Simmondsia chinensis HOM05D005630 ORTHO05D006979 6.0e-40 167.9 122 62.3
Gohir.D05G282200 Gossypium hirsutum HOM05D005630 ORTHO05D006979 7.8e-40 167.5 122 64.8
Gorai.009G295600 Gossypium raimondii HOM05D005630 ORTHO05D006979 7.8e-40 167.5 122 64.8
Ciclev10009802m.g Citrus clementina HOM05D005630 ORTHO05D006979 1.7e-39 166.4 122 64.8
FAN28G1107 Fragaria x ananassa HOM05D005630 ORTHO05D006979 2.3e-39 166.0 122 60.7
Manes.03G015700 Manihot esculenta HOM05D005630 ORTHO05D006979 2.3e-39 166.0 102 73.5
BcaC05g28577 Brassica carinata HOM05D005630 ORTHO05D006979 3.9e-39 165.2 108 69.4
A05p30870 Brassica napus HOM05D005630 ORTHO05D006979 3.9e-39 165.2 108 69.4
C05p46800 Brassica napus HOM05D005630 ORTHO05D006979 3.9e-39 165.2 108 69.4
BolC5t33410H Brassica oleracea HOM05D005630 ORTHO05D006979 3.9e-39 165.2 108 69.4
BraA05t21929Z Brassica rapa HOM05D005630 ORTHO05D006979 3.9e-39 165.2 108 69.4
FvH4_1g01540 Fragaria vesca HOM05D005630 ORTHO05D006979 3.9e-39 165.2 122 60.7
Sp3g16800 Schrenkiella parvula HOM05D005630 ORTHO05D006979 3.9e-39 165.2 130 60.8
BcaB06g25926 Brassica carinata HOM05D005630 ORTHO05D006979 5.1e-39 164.9 120 62.5
Thhalv10021733m.g Eutrema salsugineum HOM05D005630 ORTHO05D006979 8.6e-39 164.1 114 65.8
AL3G32110 Arabidopsis lyrata HOM05D005630 ORTHO05D006979 1.5e-38 163.3 102 70.6
AT3G18760 Arabidopsis thaliana HOM05D005630 ORTHO05D006979 1.5e-38 163.3 102 70.6
MELO3C014176.2 Cucumis melo HOM05D005630 ORTHO05D006979 1.5e-38 163.3 108 69.4
Eucgr.H01921 Eucalyptus grandis HOM05D005630 ORTHO05D006979 1.5e-38 163.3 122 60.7
Eucgr.H01228 Eucalyptus grandis HOM05D005630 ORTHO05D006979 1.9e-38 162.9 122 60.7
EL10Ac4g09637 Beta vulgaris HOM05D005630 ORTHO05D006979 2.5e-38 162.5 122 62.3
CsaV3_3G004770 Cucumis sativus L. HOM05D005630 ORTHO05D006979 2.5e-38 162.5 116 68.1
DCAR_019353 Daucus carota HOM05D000452 ORTHO05D000647 2.5e-38 162.5 104 69.2
THA.LOC104826572 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 2.5e-38 162.5 109 67.0
Aa31LG8G5570 Aethionema arabicum HOM05D005630 ORTHO05D006979 3.3e-38 162.2 123 60.2
GSVIVG01001041001 Vitis vinifera HOM05D005630 ORTHO05D006979 3.3e-38 162.2 116 65.5
Carub.0003s1855 Capsella rubella HOM05D005630 ORTHO05D006979 4.3e-38 161.8 126 61.9
PSO210G0346 Papaver somniferum HOM05D005630 ORTHO05D006979 4.3e-38 161.8 113 68.1
PSO210G6044 Papaver somniferum HOM05D005630 ORTHO05D006979 4.3e-38 161.8 113 68.1
BcaB04g19003 Brassica carinata HOM05D005630 ORTHO05D006979 5.6e-38 161.4 108 66.7
C03p49710 Brassica napus HOM05D005630 ORTHO05D006979 5.6e-38 161.4 108 66.7
CARHR094150 Cardamine hirsuta HOM05D005630 ORTHO05D006979 5.6e-38 161.4 102 69.6
Lj3g0020108 Lotus japonicus HOM05D005630 ORTHO05D006979 9.5e-38 160.6 108 66.7
Lalb_Chr01g0020901 Lupinus albus HOM05D005630 ORTHO05D006979 9.5e-38 160.6 121 65.3
Ca_08945_v3 Cicer arietinum L. HOM05D005630 ORTHO05D006979 3.6e-37 158.7 118 62.7
Lj2g0025219 Lotus japonicus HOM05D005630 ORTHO05D006979 3.6e-37 158.7 118 61.9
TPR.G31501 Trifolium pratense HOM05D005630 ORTHO05D006979 3.6e-37 158.7 120 61.7
VMungo0464G1149 Vigna mungo HOM05D005630 ORTHO05D006979 3.6e-37 158.7 123 61.8
BraA03t13240Z Brassica rapa HOM05D005630 ORTHO05D006979 4.7e-37 158.3 108 64.8
Glyma.01G008800 Glycine max HOM05D005630 ORTHO05D006979 4.7e-37 158.3 108 65.7
BolC3t17269H Brassica oleracea HOM05D005630 ORTHO05D006979 6.2e-37 157.9 108 65.7
Glyma.16G077600 Glycine max HOM05D005630 ORTHO05D006979 8.1e-37 157.5 126 58.7
arahy.Tifrunner.gnm1.ann1.N9H741 Arachis hypogaea HOM05D005630 ORTHO05D006979 1.1e-36 157.1 108 64.8
Medtr6g088605 Medicago truncatula HOM05D005630 ORTHO05D006979 1.4e-36 156.8 108 63.9
THA.LOC104815401 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 1.4e-36 156.8 122 59.8
TPR.G21379 Trifolium pratense HOM05D005630 ORTHO05D006979 1.4e-36 156.8 123 59.3
Medtr7g103190 Medicago truncatula HOM05D005630 ORTHO05D006979 2.3e-36 156.0 108 63.9
Os01g0220300 Oryza sativa ssp. japonica HOM05D005630 ORTHO05D006979 3.1e-36 155.6 119 60.5
Phvul.004G170400 Phaseolus vulgaris HOM05D005630 ORTHO05D006979 3.1e-36 155.6 123 60.2
Psat3g037680 Pisum sativum HOM05D005630 ORTHO05D006979 4.0e-36 155.2 108 63.0
HPP92_008634 Vanilla planifolia HOM05D005630 ORTHO05D006979 5.2e-36 154.8 122 59.0
Dinv41416 Davidia involucrata HOM05D005630 ORTHO05D006979 8.9e-36 154.1 102 68.6
VMungo0464G1592 Vigna mungo HOM05D005630 ORTHO05D006979 1.5e-35 153.3 123 60.2
Oeu040774.1 Olea europaea HOM05D005630 ORTHO05D006979 2.6e-35 152.5 164 50.6
FAN23G2038 Fragaria x ananassa HOM05D005630 ORTHO05D006979 9.9e-35 150.6 170 45.9
Zm00001eb119770 Zea mays HOM05D005630 ORTHO05D006979 9.9e-35 150.6 124 60.5
Psat5g026240 Pisum sativum HOM05D005630 ORTHO05D006979 2.2e-34 149.4 98 66.3
A03p40820 Brassica napus HOM05D005630 ORTHO05D006979 1.1e-33 147.1 108 63.0
MBI07_g35858_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 9.2e-33 144.1 87 77.0
Thecc.10G171800 Theobroma cacao HOM05D005630 ORTHO05D006979 1.6e-32 143.3 96 66.7
Ah.01g003710 Amaranthus hybridus HOM05D005630 ORTHO05D006979 9.6e-30 134.0 89 68.5
FAN19G2317 Fragaria x ananassa HOM05D005630 ORTHO05D006979 2.1e-29 132.9 122 51.6
CDE02G3819 Ceratophyllum demersum HOM05D005630 ORTHO05D006979 5.2e-28 128.3 84 67.9
AagrBONN_evm.TU.Sc2ySwM_117.2919 Anthoceros agrestis HOM05D005630 ORTHO05D006979 4.9e-26 121.7 100 58.0
Eucgr.B02192 Eucalyptus grandis HOM05D005630 ORTHO05D006979 3.2e-25 119.0 86 61.6
Pp3c3_21570 Physcomitrium patens HOM05D005630 ORTHO05D006979 4.2e-25 118.6 97 52.6
Mapoly0179s0002 Marchantia polymorpha HOM05D005630 ORTHO05D006979 2.3e-23 112.8 97 53.6
SMO146G0230 Selaginella moellendorffii HOM05D005630 ORTHO05D006979 4.3e-22 108.6 122 46.7
Lj7A451T27 Lonicera japonica HOM05D005630 ORTHO05D006979 3.6e-21 105.5 61 75.4
SGA_v2.0_scaffold416G51224 Striga asiatica HOM05D005630 ORTHO05D006979 1.5e-19 100.1 61 72.1
CBR_g37184 Chara braunii HOM05D005630 ORTHO05D006979 2.0e-19 99.8 98 49.0
AUR62001080 Chenopodium quinoa HOM05D005630 ORTHO05D006979 2.4e-17 92.8 61 65.6
AUR62004880 Chenopodium quinoa HOM05D005630 ORTHO05D006979 1.0e-15 87.4 61 62.3
SEGI_16423 Sequoiadendron giganteum HOM05D005630 ORTHO05D006979 1.1e-14 84.0 66 59.1
Nn2g11495 Nelumbo nucifera HOM05D005630 ORTHO05D006979 7.3e-14 81.3 62 64.5
MD16G1239100 Malus domestica HOM05D005630 ORTHO05D006979 4.8e-13 78.6 57 61.4
ATR1096G006 Amborella trichopoda HOM05D005630 ORTHO05D006979 1.8e-12 76.6 52 67.3
TPR.G10852 Trifolium pratense HOM05D005630 ORTHO05D006979 9.0e-12 74.3 49 67.3
Cpa.g.sc20.36 Carica papaya HOM05D005630 ORTHO05D006979 1.2e-11 73.9 82 46.3
SalBow1G6627 Salvia bowleyana HOM05D005630 ORTHO05D006979 1.2e-11 73.9 60 58.3
Eucgr.L01073 Eucalyptus grandis HOM05D005630 ORTHO05D006979 9.9e-11 70.9 62 51.6
MBI07_g26347_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 1.7e-10 70.1 62 59.7
AUR62039003 Chenopodium quinoa HOM05D005630 ORTHO05D006979 5.5e-09 65.1 71 40.8
MCO04G088 Micromonas commoda HOM05D005630 ORTHO05D006979 3.5e-08 62.4 101 27.7
Cre12.g558000 Chlamydomonas reinhardtii HOM05D005630 ORTHO05D006979 8.7e-07 57.8 96 32.3
Medtr5g037160 Medicago truncatula HOM05D005630 ORTHO05D000782 7.4e-06 54.7 66 42.4


User provided reference genes

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