Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_46.g18229 Utricularia gibba HOM05D007132 ORTHO05D009120 5.9e-205 717.2 344 100.0
SalBow8G0736 Salvia bowleyana HOM05D007132 ORTHO05D009120 2.1e-133 479.6 333 68.8
MSTRG.1761 Avicennia marina HOM05D007132 ORTHO05D009120 1.9e-126 456.4 356 63.8
Oeu046789.1 Olea europaea HOM05D007132 ORTHO05D009120 1.0e-124 450.7 342 63.7
SGA_v2.0_scaffold111G31350 Striga asiatica HOM05D007132 ORTHO05D009120 1.6e-122 443.4 370 60.0
vmacro00083 Vaccinium macrocarpon HOM05D007132 ORTHO05D009120 2.5e-115 419.5 345 60.9
Manes.S095221 Manihot esculenta HOM05D007132 ORTHO05D009120 4.8e-114 415.2 329 61.7
Solyc08g075510.4 Solanum lycopersicum HOM05D007132 ORTHO05D009120 1.1e-113 414.1 357 58.0
Sopen08g024160 Solanum pennellii HOM05D007132 ORTHO05D009120 2.4e-113 412.9 357 58.0
Thecc.09G252800 Theobroma cacao HOM05D007132 ORTHO05D009120 3.4e-112 409.1 343 59.8
Potri.009G025400 Populus trichocarpa HOM05D007132 ORTHO05D009120 1.7e-111 406.8 329 61.7
CAN.G1026.1 Capsicum annuum HOM05D007132 ORTHO05D009120 2.9e-111 406.0 331 58.3
Actinidia32785 Actinidia chinensis HOM05D007132 ORTHO05D009120 5.0e-111 405.2 365 55.6
PGSC0003DMG400001970 Solanum tuberosum HOM05D007132 ORTHO05D009120 1.1e-110 404.1 329 59.3
Atru.chr8.2638 Acer truncatum HOM05D007132 ORTHO05D009120 2.5e-110 402.9 347 58.5
CiPaw.11G075400 Carya illinoinensis HOM05D007132 ORTHO05D009120 5.5e-110 401.7 328 58.5
Lsat_1_v5_gn_6_15181 Lactuca sativa HOM05D007132 ORTHO05D009120 1.2e-109 400.6 336 56.8
Medtr5g025190 Medicago truncatula HOM05D007132 ORTHO05D009120 1.6e-109 400.2 354 55.6
VMungo1215G2638 Vigna mungo HOM05D007132 ORTHO05D009120 1.6e-109 400.2 337 58.2
Cfa012869 Carpinus fangiana HOM05D007132 ORTHO05D009120 3.6e-109 399.1 331 60.1
Nitab4.5_0004157g0010 Nicotiana tabacum HOM05D007132 ORTHO05D009120 6.1e-109 398.3 329 59.6
Peaxi162Scf00053g00715 Petunia axillaris HOM05D007132 ORTHO05D009120 6.1e-109 398.3 313 59.1
PGR042G0795 Punica granatum HOM05D007132 ORTHO05D009120 7.9e-109 397.9 329 59.3
Sabra09G0016800 Salix brachista HOM05D007132 ORTHO05D009120 7.9e-109 397.9 341 59.2
HanXRQChr12g0382251 Helianthus annuus HOM05D007132 ORTHO05D009120 1.4e-108 397.1 353 54.4
EL10Ac2g04081 Beta vulgaris HOM05D007132 ORTHO05D009120 1.8e-108 396.7 332 58.4
Psat2g145880 Pisum sativum HOM05D007132 ORTHO05D009120 1.8e-108 396.7 327 58.7
DCAR_028364 Daucus carota HOM05D007132 ORTHO05D009120 2.3e-108 396.4 329 58.7
Lj2g0003748 Lotus japonicus HOM05D007132 ORTHO05D009120 2.3e-108 396.4 327 59.0
COL.COLO4_33243 Corchorus olitorius HOM05D007132 ORTHO05D009120 5.1e-108 395.2 327 59.3
Potri.001G233200 Populus trichocarpa HOM05D007132 ORTHO05D009120 5.1e-108 395.2 329 60.5
Ciclev10031829m.g Citrus clementina HOM05D007132 ORTHO05D009120 1.1e-107 394.0 333 59.2
Duzib168G0014 Durio zibethinus HOM05D007132 ORTHO05D009120 1.1e-107 394.0 327 59.3
TPR.G5247 Trifolium pratense HOM05D007132 ORTHO05D009120 2.0e-107 393.3 327 57.8
Nn1g09371 Nelumbo nucifera HOM05D007132 ORTHO05D009120 2.5e-107 392.9 373 53.9
Cc08_g05480 Coffea canephora HOM05D007132 ORTHO05D009120 3.3e-107 392.5 338 58.3
CANSAT11G0857 Cannabis sativa HOM05D007132 ORTHO05D009120 4.3e-107 392.1 334 57.8
MBI04_g06282_MAGBIO Magnolia biondii HOM05D007132 ORTHO05D009120 2.2e-106 389.8 341 58.1
Thhalv10002595m.g Eutrema salsugineum HOM05D007132 ORTHO05D009120 2.8e-106 389.4 333 58.6
Glyma.11G089600 Glycine max HOM05D007132 ORTHO05D009120 3.7e-106 389.0 329 58.7
TWI75G0244 Tripterygium wilfordii HOM05D007132 ORTHO05D009120 4.8e-106 388.7 348 56.3
AUR62009339 Chenopodium quinoa HOM05D007132 ORTHO05D009120 6.3e-106 388.3 329 57.1
Sp2g03890 Schrenkiella parvula HOM05D007132 ORTHO05D009120 1.1e-105 387.5 338 56.8
MD05G1209900 Malus domestica HOM05D007132 ORTHO05D009120 1.4e-105 387.1 326 57.1
Cpa.g.sc90.24 Carica papaya HOM05D004914 ORTHO05D006512 1.8e-105 386.7 340 56.8
CARHR154210 Cardamine hirsuta HOM05D007132 ORTHO05D009120 2.4e-105 386.3 339 56.0
Nitab4.5_0000030g0380 Nicotiana tabacum HOM05D007132 ORTHO05D009120 2.4e-105 386.3 329 58.7
CSS0020867 Camellia sinensis var. sinensis HOM05D007132 ORTHO05D009120 5.3e-105 385.2 350 55.7
BcaB01g01051 Brassica carinata HOM05D007132 ORTHO05D009120 9.1e-105 384.4 335 57.0
BolC3t19289H Brassica oleracea HOM05D007132 ORTHO05D009120 9.1e-105 384.4 333 57.7
C03p70370 Brassica napus HOM05D007132 ORTHO05D009120 1.2e-104 384.0 333 57.7
Eucgr.E01138 Eucalyptus grandis HOM05D007132 ORTHO05D009120 1.2e-104 384.0 332 56.6
Lj8A344T21 Lonicera japonica HOM05D007132 ORTHO05D009120 1.2e-104 384.0 417 49.6
A06p21200 Brassica napus HOM05D007132 ORTHO05D009120 2.6e-104 382.9 333 57.4
CDE02G3577 Ceratophyllum demersum HOM05D007132 ORTHO05D009120 3.4e-104 382.5 330 56.7
Gohir.D09G105701 Gossypium hirsutum HOM05D007132 ORTHO05D009120 3.4e-104 382.5 334 57.8
Gorai.006G123100 Gossypium raimondii HOM05D007132 ORTHO05D009120 3.4e-104 382.5 334 57.8
Gohir.A09G109100 Gossypium hirsutum HOM05D007132 ORTHO05D009120 7.7e-104 381.3 334 57.8
Lj8C1T2 Lonicera japonica HOM05D007132 ORTHO05D009120 7.7e-104 381.3 418 49.0
arahy.Tifrunner.gnm1.ann1.63YFX7 Arachis hypogaea HOM05D007132 ORTHO05D009120 2.9e-103 379.4 336 56.5
arahy.Tifrunner.gnm1.ann1.WE0KUF Arachis hypogaea HOM05D007132 ORTHO05D009120 2.9e-103 379.4 336 56.5
BraA06t25207Z Brassica rapa HOM05D007132 ORTHO05D009120 3.8e-103 379.0 328 57.3
QL12p004376 Quercus lobata HOM05D007132 ORTHO05D009120 5.0e-103 378.6 403 50.9
RcHm_v2.0_Chr5g0027441 Rosa chinensis HOM05D007132 ORTHO05D009120 6.5e-103 378.3 348 54.6
FvH4_3g16420 Fragaria vesca HOM05D007132 ORTHO05D009120 1.1e-102 377.5 334 56.0
Aa31LG9G15710 Aethionema arabicum HOM05D007132 ORTHO05D009120 2.5e-102 376.3 335 56.1
AL5G24560 Arabidopsis lyrata HOM05D007132 ORTHO05D009120 9.4e-102 374.4 333 56.8
PSO541G5430 Papaver somniferum HOM05D007132 ORTHO05D009120 7.9e-101 371.3 357 53.5
FAN25G2365 Fragaria x ananassa HOM05D007132 ORTHO05D009120 1.0e-100 370.9 350 53.7
Carub.0005s1173 Capsella rubella HOM05D007132 ORTHO05D009120 2.3e-100 369.8 332 56.3
Aqoxy3G02733 Aquilegia oxysepala HOM05D007132 ORTHO05D009120 3.0e-100 369.4 335 54.0
ATR0568G089 Amborella trichopoda HOM05D007132 ORTHO05D009120 6.7e-100 368.2 335 54.6
AT3G45880 Arabidopsis thaliana HOM05D007132 ORTHO05D009120 1.1e-99 367.5 333 56.2
FAN11G4000 Fragaria x ananassa HOM05D007132 ORTHO05D009120 2.0e-99 366.7 350 53.1
Sc01g0005800 Simmondsia chinensis HOM05D007132 ORTHO05D009120 3.1e-97 359.4 314 54.8
AUR62023023 Chenopodium quinoa HOM05D007132 ORTHO05D009120 3.0e-92 342.8 332 51.8
AUR62043353 Chenopodium quinoa HOM05D007132 ORTHO05D009120 3.0e-92 342.8 332 51.8
THA.LOC104798521 Tarenaya hassleriana HOM05D007132 ORTHO05D009120 2.6e-91 339.7 352 50.9
SEGI_38459 Sequoiadendron giganteum HOM05D007132 ORTHO05D009120 4.4e-91 339.0 341 50.7
BcaC01g01945 Brassica carinata HOM05D007132 ORTHO05D009120 5.7e-91 338.6 309 55.0
Hund11034 Selenicereus undatus HOM05D007132 ORTHO05D009120 9.1e-89 331.3 289 55.7
Os09g0483600 Oryza sativa ssp. japonica HOM05D007132 ORTHO05D009120 5.0e-87 325.5 338 48.5
Zm00001eb316510 Zea mays HOM05D007132 ORTHO05D009120 8.5e-87 324.7 338 50.0
ECA233G5682 Erigeron canadensis HOM05D003740 ORTHO05D004611 9.4e-86 321.2 285 55.4
Prupe.4G147600 Prunus persica HOM05D007132 ORTHO05D009120 3.6e-85 319.3 284 54.9
Pp3c2_13200 Physcomitrium patens HOM05D007132 ORTHO05D009120 4.7e-85 318.9 351 47.9
Haze_08441 Corylus avellana HOM05D007132 ORTHO05D009120 2.3e-84 316.6 287 56.1
Phvul.002G120400 Phaseolus vulgaris HOM05D007132 ORTHO05D009120 6.8e-84 315.1 282 55.3
Lalb_Chr05g0215041 Lupinus albus HOM05D007132 ORTHO05D009120 1.3e-79 300.8 287 53.3
Ah.10g035250 Amaranthus hybridus HOM05D001758 ORTHO05D005969 4.9e-74 282.3 291 49.5
SMO367G0267 Selaginella moellendorffii HOM05D007132 ORTHO05D009120 7.7e-72 275.0 347 43.5
Nitab4.5_0000898g0130 Nicotiana tabacum HOM05D007132 ORTHO05D009120 3.6e-69 266.2 276 50.4
PSO675G1526 Papaver somniferum HOM05D007132 ORTHO05D009120 1.7e-63 247.3 265 49.8
TAR629G3242 Trochodendron aralioides HOM05D007132 ORTHO05D009120 2.8e-53 213.4 183 56.3
MD10G1196200 Malus domestica HOM05D007132 ORTHO05D009120 8.1e-45 185.3 162 56.8
AagrBONN_evm.TU.Sc2ySwM_344.2529 Anthoceros agrestis HOM05D007132 ORTHO05D009120 1.1e-44 184.9 290 37.6
TAR629G3340 Trochodendron aralioides HOM05D007132 ORTHO05D009120 6.8e-44 182.2 127 66.9
MCO03G301 Micromonas commoda HOM05D007132 ORTHO05D009120 2.2e-42 177.2 326 34.7
GSVIVG01036861001 Vitis vinifera HOM05D007132 ORTHO05D009120 3.2e-41 173.3 125 64.0
Sp5g15660 Schrenkiella parvula HOM05D007132 ORTHO05D009120 9.2e-41 171.8 274 40.1
Cc02_g31510 Coffea canephora HOM05D007132 ORTHO05D009120 3.5e-40 169.9 151 56.3
Migut.E01364 Erythranthe guttata HOM05D007132 ORTHO05D009120 8.6e-39 165.2 107 73.8
Cfa022513 Carpinus fangiana HOM05D007132 ORTHO05D009120 2.6e-35 153.7 309 35.3
Rhsim11G0036100 Rhododendron simsii HOM05D007132 ORTHO05D009120 2.0e-27 127.5 80 72.5
PRCOL_00004459 Prasinoderma coloniale HOM05D007132 ORTHO05D009120 3.8e-26 123.2 295 30.8
Nitab4.5_0000480g0030 Nicotiana tabacum HOM05D007132 ORTHO05D009120 3.2e-17 93.6 80 56.2
Cre03.g175750 Chlamydomonas reinhardtii HOM05D007132 ORTHO05D009120 4.2e-17 93.2 243 27.6
Psat2g145800 Pisum sativum HOM05D007132 ORTHO05D009120 1.2e-16 91.7 44 90.9
Lalb_Chr05g0215031 Lupinus albus HOM05D007132 ORTHO05D009120 9.6e-14 82.0 42 85.7
Haze_08440 Corylus avellana HOM05D000433 ORTHO05D000443 1.3e-13 81.6 57 63.2
CDE11G0272 Ceratophyllum demersum HOM05D000435 ORTHO05D000430 1.8e-12 77.8 105 36.2
FAN13G1029 Fragaria x ananassa HOM05D007132 ORTHO05D009181 1.7e-10 71.2 177 31.1
FAN02G3822 Fragaria x ananassa HOM05D007132 ORTHO05D009120 7.1e-09 65.9 127 34.6
ATR0605G084 Amborella trichopoda HOM05D004419 ORTHO05D005480 9.3e-09 65.5 252 25.4
Medtr5g032230 Medicago truncatula HOM05D007132 ORTHO05D009120 1.8e-07 61.2 85 42.4
Rhsim11G0036200 Rhododendron simsii HOM05D007132 ORTHO05D009120 2.3e-07 60.8 39 66.7
ECA233G0260 Erigeron canadensis HOM05D004419 ORTHO05D005480 1.1e-06 58.5 273 23.8
Ciclev10015488m.g Citrus clementina HOM05D004419 ORTHO05D005480 1.5e-06 58.2 265 23.0
Migut.D00562 Erythranthe guttata HOM05D004419 ORTHO05D005480 1.9e-06 57.8 269 24.2
Ciclev10019332m.g Citrus clementina HOM05D004978 ORTHO05D005621 2.5e-06 57.4 333 24.0
Hma1.2p1_0143F.1_g064490 Hydrangea macrophylla HOM05D004419 ORTHO05D005480 2.5e-06 57.4 268 24.3
Sed0001509 Sechium edule HOM05D004419 ORTHO05D005480 3.3e-06 57.0 274 21.9
A03p09660 Brassica napus HOM05D004978 ORTHO05D005621 5.7e-06 56.2 142 28.9
BraA03t10282Z Brassica rapa HOM05D004978 ORTHO05D005621 5.7e-06 56.2 142 28.9
CsaV3_1G042600 Cucumis sativus L. HOM05D004419 ORTHO05D005480 7.4e-06 55.8 271 22.5
HanXRQChr02g0056491 Helianthus annuus HOM05D004419 ORTHO05D005480 7.4e-06 55.8 268 23.9


User provided reference genes

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