Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_46.g18101 Utricularia gibba HOM05D003910 ORTHO05D004622 7.9e-219 763.5 380 100.0
Solyc08g069030.4 Solanum lycopersicum HOM05D003910 ORTHO05D004622 2.9e-181 638.6 343 91.3
Nn4g23592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 1.5e-180 636.3 343 90.1
Dinv27301 Davidia involucrata HOM05D003910 ORTHO05D004622 3.3e-180 635.2 344 89.2
PGSC0003DMG400029545 Solanum tuberosum HOM05D003910 ORTHO05D004622 5.6e-180 634.4 343 90.1
CAN.G908.4 Capsicum annuum HOM05D003910 ORTHO05D004622 1.2e-179 633.3 342 90.4
Nitab4.5_0005516g0010 Nicotiana tabacum HOM05D003910 ORTHO05D004622 2.1e-179 632.5 336 92.3
PGR044G2730 Punica granatum HOM05D003910 ORTHO05D004622 2.8e-179 632.1 336 89.9
SGA_v2.0_scaffold52G18960 Striga asiatica HOM05D003910 ORTHO05D004622 4.7e-179 631.3 352 88.4
Nitab4.5_0000502g0120 Nicotiana tabacum HOM05D003910 ORTHO05D004622 1.8e-178 629.4 336 91.7
Sopen08g022680 Solanum pennellii HOM05D003910 ORTHO05D004622 5.2e-178 627.9 336 91.4
AL2G28910 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 6.8e-178 627.5 343 89.5
Cfa018581 Carpinus fangiana HOM05D003910 ORTHO05D004622 6.8e-178 627.5 342 88.6
Haze_17499 Corylus avellana HOM05D003910 ORTHO05D004622 6.8e-178 627.5 342 88.6
Sabra05G0135000 Salix brachista HOM05D003910 ORTHO05D004622 8.9e-178 627.1 343 89.2
PSO384G4520 Papaver somniferum HOM05D003910 ORTHO05D004622 1.2e-177 626.7 336 90.2
Aa31LG11G8660 Aethionema arabicum HOM05D003910 ORTHO05D004622 1.5e-177 626.3 344 88.1
PSO339G3693 Papaver somniferum HOM05D003910 ORTHO05D004622 4.4e-177 624.8 336 89.9
Prupe.1G494300 Prunus persica HOM05D003910 ORTHO05D004622 5.8e-177 624.4 336 91.1
DCAR_016682 Daucus carota HOM05D003910 ORTHO05D004622 7.5e-177 624.0 336 89.9
MSTRG.25378 Avicennia marina HOM05D003910 ORTHO05D004622 9.8e-177 623.6 336 89.9
AUR62014326 Chenopodium quinoa HOM05D003910 ORTHO05D004622 9.8e-177 623.6 336 90.2
AT1G69740 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 1.3e-176 623.2 343 88.6
Dinv07208 Davidia involucrata HOM05D003910 ORTHO05D004622 1.3e-176 623.2 342 88.6
COL.COLO4_24698 Corchorus olitorius HOM05D003910 ORTHO05D004622 1.7e-176 622.9 336 89.9
Medtr3g088610 Medicago truncatula HOM05D003910 ORTHO05D004622 1.7e-176 622.9 336 89.9
CiPaw.16G066200 Carya illinoinensis HOM05D003910 ORTHO05D004622 2.9e-176 622.1 343 87.8
CARHR062800 Cardamine hirsuta HOM05D003910 ORTHO05D004622 3.7e-176 621.7 338 89.3
Lj7A342T56 Lonicera japonica HOM05D003910 ORTHO05D004622 6.4e-176 620.9 335 90.1
Rhsim05G0148200 Rhododendron simsii HOM05D003910 ORTHO05D004622 6.4e-176 620.9 335 89.9
MD08G1161600 Malus domestica HOM05D003910 ORTHO05D004622 1.4e-175 619.8 337 89.0
THA.LOC104813147 Tarenaya hassleriana HOM05D003910 ORTHO05D004622 1.4e-175 619.8 338 88.2
AUR62019066 Chenopodium quinoa HOM05D003910 ORTHO05D004622 1.8e-175 619.4 336 89.9
HanXRQChr17g0559761 Helianthus annuus HOM05D003910 ORTHO05D004622 4.1e-175 618.2 335 88.7
ECA233G1142 Erigeron canadensis HOM05D003910 ORTHO05D004622 5.4e-175 617.8 334 89.2
MD15G1346700 Malus domestica HOM05D003910 ORTHO05D004622 5.4e-175 617.8 336 89.0
Thhalv10018595m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 7.0e-175 617.5 336 89.3
Oeu028562.1 Olea europaea HOM05D003910 ORTHO05D004622 7.0e-175 617.5 327 91.7
Thecc.08G127500 Theobroma cacao HOM05D003910 ORTHO05D004622 7.0e-175 617.5 336 88.7
Carub.0002s1641 Capsella rubella HOM05D003910 ORTHO05D004622 9.2e-175 617.1 336 89.6
Gohir.D05G237801 Gossypium hirsutum HOM05D003910 ORTHO05D004622 9.2e-175 617.1 338 88.5
Gorai.009G246200 Gossypium raimondii HOM05D003910 ORTHO05D004622 9.2e-175 617.1 338 88.5
Ah.15g093760 Amaranthus hybridus HOM05D003910 ORTHO05D004622 1.2e-174 616.7 361 84.5
BcaB03g14749 Brassica carinata HOM05D003910 ORTHO05D004622 1.6e-174 616.3 341 88.0
C06p43500 Brassica napus HOM05D003910 ORTHO05D004622 2.0e-174 615.9 342 87.4
BolC6t39425H Brassica oleracea HOM05D003910 ORTHO05D004622 2.0e-174 615.9 342 87.4
Duzib041G0414 Durio zibethinus HOM05D003910 ORTHO05D004622 2.0e-174 615.9 336 88.7
Cpa.g.sc64.96 Carica papaya HOM05D003910 ORTHO05D004622 2.7e-174 615.5 336 88.1
CANSAT25G1111 Cannabis sativa HOM05D003910 ORTHO05D004622 4.6e-174 614.8 335 89.0
CDE10G0179 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 6.0e-174 614.4 343 85.7
Sp5g24850 Schrenkiella parvula HOM05D003910 ORTHO05D004622 6.0e-174 614.4 340 87.9
BcaC08g46419 Brassica carinata HOM05D003910 ORTHO05D004622 7.8e-174 614.0 342 87.1
TAR629G0788 Trochodendron aralioides HOM05D003910 ORTHO05D004622 1.0e-173 613.6 327 90.5
Cc08_g06800 Coffea canephora HOM05D003910 ORTHO05D004622 1.3e-173 613.2 329 90.9
EL10Ac1g01030 Beta vulgaris HOM05D003910 ORTHO05D004622 2.3e-173 612.5 349 87.4
Psat5g087720 Pisum sativum HOM05D003910 ORTHO05D004622 2.3e-173 612.5 328 90.9
Migut.C01121 Erythranthe guttata HOM05D003910 ORTHO05D004622 3.0e-173 612.1 332 90.4
Gohir.A05G235500 Gossypium hirsutum HOM05D003910 ORTHO05D004622 3.9e-173 611.7 338 87.6
CSS0022256 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 8.6e-173 610.5 358 83.8
SalBow7G1186 Salvia bowleyana HOM05D003910 ORTHO05D004622 1.1e-172 610.1 367 82.8
Lj1g0017187 Lotus japonicus HOM05D003910 ORTHO05D004622 1.5e-172 609.8 327 91.4
VMungo1309G0189 Vigna mungo HOM05D003910 ORTHO05D004622 2.5e-172 609.0 325 91.7
A07p36130 Brassica napus HOM05D003910 ORTHO05D004622 4.3e-172 608.2 341 87.4
BraA07t31189Z Brassica rapa HOM05D003910 ORTHO05D004622 4.3e-172 608.2 336 87.8
Glyma.04G247700 Glycine max HOM05D003910 ORTHO05D004622 4.3e-172 608.2 327 90.5
Phvul.009G127100 Phaseolus vulgaris HOM05D003910 ORTHO05D004622 7.3e-172 607.4 327 90.2
Lsat_1_v5_gn_8_141520 Lactuca sativa HOM05D003910 ORTHO05D004622 9.5e-172 607.1 332 88.3
Eucgr.F03796 Eucalyptus grandis HOM05D003910 ORTHO05D004622 4.7e-171 604.7 318 92.5
Manes.18G078475 Manihot esculenta HOM05D003910 ORTHO05D004622 1.1e-170 603.6 319 91.8
Lalb_Chr11g0066041 Lupinus albus HOM05D003910 ORTHO05D004622 1.4e-170 603.2 327 90.2
MELO3C008086.2 Cucumis melo HOM05D003910 ORTHO05D004622 2.3e-170 602.4 317 91.8
CsaV3_2G033150 Cucumis sativus L. HOM05D003910 ORTHO05D004622 2.3e-170 602.4 317 91.8
Manes.02G164600 Manihot esculenta HOM05D003910 ORTHO05D004622 2.3e-170 602.4 323 90.4
ClCG11G008960 Citrullus lanatus HOM05D003910 ORTHO05D004622 5.2e-170 601.3 316 92.1
Hma1.2p1_0129F.1_g060300 Hydrangea macrophylla HOM05D003910 ORTHO05D004622 8.9e-170 600.5 361 83.7
QL09p034136 Quercus lobata HOM05D003910 ORTHO05D004622 1.2e-169 600.1 327 89.0
Potri.002G082300 Populus trichocarpa HOM05D003910 ORTHO05D004622 3.4e-169 598.6 325 89.2
TPR.G16047 Trifolium pratense HOM05D003910 ORTHO05D004622 4.4e-169 598.2 320 90.6
TWI60G1334 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 5.8e-169 597.8 320 89.7
Sabra02G0064500 Salix brachista HOM05D003910 ORTHO05D004622 7.5e-169 597.4 321 90.0
Sed0003239 Sechium edule HOM05D003910 ORTHO05D004622 7.5e-169 597.4 316 91.5
TWI32G0928 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 9.8e-169 597.0 320 89.4
GSVIVG01008851001 Vitis vinifera HOM05D003910 ORTHO05D004622 1.3e-168 596.7 319 90.3
Ca_16573_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 2.2e-168 595.9 320 90.0
Ca_29570_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 2.2e-168 595.9 320 90.0
Os06g0704600 Oryza sativa ssp. japonica HOM05D003910 ORTHO05D004622 6.4e-168 594.3 339 85.3
Ciclev10001195m.g Citrus clementina HOM05D003910 ORTHO05D004622 1.9e-167 592.8 328 87.2
FAN15G2864 Fragaria x ananassa HOM05D003910 ORTHO05D004622 2.4e-167 592.4 333 87.1
Lalb_Chr08g0241321 Lupinus albus HOM05D003910 ORTHO05D004622 3.2e-167 592.0 329 88.8
Zm00001eb227310 Zea mays HOM05D003910 ORTHO05D004622 7.0e-167 590.9 339 84.7
Atru.chr13.1495 Acer truncatum HOM05D003910 ORTHO05D004622 2.0e-166 589.3 346 84.1
Aqoxy3G03785 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 3.9e-165 585.1 318 89.0
AagrBONN_evm.TU.Sc2ySwM_117.3949 Anthoceros agrestis HOM05D003910 ORTHO05D004622 9.5e-164 580.5 347 81.8
FAN20G2211 Fragaria x ananassa HOM05D003910 ORTHO05D004622 9.5e-164 580.5 317 89.6
FAN27G3176 Fragaria x ananassa HOM05D003910 ORTHO05D004622 3.6e-163 578.6 317 89.3
ATR0691G248 Amborella trichopoda HOM05D003910 ORTHO05D004622 4.7e-163 578.2 338 82.2
FvH4_2g27170 Fragaria vesca HOM05D003910 ORTHO05D004622 8.1e-163 577.4 316 89.6
FAN24G0257 Fragaria x ananassa HOM05D003910 ORTHO05D004622 8.1e-163 577.4 316 89.6
RcHm_v2.0_Chr6g0296081 Rosa chinensis HOM05D003910 ORTHO05D004622 1.4e-162 576.6 317 88.6
MBI14_g21210_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 1.5e-161 573.2 314 87.9
HPP92_019462 Vanilla planifolia HOM05D003910 ORTHO05D004622 4.4e-161 571.6 339 82.6
SMO147G0120 Selaginella moellendorffii HOM05D003910 ORTHO05D004622 2.9e-160 568.9 341 80.1
Pp3c4_13690 Physcomitrium patens HOM05D003910 ORTHO05D004622 6.4e-160 567.8 341 80.4
Peaxi162Scf00288g00822 Petunia axillaris HOM05D003910 ORTHO05D004622 1.9e-159 566.2 336 84.8
Duzib116G0657 Durio zibethinus HOM05D003910 ORTHO05D004622 2.4e-159 565.8 333 83.5
Mapoly0065s0095 Marchantia polymorpha HOM05D003910 ORTHO05D004622 7.1e-159 564.3 343 79.6
Pp3c12_10600 Physcomitrium patens HOM05D003910 ORTHO05D004622 4.6e-158 561.6 341 79.8
SHI34070 Sapria himalayana HOM05D003910 ORTHO05D004622 7.8e-158 560.8 360 76.9
Aqoxy6G02874 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 2.2e-152 542.7 347 77.2
arahy.Tifrunner.gnm1.ann1.LMC2LS Arachis hypogaea HOM05D003910 ORTHO05D004622 5.4e-151 538.1 325 82.8
arahy.Tifrunner.gnm1.ann1.YMC104 Arachis hypogaea HOM05D003910 ORTHO05D004622 5.4e-151 538.1 325 82.8
Oeu059440.1 Olea europaea HOM05D003910 ORTHO05D004622 2.1e-150 536.2 329 82.4
MBI14_g37526_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 7.8e-150 534.3 318 82.1
PSO063G2338 Papaver somniferum HOM05D003910 ORTHO05D004622 1.6e-147 526.6 282 90.4
CDE10G1335 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 3.9e-141 505.4 278 86.3
SEGI_23261 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 1.9e-140 503.1 287 84.7
CARHR035900 Cardamine hirsuta HOM05D003910 ORTHO05D004622 2.2e-136 489.6 343 70.8
Thhalv10012213m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 2.4e-135 486.1 349 69.9
Carub.0001s3515 Capsella rubella HOM05D003910 ORTHO05D004622 5.4e-135 485.0 347 69.2
AT1G44318 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 2.1e-134 483.0 344 69.5
Actinidia29473 Actinidia chinensis HOM05D003910 ORTHO05D004622 2.7e-134 482.6 340 73.5
BcaB07g33952 Brassica carinata HOM05D003910 ORTHO05D004622 3.0e-133 479.2 344 68.9
AL1G52270 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 6.7e-133 478.0 346 69.9
Sp1g33510 Schrenkiella parvula HOM05D003910 ORTHO05D004622 1.9e-132 476.5 334 70.4
BcaC08g42844 Brassica carinata HOM05D003910 ORTHO05D004622 4.8e-131 471.9 340 69.4
C06p00600 Brassica napus HOM05D003910 ORTHO05D004622 4.8e-131 471.9 340 69.4
BolC6t35193H Brassica oleracea HOM05D003910 ORTHO05D004622 4.8e-131 471.9 340 69.4
BraSC36t46049Z Brassica rapa HOM05D003910 ORTHO05D004622 1.4e-130 470.3 344 68.3
A10p07550 Brassica napus HOM05D003910 ORTHO05D004622 6.9e-130 468.0 344 68.0
Glyma.06G115000 Glycine max HOM05D003910 ORTHO05D004622 1.1e-127 460.7 247 89.1
Sc16g0000040 Simmondsia chinensis HOM05D003910 ORTHO05D004622 8.7e-125 451.1 245 89.0
TPR.G35178 Trifolium pratense HOM05D003910 ORTHO05D004622 1.6e-123 446.8 348 67.0
Cre02.g091050 Chlamydomonas reinhardtii HOM05D003910 ORTHO05D004622 3.4e-121 439.1 350 59.7
MCO01G126 Micromonas commoda HOM05D003910 ORTHO05D004622 1.3e-120 437.2 344 61.6
PRCOL_00003407 Prasinoderma coloniale HOM05D003910 ORTHO05D004622 1.8e-114 416.8 312 65.7
PSO782G2793 Papaver somniferum HOM05D003910 ORTHO05D004622 1.0e-112 411.0 228 86.4
Aa31LG6G9390 Aethionema arabicum HOM05D003910 ORTHO05D004622 4.6e-110 402.1 282 71.3
Atru.chr12.1381 Acer truncatum HOM05D003910 ORTHO05D004622 3.4e-105 386.0 224 85.7
SGA_v2.0_scaffold24G10456 Striga asiatica HOM05D003910 ORTHO05D004622 4.1e-98 362.5 227 78.9
CSS0027293 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 5.3e-98 362.1 262 72.5
Psat4g053280 Pisum sativum HOM05D003910 ORTHO05D004622 4.8e-83 312.4 190 78.9
Aa31sc95G130 Aethionema arabicum HOM05D003910 ORTHO05D004622 3.5e-73 279.6 234 63.7
Actinidia03462 Actinidia chinensis HOM05D003910 ORTHO05D004622 4.2e-71 272.7 193 71.5
CBR_g49534 Chara braunii HOM05D003910 ORTHO05D000048 8.9e-69 265.0 201 66.2
Haze_27031 Corylus avellana HOM05D003910 ORTHO05D004622 2.3e-61 240.4 276 48.9
Psat0s476g0040 Pisum sativum HOM05D003910 ORTHO05D004622 1.9e-55 220.7 146 71.2
Nn3g17592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 3.6e-54 216.5 207 56.5
Cfa022049 Carpinus fangiana HOM05D003910 ORTHO05D004622 7.8e-49 198.7 311 38.3
arahy.Tifrunner.gnm1.ann1.875P1G Arachis hypogaea HOM05D003910 ORTHO05D004622 1.1e-47 194.9 139 67.6
arahy.Tifrunner.gnm1.ann1.YZW1CW Arachis hypogaea HOM05D003910 ORTHO05D004622 8.9e-45 185.3 139 64.7
Nn4g23594 Nelumbo nucifera HOM05D003910 ORTHO05D004622 1.5e-44 184.5 99 89.9
Aa31sc107G70 Aethionema arabicum HOM05D003910 ORTHO05D004622 5.8e-44 182.6 148 65.5
Psat4g053240 Pisum sativum HOM05D003910 ORTHO05D004622 1.3e-43 181.4 104 84.6
BcaB06g27098 Brassica carinata HOM05D003910 ORTHO05D004622 8.3e-43 178.7 101 81.2
BcaB05g22163 Brassica carinata HOM05D003910 ORTHO05D004622 7.8e-41 172.2 101 78.2
BcaB04g19319 Brassica carinata HOM05D003910 ORTHO05D004622 4.7e-38 162.9 100 76.0
arahy.Tifrunner.gnm1.ann1.I497ZX Arachis hypogaea HOM05D003910 ORTHO05D004622 2.4e-37 160.6 135 57.8
Oeu059446.1 Olea europaea HOM05D003910 ORTHO05D004622 4.4e-36 156.4 77 92.2
arahy.Tifrunner.gnm1.ann1.MAXD3F Arachis hypogaea HOM05D003910 ORTHO05D004622 5.8e-36 156.0 129 59.7
TAR622G0657 Trochodendron aralioides HOM05D003910 ORTHO05D004622 5.4e-34 149.4 135 60.0
Haze_27000 Corylus avellana HOM05D003910 ORTHO05D004622 1.2e-33 148.3 212 38.7
TPR.G20499 Trifolium pratense HOM05D003910 ORTHO05D004622 3.5e-33 146.7 122 64.8
arahy.Tifrunner.gnm1.ann1.FDSF2K Arachis hypogaea HOM05D003910 ORTHO05D004622 3.0e-32 143.7 120 60.8
SpUn0247_0040 Schrenkiella parvula HOM05D003910 ORTHO05D004622 5.6e-31 139.4 76 81.6
arahy.Tifrunner.gnm1.ann1.KLV74S Arachis hypogaea HOM05D003910 ORTHO05D004622 1.3e-30 138.3 135 54.8
Actinidia03463 Actinidia chinensis HOM05D003910 ORTHO05D004622 2.0e-28 131.0 72 90.3
TAR371G0308 Trochodendron aralioides HOM05D003910 ORTHO05D004622 1.1e-23 115.2 74 77.0
Lsat_1_v5_gn_8_139480 Lactuca sativa HOM05D003910 ORTHO05D004420 5.8e-20 102.8 106 52.8
Aa31sc107G60 Aethionema arabicum HOM05D003910 ORTHO05D059684 6.9e-13 79.3 49 79.6
SEGI_40510 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 1.0e-11 75.5 50 72.0
Psat1g078960 Pisum sativum HOM05D003910 ORTHO05D004622 3.2e-10 70.5 47 66.0
Psat1g079000 Pisum sativum HOM05D003910 ORTHO05D004622 3.2e-10 70.5 47 66.0
arahy.Tifrunner.gnm1.ann1.ZWJ939 Arachis hypogaea HOM05D000074 ORTHO05D004622 1.6e-09 68.2 70 52.9
Nn3g17591 Nelumbo nucifera HOM05D003910 ORTHO05D004622 1.0e-08 65.5 36 83.3
Lsat_1_v5_gn_8_143861 Lactuca sativa HOM05D003910 ORTHO05D004622 6.7e-08 62.8 45 68.9


User provided reference genes

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