Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_46.g17928 Utricularia gibba HOM05D008139 ORTHO05D009872 1.1e-54 216.5 112 100.0
TAR626G0598 Trochodendron aralioides HOM05D008139 ORTHO05D009872 1.4e-14 83.2 75 53.3
Gohir.D11G168166 Gossypium hirsutum HOM05D008139 ORTHO05D009872 4.5e-13 78.2 79 49.4
Gorai.007G179600 Gossypium raimondii HOM05D008139 ORTHO05D009872 4.5e-13 78.2 79 49.4
Thecc.04G120400 Theobroma cacao HOM05D008139 ORTHO05D009872 4.5e-13 78.2 79 53.2
SalBow8G2406 Salvia bowleyana HOM05D008139 ORTHO05D009872 7.7e-13 77.4 110 43.6
SalBow8G2479 Salvia bowleyana HOM05D008139 ORTHO05D009872 7.7e-13 77.4 110 43.6
Gohir.A11G161900 Gossypium hirsutum HOM05D008139 ORTHO05D009872 1.0e-12 77.0 79 49.4
Migut.N00505 Erythranthe guttata HOM05D008139 ORTHO05D009872 1.7e-12 76.3 105 43.8
COL.COLO4_15724 Corchorus olitorius HOM05D008139 ORTHO05D009872 2.2e-12 75.9 80 48.8
TAR626G0589 Trochodendron aralioides HOM05D008139 ORTHO05D009872 3.8e-12 75.1 75 48.0
CAN.G1139.6 Capsicum annuum HOM05D008139 ORTHO05D009872 8.5e-12 73.9 79 44.3
Duzib133G0708 Durio zibethinus HOM05D008139 ORTHO05D009872 8.5e-12 73.9 79 48.1
CSS0007440 Camellia sinensis var. sinensis HOM05D008139 ORTHO05D009872 1.1e-11 73.6 87 42.5
Hma1.2p1_0249F.1_g102430 Hydrangea macrophylla HOM05D008139 ORTHO05D009872 1.5e-11 73.2 78 43.6
SGA_v2.0_scaffold374G50235 Striga asiatica HOM05D008139 ORTHO05D009872 7.2e-11 70.9 108 38.0
Nn1g07030 Nelumbo nucifera HOM05D008139 ORTHO05D009872 9.4e-11 70.5 79 46.8
Atru.chr6.3157 Acer truncatum HOM05D008139 ORTHO05D009872 1.2e-10 70.1 81 44.4
Migut.C00700 Erythranthe guttata HOM05D008139 ORTHO05D009872 1.2e-10 70.1 77 44.2
Sabra17G0024400 Salix brachista HOM05D008139 ORTHO05D009872 1.6e-10 69.7 78 44.9
CSS0007820 Camellia sinensis var. sinensis HOM05D008139 ORTHO05D009872 2.1e-10 69.3 98 37.8
Cc10_g03180 Coffea canephora HOM05D008139 ORTHO05D009872 2.1e-10 69.3 75 44.0
SGA_v2.0_scaffold48G18067 Striga asiatica HOM05D008139 ORTHO05D009872 2.1e-10 69.3 80 46.2
DCAR_019772 Daucus carota HOM05D008139 ORTHO05D009872 4.7e-10 68.2 95 37.9
Solyc12g089070.1 Solanum lycopersicum HOM05D008139 ORTHO05D009872 4.7e-10 68.2 106 38.7
PGSC0003DMG400045933 Solanum tuberosum HOM05D008139 ORTHO05D009872 4.7e-10 68.2 80 41.2
Nitab4.5_0000790g0110 Nicotiana tabacum HOM05D008139 ORTHO05D009872 6.1e-10 67.8 79 41.8
Nitab4.5_0003246g0060 Nicotiana tabacum HOM05D008139 ORTHO05D009872 8.0e-10 67.4 79 44.3
Atru.chr6.3155 Acer truncatum HOM05D008139 ORTHO05D009872 1.0e-09 67.0 102 39.2
Potri.017G037500 Populus trichocarpa HOM05D008139 ORTHO05D009872 1.0e-09 67.0 90 41.1
RcHm_v2.0_Chr2g0126901 Rosa chinensis HOM05D008139 ORTHO05D009872 1.4e-09 66.6 94 44.7
Nitab4.5_0000110g0510 Nicotiana tabacum HOM05D008139 ORTHO05D009872 2.3e-09 65.9 79 44.3
FAN02G4280 Fragaria x ananassa HOM05D008139 ORTHO05D009872 4.0e-09 65.1 80 43.8
Dinv02745 Davidia involucrata HOM05D008139 ORTHO05D009872 5.2e-09 64.7 80 43.8
Potri.007G122500 Populus trichocarpa HOM05D008139 ORTHO05D009872 5.2e-09 64.7 77 41.6
Prupe.3G131300 Prunus persica HOM05D008139 ORTHO05D009872 8.8e-09 63.9 99 41.4
ClCG02G001810 Citrullus lanatus HOM05D008139 ORTHO05D009872 1.2e-08 63.5 77 44.2
Phvul.011G105800 Phaseolus vulgaris HOM05D008139 ORTHO05D009872 1.2e-08 63.5 78 41.0
PGR083G1842 Punica granatum HOM05D008139 ORTHO05D009872 1.2e-08 63.5 104 40.4
Sed0019249 Sechium edule HOM05D008139 ORTHO05D009872 1.2e-08 63.5 77 42.9
Rhsim06G0158900 Rhododendron simsii HOM05D008139 ORTHO05D009872 2.0e-08 62.8 104 37.5
Aqoxy4G01991 Aquilegia oxysepala HOM05D008139 ORTHO05D009872 2.6e-08 62.4 76 40.8
Peaxi162Scf00057g00045 Petunia axillaris HOM05D008139 ORTHO05D009872 5.7e-08 61.2 77 41.6
Lsat_1_v5_gn_5_103860 Lactuca sativa HOM05D008139 ORTHO05D009872 7.5e-08 60.8 75 40.0
Manes.13G103000 Manihot esculenta HOM05D008139 ORTHO05D009872 7.5e-08 60.8 99 37.4
TWI75G0563 Tripterygium wilfordii HOM05D008139 ORTHO05D009872 7.5e-08 60.8 88 36.4
CAN.G1126.30 Capsicum annuum HOM05D008139 ORTHO05D009872 9.8e-08 60.5 76 39.5
Ciclev10017826m.g Citrus clementina HOM05D008139 ORTHO05D009872 9.8e-08 60.5 100 38.0
Sopen04g033660 Solanum pennellii HOM05D008139 ORTHO05D009872 9.8e-08 60.5 76 42.1
CiPaw.04G117200 Carya illinoinensis HOM05D008139 ORTHO05D009872 1.3e-07 60.1 79 40.5
Lsat_1_v5_gn_8_128280 Lactuca sativa HOM05D008139 ORTHO05D009872 1.3e-07 60.1 76 38.2
Glyma.12G100900 Glycine max HOM05D008139 ORTHO05D009872 1.7e-07 59.7 78 41.0
Lalb_Chr03g0028851 Lupinus albus HOM05D008139 ORTHO05D009872 2.2e-07 59.3 77 41.6
Solyc04g080070.1 Solanum lycopersicum HOM05D008139 ORTHO05D009872 2.2e-07 59.3 76 40.8
TWI36G0135 Tripterygium wilfordii HOM05D008139 ORTHO05D009872 2.2e-07 59.3 81 38.3
CsaV3_7G003730 Cucumis sativus L. HOM05D008139 ORTHO05D009872 2.8e-07 58.9 81 40.7
Nitab4.5_0002296g0050 Nicotiana tabacum HOM05D008139 ORTHO05D009872 2.8e-07 58.9 104 37.5
PGSC0003DMG400005169 Solanum tuberosum HOM05D008139 ORTHO05D009872 2.8e-07 58.9 76 40.8
Cfa014432 Carpinus fangiana HOM05D008139 ORTHO05D009872 4.8e-07 58.2 97 38.1
MD07G1098300 Malus domestica HOM05D008139 ORTHO05D009872 4.8e-07 58.2 103 39.8
Lj3g0004995 Lotus japonicus HOM05D008139 ORTHO05D009872 8.3e-07 57.4 78 41.0
TPR.G19049 Trifolium pratense HOM05D008139 ORTHO05D009872 8.3e-07 57.4 78 41.0
BolC4t27657H Brassica oleracea HOM05D011011 ORTHO05D009872 1.4e-06 56.6 98 33.7
MELO3C018806.2 Cucumis melo HOM05D008139 ORTHO05D009872 1.8e-06 56.2 78 41.0
Medtr4g046720 Medicago truncatula HOM05D008139 ORTHO05D009872 2.4e-06 55.8 94 36.2
BcaC02g07938 Brassica carinata HOM05D011011 ORTHO05D009872 3.1e-06 55.5 98 33.7
QL08p033688 Quercus lobata HOM05D008139 ORTHO05D009872 3.1e-06 55.5 89 38.2
Prupe.2G122300 Prunus persica HOM05D008139 ORTHO05D009872 4.1e-06 55.1 102 37.3
C04p61740 Brassica napus HOM05D011011 ORTHO05D009872 9.1e-06 53.9 98 32.7


User provided reference genes

Program Settings