Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_46.g17910 Utricularia gibba HOM05D000116 ORTHO05D004279 4.1e-110 401.4 197 100.0
AUR62039128 Chenopodium quinoa HOM05D000116 ORTHO05D004279 2.1e-13 80.1 89 52.8
SGA_v2.0_scaffold20G09216 Striga asiatica HOM05D000116 ORTHO05D004279 4.7e-13 79.0 68 67.6
SalBow1G7958 Salvia bowleyana HOM05D000116 ORTHO05D004279 8.0e-13 78.2 87 54.0
SalBow4G3048 Salvia bowleyana HOM05D000116 ORTHO05D004279 8.0e-13 78.2 74 63.5
Eucgr.C03055 Eucalyptus grandis HOM05D000116 ORTHO05D004279 1.8e-12 77.0 120 46.7
SGA_v2.0_scaffold163G38021 Striga asiatica HOM05D000116 ORTHO05D004279 3.0e-12 76.3 82 54.9
Atru.chr7.1096 Acer truncatum HOM05D000116 ORTHO05D004279 6.7e-12 75.1 68 60.3
MSTRG.25955 Avicennia marina HOM05D000116 ORTHO05D004279 8.8e-12 74.7 81 51.9
ClCG05G017930 Citrullus lanatus HOM05D000116 ORTHO05D004279 8.8e-12 74.7 65 64.6
COL.COLO4_21076 Corchorus olitorius HOM05D000116 ORTHO05D004279 8.8e-12 74.7 67 62.7
Duzib150G0700 Durio zibethinus HOM05D000116 ORTHO05D004279 8.8e-12 74.7 67 62.7
Duzib168G2071 Durio zibethinus HOM05D000116 ORTHO05D004279 8.8e-12 74.7 67 61.2
Migut.A00126 Erythranthe guttata HOM05D000116 ORTHO05D004279 1.1e-11 74.3 78 52.6
MD15G1057800 Malus domestica HOM05D000116 ORTHO05D004279 1.1e-11 74.3 68 61.8
Thecc.09G056100 Theobroma cacao HOM05D000116 ORTHO05D004279 1.1e-11 74.3 67 62.7
Gohir.A13G187450 Gossypium hirsutum HOM05D000116 ORTHO05D004279 1.5e-11 73.9 86 50.0
Gorai.010G099100 Gossypium raimondii HOM05D000116 ORTHO05D004279 1.5e-11 73.9 79 54.4
Gohir.D06G085900 Gossypium hirsutum HOM05D000116 ORTHO05D004279 2.0e-11 73.6 79 53.2
Cpa.g.sc7.187 Carica papaya HOM05D000116 ORTHO05D004279 2.6e-11 73.2 72 59.7
TWI63G1601 Tripterygium wilfordii HOM05D000116 ORTHO05D004279 2.6e-11 73.2 70 60.0
Cfa021441 Carpinus fangiana HOM05D000116 ORTHO05D004279 3.3e-11 72.8 81 55.6
Gorai.013G220300 Gossypium raimondii HOM05D000116 ORTHO05D004279 3.3e-11 72.8 82 52.4
Manes.03G049400 Manihot esculenta HOM05D000116 ORTHO05D004279 3.3e-11 72.8 70 60.0
Psat6g021320 Pisum sativum HOM05D000116 ORTHO05D004279 3.3e-11 72.8 71 60.6
CiPaw.15G037600 Carya illinoinensis HOM05D000116 ORTHO05D004279 4.4e-11 72.4 91 46.2
Medtr1g015890 Medicago truncatula HOM05D000116 ORTHO05D004279 4.4e-11 72.4 68 57.4
TWI34G1965 Tripterygium wilfordii HOM05D000116 ORTHO05D004279 4.4e-11 72.4 91 46.2
Carub.0006s1047 Capsella rubella HOM05D000116 ORTHO05D004279 5.7e-11 72.0 65 58.5
Gohir.A05G041300 Gossypium hirsutum HOM05D000116 ORTHO05D004279 5.7e-11 72.0 67 61.2
Gorai.009G044100 Gossypium raimondii HOM05D000116 ORTHO05D004279 5.7e-11 72.0 67 61.2
MD08G1063800 Malus domestica HOM05D000116 ORTHO05D004279 5.7e-11 72.0 81 54.3
TWI32G0761 Tripterygium wilfordii HOM05D000116 ORTHO05D004279 5.7e-11 72.0 78 51.3
Gohir.D05G043000 Gossypium hirsutum HOM05D000116 ORTHO05D004279 7.4e-11 71.6 67 61.2
Dinv27998 Davidia involucrata HOM05D000116 ORTHO05D004279 9.7e-11 71.2 85 48.2
Sabra06G0175600 Salix brachista HOM05D000116 ORTHO05D004279 9.7e-11 71.2 68 58.8
THA.LOC104804440 Tarenaya hassleriana HOM05D000116 ORTHO05D004279 9.7e-11 71.2 65 64.6
BcaB01g05439 Brassica carinata HOM05D000116 ORTHO05D004279 1.3e-10 70.9 65 56.9
A03p05310 Brassica napus HOM05D000116 ORTHO05D004279 1.3e-10 70.9 65 56.9
C03p06090 Brassica napus HOM05D000116 ORTHO05D004279 1.3e-10 70.9 65 56.9
BolC3t13120H Brassica oleracea HOM05D000116 ORTHO05D004279 1.3e-10 70.9 65 56.9
BraA03t09869Z Brassica rapa HOM05D000116 ORTHO05D004279 1.3e-10 70.9 65 56.9
CARHR201220 Cardamine hirsuta HOM05D000116 ORTHO05D004279 1.3e-10 70.9 65 58.5
Gohir.A06G086400 Gossypium hirsutum HOM05D000116 ORTHO05D004279 1.3e-10 70.9 79 53.2
Ah.10g034190 Amaranthus hybridus HOM05D000116 ORTHO05D004279 1.7e-10 70.5 69 56.5
A10p25820 Brassica napus HOM05D000116 ORTHO05D004279 1.7e-10 70.5 65 60.0
C09p64890 Brassica napus HOM05D000116 ORTHO05D004279 1.7e-10 70.5 65 60.0
BolC9t59320H Brassica oleracea HOM05D000116 ORTHO05D004279 1.7e-10 70.5 65 60.0
BraA10t44646Z Brassica rapa HOM05D000116 ORTHO05D004279 1.7e-10 70.5 65 60.0
Glyma.04G051900 Glycine max HOM05D000116 ORTHO05D004279 1.7e-10 70.5 65 56.9
Lj5g0022417 Lotus japonicus HOM05D000116 ORTHO05D004279 1.7e-10 70.5 75 56.0
Sp6g31660 Schrenkiella parvula HOM05D000116 ORTHO05D004279 1.7e-10 70.5 65 58.5
AT5G11930 Arabidopsis thaliana HOM05D000116 ORTHO05D004279 2.2e-10 70.1 65 56.9
AUR62044308 Chenopodium quinoa HOM05D000116 ORTHO05D004279 2.8e-10 69.7 71 57.7
Cc08_g10800 Coffea canephora HOM05D000116 ORTHO05D004279 2.8e-10 69.7 91 48.4
Thhalv10015764m.g Eutrema salsugineum HOM05D000116 ORTHO05D004279 2.8e-10 69.7 65 55.4
Potri.006G226900 Populus trichocarpa HOM05D000116 ORTHO05D004279 2.8e-10 69.7 67 59.7
Actinidia01224 Actinidia chinensis HOM05D000116 ORTHO05D004279 3.7e-10 69.3 88 47.7
RcHm_v2.0_Chr6g0311131 Rosa chinensis HOM05D000116 ORTHO05D004279 3.7e-10 69.3 72 54.2
AL6G22690 Arabidopsis lyrata HOM05D000116 ORTHO05D004279 4.8e-10 68.9 65 56.9
Lsat_1_v5_gn_5_46001 Lactuca sativa HOM05D000116 ORTHO05D004279 4.8e-10 68.9 68 57.4
AL7G18630 Arabidopsis lyrata HOM05D000116 ORTHO05D004279 6.3e-10 68.6 67 56.7
MELO3C010749.2 Cucumis melo HOM05D000116 ORTHO05D004279 6.3e-10 68.6 66 60.6
CsaV3_2G025520 Cucumis sativus L. HOM05D000116 ORTHO05D004279 6.3e-10 68.6 66 60.6
Lalb_Chr24g0399721 Lupinus albus HOM05D000116 ORTHO05D004279 6.3e-10 68.6 75 54.7
Manes.16G081400 Manihot esculenta HOM05D000116 ORTHO05D004279 6.3e-10 68.6 70 57.1
Sed0017281 Sechium edule HOM05D000116 ORTHO05D004279 6.3e-10 68.6 65 60.0
VMungo1309G3148 Vigna mungo HOM05D000116 ORTHO05D004279 6.3e-10 68.6 65 53.8
AUR62009127 Chenopodium quinoa HOM05D000116 ORTHO05D004279 8.2e-10 68.2 71 57.7
Gohir.D13G194300 Gossypium hirsutum HOM05D000116 ORTHO05D004279 8.2e-10 68.2 82 48.8
Lalb_Chr14g0366361 Lupinus albus HOM05D000116 ORTHO05D004279 8.2e-10 68.2 65 56.9
Haze_18166 Corylus avellana HOM05D000116 ORTHO05D004279 1.1e-09 67.8 66 57.6
PGR044G0299 Punica granatum HOM05D000116 ORTHO05D004279 1.1e-09 67.8 73 52.1
Rhsim07G0141900 Rhododendron simsii HOM05D000181 ORTHO05D004115 1.1e-09 67.8 65 58.5
MELO3C016878.2 Cucumis melo HOM05D000116 ORTHO05D004279 1.4e-09 67.4 65 58.5
CsaV3_4G035710 Cucumis sativus L. HOM05D000116 ORTHO05D004279 1.4e-09 67.4 65 58.5
FvH4_2g31700 Fragaria vesca HOM05D000116 ORTHO05D004279 1.4e-09 67.4 69 55.1
FAN15G1024 Fragaria x ananassa HOM05D000116 ORTHO05D004279 1.4e-09 67.4 69 55.1
FAN27G0872 Fragaria x ananassa HOM05D000116 ORTHO05D004279 1.4e-09 67.4 69 55.1
Gohir.A08G248000 Gossypium hirsutum HOM05D000116 ORTHO05D004279 1.4e-09 67.4 83 49.4
Solyc08g062970.1 Solanum lycopersicum HOM05D000116 ORTHO05D004279 1.4e-09 67.4 66 56.1
CSS0027361 Camellia sinensis var. sinensis HOM05D000116 ORTHO05D004279 1.8e-09 67.0 65 55.4
DCAR_004409 Daucus carota HOM05D000116 ORTHO05D004279 1.8e-09 67.0 66 59.1
Glyma.14G096700 Glycine max HOM05D000116 ORTHO05D004279 1.8e-09 67.0 65 56.9
Medtr3g104510 Medicago truncatula HOM05D000116 ORTHO05D004279 1.8e-09 67.0 65 55.4
Phvul.009G078100 Phaseolus vulgaris HOM05D000116 ORTHO05D004279 1.8e-09 67.0 65 52.3
CARHR241050 Cardamine hirsuta HOM05D000116 ORTHO05D004279 2.4e-09 66.6 70 54.3
ClCG08G017070 Citrullus lanatus HOM05D000116 ORTHO05D004279 2.4e-09 66.6 66 59.1
QL02p000969 Quercus lobata HOM05D000116 ORTHO05D004279 2.4e-09 66.6 69 55.1
AT4G33040 Arabidopsis thaliana HOM05D000116 ORTHO05D004279 3.1e-09 66.2 67 55.2
Ciclev10009836m.g Citrus clementina HOM05D000116 ORTHO05D004279 3.1e-09 66.2 72 52.8
Glyma.17G227700 Glycine max HOM05D000116 ORTHO05D004279 3.1e-09 66.2 65 56.9
CANSAT25G3404 Cannabis sativa HOM05D000116 ORTHO05D004279 4.1e-09 65.9 80 46.2
FAN24G0498 Fragaria x ananassa HOM05D000116 ORTHO05D004279 4.1e-09 65.9 69 53.6
Ca_13155_v3 Cicer arietinum L. HOM05D000116 ORTHO05D004279 5.3e-09 65.5 66 56.1
Thhalv10026405m.g Eutrema salsugineum HOM05D000116 ORTHO05D004279 5.3e-09 65.5 67 56.7
Solyc11g069940.1 Solanum lycopersicum HOM05D000116 ORTHO05D004279 5.3e-09 65.5 67 53.7
Sopen11g028620 Solanum pennellii HOM05D000116 ORTHO05D004279 5.3e-09 65.5 67 53.7
THA.LOC104824668 Tarenaya hassleriana HOM05D000116 ORTHO05D004279 5.3e-09 65.5 65 56.9
HanXRQChr06g0173921 Helianthus annuus HOM05D000116 ORTHO05D004279 7.0e-09 65.1 67 55.2
Oeu003992.1 Olea europaea HOM05D000116 ORTHO05D004279 7.0e-09 65.1 65 60.0
Oeu036328.1 Olea europaea HOM05D000116 ORTHO05D004279 7.0e-09 65.1 81 48.1
PGSC0003DMG400008224 Solanum tuberosum HOM05D000116 ORTHO05D004279 7.0e-09 65.1 70 51.4
PGSC0003DMG400019671 Solanum tuberosum HOM05D000116 ORTHO05D004279 7.0e-09 65.1 69 53.6
CiPaw.16G027800 Carya illinoinensis HOM05D000116 ORTHO05D004279 9.1e-09 64.7 69 56.5
Prupe.1G410500 Prunus persica HOM05D000116 ORTHO05D004279 9.1e-09 64.7 75 50.7
Sed0002881 Sechium edule HOM05D000116 ORTHO05D004279 9.1e-09 64.7 66 59.1
Sc09g0009900 Simmondsia chinensis HOM05D000116 ORTHO05D004279 9.1e-09 64.7 68 57.4
arahy.Tifrunner.gnm1.ann1.0L68TT Arachis hypogaea HOM05D000116 ORTHO05D004279 1.2e-08 64.3 65 53.8
EL10Ac2g03835 Beta vulgaris HOM05D000116 ORTHO05D004279 1.2e-08 64.3 65 55.4
Carub.0007s0744 Capsella rubella HOM05D000116 ORTHO05D004279 1.2e-08 64.3 68 52.9
CAN.G309.47 Capsicum annuum HOM05D000116 ORTHO05D004279 1.2e-08 64.3 74 51.4
Gohir.D08G269100 Gossypium hirsutum HOM05D000116 ORTHO05D004279 1.2e-08 64.3 85 49.4
Gorai.004G286800 Gossypium raimondii HOM05D000116 ORTHO05D004279 1.2e-08 64.3 85 49.4
Sed0001600 Sechium edule HOM05D000116 ORTHO05D004279 1.2e-08 64.3 71 52.1
Aqoxy7G01187 Aquilegia oxysepala HOM05D000116 ORTHO05D004279 1.6e-08 63.9 79 45.6
A03p61770 Brassica napus HOM05D000116 ORTHO05D004279 1.6e-08 63.9 67 52.2
BraA03t15214Z Brassica rapa HOM05D000116 ORTHO05D004279 1.6e-08 63.9 67 52.2
vmacro00131 Vaccinium macrocarpon HOM05D000116 ORTHO05D004279 1.6e-08 63.9 66 57.6
ECA240G1788 Erigeron canadensis HOM05D000116 ORTHO05D004279 2.0e-08 63.5 64 56.2
Glyma.06G052600 Glycine max HOM05D000116 ORTHO05D004279 2.0e-08 63.5 65 50.8
TPR.G13181 Trifolium pratense HOM05D000116 ORTHO05D004279 2.0e-08 63.5 63 57.1
Aa31LG3G15290 Aethionema arabicum HOM05D000116 ORTHO05D004279 2.6e-08 63.2 65 52.3
BcaC09g52102 Brassica carinata HOM05D000116 ORTHO05D004279 2.6e-08 63.2 67 52.2
C01p05630 Brassica napus HOM05D000116 ORTHO05D004279 2.6e-08 63.2 67 52.2
BolC1t00543H Brassica oleracea HOM05D000116 ORTHO05D004279 2.6e-08 63.2 67 52.2
BolC7t46391H Brassica oleracea HOM05D000116 ORTHO05D004279 2.6e-08 63.2 70 52.9
Ca_15859_v3 Cicer arietinum L. HOM05D000116 ORTHO05D004279 2.6e-08 63.2 65 52.3
Lalb_Chr08g0245031 Lupinus albus HOM05D000116 ORTHO05D004279 2.6e-08 63.2 65 49.2
PSO063G6125 Papaver somniferum HOM05D000116 ORTHO05D004279 2.6e-08 63.2 64 51.6
PSO832G1211 Papaver somniferum HOM05D000116 ORTHO05D004279 2.6e-08 63.2 64 51.6
Phvul.001G036900 Phaseolus vulgaris HOM05D000116 ORTHO05D004279 2.6e-08 63.2 65 53.8
BcaNung02152 Brassica carinata HOM05D000116 ORTHO05D004279 3.5e-08 62.8 67 52.2
C07p59480 Brassica napus HOM05D000116 ORTHO05D004279 3.5e-08 62.8 67 52.2
Rhsim11G0043200 Rhododendron simsii HOM05D000116 ORTHO05D004279 3.5e-08 62.8 68 58.8
A01p05150 Brassica napus HOM05D000116 ORTHO05D004279 4.5e-08 62.4 67 53.7
BraA01t00498Z Brassica rapa HOM05D000116 ORTHO05D004279 4.5e-08 62.4 67 53.7
ECA246G3842 Erigeron canadensis HOM05D000116 ORTHO05D004279 4.5e-08 62.4 66 53.0
VMungo0647G0010 Vigna mungo HOM05D000116 ORTHO05D004279 4.5e-08 62.4 65 53.8
TAR636G1297 Trochodendron aralioides HOM05D000116 ORTHO05D004279 5.9e-08 62.0 66 51.5
C03p86860 Brassica napus HOM05D000116 ORTHO05D004279 7.7e-08 61.6 70 52.9
BolC3t20979H Brassica oleracea HOM05D000116 ORTHO05D004279 7.7e-08 61.6 70 52.9
Dinv22885 Davidia involucrata HOM05D000116 ORTHO05D004279 7.7e-08 61.6 65 55.4
Lsat_1_v5_gn_3_24981 Lactuca sativa HOM05D000116 ORTHO05D004279 7.7e-08 61.6 64 54.7
Nitab4.5_0008991g0010 Nicotiana tabacum HOM05D000116 ORTHO05D004279 7.7e-08 61.6 73 50.7
TAR383G0170 Trochodendron aralioides HOM05D000116 ORTHO05D004279 7.7e-08 61.6 65 53.8
DCAR_007731 Daucus carota HOM05D000116 ORTHO05D004279 1.0e-07 61.2 85 43.5
HanXRQChr17g0538511 Helianthus annuus HOM05D000116 ORTHO05D004279 1.0e-07 61.2 65 55.4
Nitab4.5_0000227g0050 Nicotiana tabacum HOM05D000116 ORTHO05D004279 1.0e-07 61.2 67 53.7
CAN.G9.18 Capsicum annuum HOM05D000116 ORTHO05D004279 1.3e-07 60.8 71 50.7
Lj1g0018190 Lotus japonicus HOM05D000116 ORTHO05D004279 1.3e-07 60.8 65 52.3
Nitab4.5_0000865g0030 Nicotiana tabacum HOM05D000116 ORTHO05D004279 1.3e-07 60.8 73 50.7
Oeu018635.2 Olea europaea HOM05D000116 ORTHO05D004279 1.3e-07 60.8 76 46.1
Sed0022480 Sechium edule HOM05D000116 ORTHO05D004279 1.3e-07 60.8 66 54.5
TAR624G0239 Trochodendron aralioides HOM05D000116 ORTHO05D004279 1.3e-07 60.8 62 50.0
Nn8g38816 Nelumbo nucifera HOM05D000116 ORTHO05D004279 2.2e-07 60.1 68 51.5
Peaxi162Scf00327g00052 Petunia axillaris HOM05D000116 ORTHO05D004279 2.2e-07 60.1 79 44.3
A08p17810 Brassica napus HOM05D000116 ORTHO05D004279 2.9e-07 59.7 67 52.2
BraA08t33731Z Brassica rapa HOM05D000116 ORTHO05D004279 2.9e-07 59.7 67 52.2
HanXRQChr03g0082101 Helianthus annuus HOM05D000116 ORTHO05D004279 3.8e-07 59.3 64 53.1
MBI04_g31696_MAGBIO Magnolia biondii HOM05D000116 ORTHO05D004279 3.8e-07 59.3 64 53.1
MBI04_g34757_MAGBIO Magnolia biondii HOM05D000116 ORTHO05D004279 3.8e-07 59.3 64 53.1
Sp7g30800 Schrenkiella parvula HOM05D000116 ORTHO05D004279 3.8e-07 59.3 67 52.2
BcaB03g12772 Brassica carinata HOM05D000116 ORTHO05D004279 5.0e-07 58.9 70 51.4
Eucgr.C00663 Eucalyptus grandis HOM05D000116 ORTHO05D004279 6.5e-07 58.5 65 55.4
Hma1.2p1_0544F.1_g175710 Hydrangea macrophylla HOM05D000116 ORTHO05D004279 6.5e-07 58.5 70 50.0
MBI01_g20339_MAGBIO Magnolia biondii HOM05D000116 ORTHO05D004279 6.5e-07 58.5 68 52.9
Nn6g35506 Nelumbo nucifera HOM05D000116 ORTHO05D004279 6.5e-07 58.5 72 50.0
Sopen08g018550 Solanum pennellii HOM05D000116 ORTHO05D004279 1.1e-06 57.8 70 48.6
Sabra17G0013500 Salix brachista HOM05D000116 ORTHO05D002933 5.5e-06 55.5 70 50.0
Actinidia18179 Actinidia chinensis HOM05D000116 ORTHO05D004279 7.2e-06 55.1 62 48.4
CDE05G0508 Ceratophyllum demersum HOM05D000116 ORTHO05D004279 7.2e-06 55.1 75 42.7
Nitab4.5_0005815g0010 Nicotiana tabacum HOM05D000116 ORTHO05D000133 9.4e-06 54.7 69 42.0
HPP92_026779 Vanilla planifolia HOM05D000116 ORTHO05D004279 9.4e-06 54.7 81 45.7


User provided reference genes

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